RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	SBNO2	Q9Y2G9	1366 aa		13.87	□□□□□ -0.19
CHD2-223	ENST00000636306	MYOM1	P52179	1685 aa		13.87	□□□□□ -0.19
CHD2-223	ENST00000636306	NLRP13	Q86W25	1043 aa		13.86	□□□□□ -0.19
CHD2-223	ENST00000636306	INSR	P06213	1382 aa		13.86	□□□□□ -0.19
CHD2-223	ENST00000636306	PIK3C2G	O75747	1445 aa		13.85	□□□□□ -0.19
CHD2-223	ENST00000636306	RAPGEF3	O95398	923 aa		13.85	□□□□□ -0.19
CHD2-223	ENST00000636306	TSPOAP1	O95153	1857 aa		13.84	□□□□□ -0.19
CHD2-223	ENST00000636306	FSD2	A1L4K1	749 aa		13.83	□□□□□ -0.19
CHD2-223	ENST00000636306	PDE3B	Q13370	1112 aa		13.83	□□□□□ -0.19
CHD2-223	ENST00000636306	FAM161A	Q3B820	660 aa		13.83	□□□□□ -0.19
CHD2-223	ENST00000636306	MAP7D2	Q96T17	732 aa		13.83	□□□□□ -0.19
CHD2-223	ENST00000636306	LRPPRC	P42704	1394 aa	Known RBP	13.83	□□□□□ -0.19
CHD2-223	ENST00000636306	YEATS2	Q9ULM3	1422 aa		13.83	□□□□□ -0.2
CHD2-223	ENST00000636306	QRICH2	Q9H0J4	1663 aa		13.83	□□□□□ -0.2
CHD2-223	ENST00000636306		A0A0U1RQG5	324 aa	Predicted RBP	13.83	□□□□□ -0.2
CHD2-223	ENST00000636306	CFAP65	Q6ZU64	1925 aa	Known RBP	13.83	□□□□□ -0.2
CHD2-223	ENST00000636306	NEXMIF	Q5QGS0	1516 aa		13.82	□□□□□ -0.2
CHD2-223	ENST00000636306	ARHGEF40	Q8TER5	1519 aa		13.82	□□□□□ -0.2
CHD2-223	ENST00000636306	SLC4A3	P48751	1232 aa		13.82	□□□□□ -0.2
CHD2-223	ENST00000636306	FAM69C	Q0P6D2	419 aa		13.82	□□□□□ -0.2
CHD2-223	ENST00000636306	RCAN3	Q9UKA8	241 aa		13.82	□□□□□ -0.2
CHD2-223	ENST00000636306	PPP6R1	Q9UPN7	881 aa		13.82	□□□□□ -0.2
CHD2-223	ENST00000636306	ASXL1	Q8IXJ9	1541 aa		13.82	□□□□□ -0.2
CHD2-223	ENST00000636306	GOLGA6L3	A6NEY3	463 aa		13.81	□□□□□ -0.2
CHD2-223	ENST00000636306	POGK	Q9P215	609 aa		13.81	□□□□□ -0.2
CHD2-223	ENST00000636306	NPC1L1	Q9UHC9	1359 aa		13.81	□□□□□ -0.2
CHD2-223	ENST00000636306	SLC52A1	Q9NWF4	448 aa		13.81	□□□□□ -0.2
CHD2-223	ENST00000636306	ZFYVE9	O95405	1425 aa		13.81	□□□□□ -0.2
CHD2-223	ENST00000636306	KIF13A	Q9H1H9	1805 aa		13.8	□□□□□ -0.2
CHD2-223	ENST00000636306	CHGA	P10645	457 aa	Known RBP	13.8	□□□□□ -0.2
CHD2-223	ENST00000636306	PNISR	Q8TF01	805 aa	Known RBP	13.8	□□□□□ -0.2
CHD2-223	ENST00000636306	ISY1	Q9ULR0	285 aa	Known RBP	13.8	□□□□□ -0.2
CHD2-223	ENST00000636306	ADGRF5	Q8IZF2	1346 aa		13.8	□□□□□ -0.2
CHD2-223	ENST00000636306	ADGRB1	O14514	1584 aa		13.79	□□□□□ -0.2
CHD2-223	ENST00000636306	PER1	O15534	1290 aa	Predicted RBP	13.79	□□□□□ -0.2
CHD2-223	ENST00000636306	XRCC6	P12956	609 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
CHD2-223	ENST00000636306	TERF1	P54274	439 aa		13.79	□□□□□ -0.2
CHD2-223	ENST00000636306	PANK3	Q9H999	370 aa		13.79	□□□□□ -0.2
CHD2-223	ENST00000636306	KNSTRN	Q9Y448	316 aa		13.78	□□□□□ -0.2
CHD2-223	ENST00000636306	ERVK-7	P63135	1459 aa		13.78	□□□□□ -0.2
CHD2-223	ENST00000636306	VGF	O15240	615 aa	Predicted RBP	13.78	□□□□□ -0.2
CHD2-223	ENST00000636306	TMEM131L	A2VDJ0	1609 aa		13.77	□□□□□ -0.2
CHD2-223	ENST00000636306	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.77	□□□□□ -0.2
CHD2-223	ENST00000636306	CFAP70	Q5T0N1	1121 aa		13.77	□□□□□ -0.21
CHD2-223	ENST00000636306	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.77	□□□□□ -0.21
CHD2-223	ENST00000636306	PHF23	Q9BUL5	403 aa	Predicted RBP	13.77	□□□□□ -0.21
CHD2-223	ENST00000636306	CNGB1	Q14028	1251 aa	Predicted RBP	13.76	□□□□□ -0.21
CHD2-223	ENST00000636306	CLTC	Q00610	1675 aa	Known RBP	13.76	□□□□□ -0.21
CHD2-223	ENST00000636306	ESPN	B1AK53	854 aa		13.76	□□□□□ -0.21
CHD2-223	ENST00000636306	MRE11	P49959	708 aa		13.76	□□□□□ -0.21
CHD2-223	ENST00000636306	BECN1	Q14457	450 aa		13.76	□□□□□ -0.21
CHD2-223	ENST00000636306	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.76	□□□□□ -0.21
CHD2-223	ENST00000636306	C14orf93	Q9H972	538 aa	Known RBP	13.76	□□□□□ -0.21
CHD2-223	ENST00000636306	USP32	Q8NFA0	1604 aa		13.75	□□□□□ -0.21
CHD2-223	ENST00000636306	MYO5B	Q9ULV0	1848 aa		13.75	□□□□□ -0.21
CHD2-223	ENST00000636306	NCL	P19338	710 aa	Known RBP	13.75	□□□□□ -0.21
CHD2-223	ENST00000636306	C8orf34	Q49A92	452 aa		13.75	□□□□□ -0.21
CHD2-223	ENST00000636306	KDM2B	Q8NHM5	1336 aa		13.75	□□□□□ -0.21
CHD2-223	ENST00000636306	BLM	P54132	1417 aa	Predicted RBP	13.74	□□□□□ -0.21
CHD2-223	ENST00000636306	SPATA31D1	Q6ZQQ2	1576 aa		13.73	□□□□□ -0.21
CHD2-223	ENST00000636306	PDIA4	P13667	645 aa	Known RBP	13.72	□□□□□ -0.21
CHD2-223	ENST00000636306	PUS7	Q96PZ0	661 aa	Known RBP	13.72	□□□□□ -0.21
CHD2-223	ENST00000636306	CC2D1B	Q5T0F9	858 aa	Known RBP	13.71	□□□□□ -0.21
CHD2-223	ENST00000636306	MTERF4	Q7Z6M4	381 aa	Known RBP	13.71	□□□□□ -0.21
CHD2-223	ENST00000636306	RGS3	P49796	1198 aa		13.71	□□□□□ -0.22
CHD2-223	ENST00000636306	UTP14C	Q5TAP6	766 aa	Known RBP	13.69	□□□□□ -0.22
CHD2-223	ENST00000636306	NINL	Q9Y2I6	1382 aa		13.69	□□□□□ -0.22
CHD2-223	ENST00000636306	VIRMA	Q69YN4	1812 aa	Known RBP	13.69	□□□□□ -0.22
CHD2-223	ENST00000636306	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.68	□□□□□ -0.22
CHD2-223	ENST00000636306	MYH16	Q9H6N6	1097 aa		13.68	□□□□□ -0.22
CHD2-223	ENST00000636306	IDI1	Q13907	227 aa		13.67	□□□□□ -0.22
CHD2-223	ENST00000636306	WDR43	Q15061	677 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
CHD2-223	ENST00000636306	CRBN	Q96SW2	442 aa		13.67	□□□□□ -0.22
CHD2-223	ENST00000636306	EVC2	Q86UK5	1308 aa		13.67	□□□□□ -0.22
CHD2-223	ENST00000636306	PPP2R1A	P30153	589 aa		13.66	□□□□□ -0.22
CHD2-223	ENST00000636306	ANTXR1	Q9H6X2	564 aa		13.66	□□□□□ -0.22
CHD2-223	ENST00000636306	NSD2	O96028	1365 aa		13.65	□□□□□ -0.22
CHD2-223	ENST00000636306	TRAK1	Q9UPV9	953 aa		13.65	□□□□□ -0.22
CHD2-223	ENST00000636306	TULP4	Q9NRJ4	1543 aa		13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	OFD1	O75665	1012 aa		13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	KIAA1211	Q6ZU35	1233 aa		13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	TRIM44	Q96DX7	344 aa	Predicted RBP	13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	PANK2	Q9BZ23	570 aa		13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	ESF1	Q9H501	851 aa	Known RBP	13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	DLC1	Q96QB1	1528 aa		13.64	□□□□□ -0.23
CHD2-223	ENST00000636306	GRPEL1	Q9HAV7	217 aa		13.63	□□□□□ -0.23
CHD2-223	ENST00000636306	STAG3	Q9UJ98	1225 aa		13.63	□□□□□ -0.23
CHD2-223	ENST00000636306	ALK	Q9UM73	1620 aa		13.63	□□□□□ -0.23
CHD2-223	ENST00000636306	MCM4	P33991	863 aa		13.63	□□□□□ -0.23
CHD2-223	ENST00000636306	TRH	P20396	242 aa	Predicted RBP	13.62	□□□□□ -0.23
CHD2-223	ENST00000636306	NSD3	Q9BZ95	1437 aa		13.62	□□□□□ -0.23
CHD2-223	ENST00000636306	A2ML1	A8K2U0	1454 aa		13.62	□□□□□ -0.23
CHD2-223	ENST00000636306	ATAD2	Q6PL18	1390 aa		13.61	□□□□□ -0.23
CHD2-223	ENST00000636306	NGEF	Q8N5V2	710 aa		13.61	□□□□□ -0.23
CHD2-223	ENST00000636306	PTPRM	P28827	1452 aa		13.61	□□□□□ -0.23
CHD2-223	ENST00000636306	USP19	O94966	1318 aa		13.61	□□□□□ -0.23
CHD2-223	ENST00000636306	ERBB4	Q15303	1308 aa		13.61	□□□□□ -0.23
CHD2-223	ENST00000636306	ANKRD36B	Q8N2N9	1353 aa		13.61	□□□□□ -0.23
CHD2-223	ENST00000636306	ANKRD26	Q9UPS8	1709 aa		13.61	□□□□□ -0.23

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