RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	BCL2L13	Q9BXK5	485 aa		6.68	□□□□□ -1.34
RYR3-223	ENST00000636845	BCL11B	Q9C0K0	894 aa	Predicted RBP	6.68	□□□□□ -1.34
RYR3-223	ENST00000636845	CBX1	P83916	185 aa		6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	NEUROD2	Q15784	382 aa		6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	PPP4R3B	Q5MIZ7	849 aa		6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	DISP3	Q9P2K9	1392 aa		6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	KIF20A	O95235	890 aa		6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	ZSCAN20	P17040	1043 aa	Predicted RBP	6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	MCM5	P33992	734 aa		6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	FTSJ3	Q8IY81	847 aa	Known RBP	6.67	□□□□□ -1.34
RYR3-223	ENST00000636845	EPRS	P07814	1512 aa	Known RBP	6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	HMGXB3	Q12766	1538 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	ZNF608	Q9ULD9	1512 aa	Predicted RBP	6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	CADPS	Q9ULU8	1353 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	SSFA2	P28290	1259 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	SNX21	Q969T3	373 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	GTPBP4	Q9BZE4	634 aa	Known RBP	6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	ARHGEF12	Q9NZN5	1544 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	NGEF	Q8N5V2	710 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	CCDC39	Q9UFE4	941 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	CTTNBP2	Q8WZ74	1663 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	LETM1	O95202	739 aa	Predicted RBP	6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	DDIT3	P35638	169 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	MCTP1	Q6DN14	999 aa		6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	NAP1L2	Q9ULW6	460 aa	Predicted RBP	6.66	□□□□□ -1.34
RYR3-223	ENST00000636845	CDK13	Q14004	1512 aa	Known RBP	6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	ANKRD50	Q9ULJ7	1429 aa		6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	RLBP1	P12271	317 aa		6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	FOXD4L5	Q5VV16	416 aa	Predicted RBP	6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	TESK2	Q96S53	571 aa		6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	VIRMA	Q69YN4	1812 aa	Known RBP	6.65	□□□□□ -1.34
RYR3-223	ENST00000636845	GAPVD1	Q14C86	1478 aa		6.65	□□□□□ -1.34
RYR3-223	ENST00000636845		K7ELQ4	463 aa	Predicted RBP	6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	BAG4	O95429	457 aa	Known RBP	6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	GTF2E1	P29083	439 aa	Predicted RBP	6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	KIAA2012	Q0VF49	1180 aa		6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	ZSCAN23	Q3MJ62	389 aa		6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	CHMP4B	Q9H444	224 aa	Known RBP	6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	KIAA0586	Q9BVV6	1533 aa		6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	LRRIQ1	Q96JM4	1722 aa		6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	ERBIN	Q96RT1	1412 aa		6.65	□□□□□ -1.35
RYR3-223	ENST00000636845		E9PCH4	1651 aa		6.65	□□□□□ -1.35
RYR3-223	ENST00000636845	RARS	P54136	660 aa	Known RBP	6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	ZNF445	P59923	1031 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	HMGN5	P82970	282 aa	Known RBP	6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	RBSN	Q9H1K0	784 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	TNN	Q9UQP3	1299 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	COL17A1	Q9UMD9	1497 aa	Predicted RBP	6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	PRIM1	P49642	420 aa	Known RBP	6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	RBM25	P49756	843 aa	Known RBP	6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	STAC3	Q96MF2	364 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	DNMT1	P26358	1616 aa	Known RBP	6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	NCOA3	Q9Y6Q9	1424 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	SAMD9	Q5K651	1589 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	ABCA10	Q8WWZ4	1543 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	CUL7	Q14999	1698 aa		6.64	□□□□□ -1.35
RYR3-223	ENST00000636845	CAMSAP2	Q08AD1	1489 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	CDCA8	Q53HL2	280 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	WWC1	Q8IX03	1113 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	AKT1S1	Q96B36	256 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	PDLIM2	Q96JY6	352 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	CCDC144A	A2RUR9	1427 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	KIF21A	Q7Z4S6	1674 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	CC2D2A	Q9P2K1	1620 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	RTEL1-TNFRSF6B	F6WH68	1400 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	RGL2	O15211	777 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	MYRIP	Q8NFW9	859 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	SCAPER	Q9BY12	1400 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	MVP	Q14764	893 aa	Known RBP	6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	TAF3	Q5VWG9	929 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	RNF214	Q8ND24	703 aa		6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	RRP7A	Q9Y3A4	280 aa	Known RBP	6.63	□□□□□ -1.35
RYR3-223	ENST00000636845	TDRD9	Q8NDG6	1382 aa	Known RBP	6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	TSPY4	P0CV99	314 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	TSPY10	P0CW01	314 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	NUCB2	P80303	420 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	ZKSCAN2	Q63HK3	967 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	ZNF771	Q7L3S4	317 aa	Predicted RBP	6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	DZIP1L	Q8IYY4	767 aa	Known RBP	6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	TSC1	Q92574	1164 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	PRIMPOL	Q96LW4	560 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	KIF3A	Q9Y496	699 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	NES	P48681	1621 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	PRPF40A	O75400	957 aa	Known RBP	6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	ITPRIP	Q8IWB1	547 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	GAS2L2	Q8NHY3	880 aa		6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	CGN	Q9P2M7	1197 aa	Known RBP	6.62	□□□□□ -1.35
RYR3-223	ENST00000636845	PRAG1	Q86YV5	1406 aa		6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	SPDYE4	A6NLX3	237 aa		6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	LNPK	Q9C0E8	428 aa		6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	DNAJC5	Q9H3Z4	198 aa		6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	POLA1	P09884	1462 aa	Predicted RBP	6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	SYCE3	A1L190	88 aa		6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	CD2BP2	O95400	341 aa	Known RBP	6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	VASP	P50552	380 aa	Predicted RBP	6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	PDCL2	Q8N4E4	241 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms