RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 NUDCQ9Y266 331 aa5.46□□□□□ -1.54
SCN2A-210ENST00000636135 LMTK2Q8IWU2 1503 aa5.46□□□□□ -1.54
SCN2A-210ENST00000636135 GPATCH8Q9UKJ3 1502 aaKnown RBP5.46□□□□□ -1.54
SCN2A-210ENST00000636135 CCDC7Q96M83 1385 aa5.46□□□□□ -1.54
SCN2A-210ENST00000636135 MYO7AQ13402 2215 aa5.46□□□□□ -1.54
SCN2A-210ENST00000636135 RRP9O43818 475 aaKnown RBP5.46□□□□□ -1.54
SCN2A-210ENST00000636135 TPM2P07951 284 aa5.46□□□□□ -1.54
SCN2A-210ENST00000636135 ARID3AQ99856 593 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 TNNT3P45378 269 aaPredicted RBP5.45□□□□□ -1.54
SCN2A-210ENST00000636135 PDCL2Q8N4E4 241 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 ACBD3Q9H3P7 528 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 KDM2AQ9Y2K7 1162 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 CCP110O43303 1012 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 HMGB1P1B2RPK0 211 aaPredicted RBP5.45□□□□□ -1.54
SCN2A-210ENST00000636135 PPP1R15AO75807 674 aaPredicted RBP5.45□□□□□ -1.54
SCN2A-210ENST00000636135 KCNH8Q96L42 1107 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 ICE1Q9Y2F5 2266 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 KIF7Q2M1P5 1343 aa5.45□□□□□ -1.54
SCN2A-210ENST00000636135 LRRFIP1Q32MZ4 808 aaKnown RBP5.45□□□□□ -1.54
SCN2A-210ENST00000636135 PPP1R1BQ9UD71 204 aaPredicted RBP5.45□□□□□ -1.54
SCN2A-210ENST00000636135 ATAD2Q6PL18 1390 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 SAMD9LQ8IVG5 1584 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 USP8P40818 1118 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 NCOA1Q15788 1441 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 FRMPD1Q5SYB0 1578 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 HECW2Q9P2P5 1572 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 KIF15Q9NS87 1388 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 REREQ9P2R6 1566 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 PES1O00541 588 aaKnown RBP5.44□□□□□ -1.54
SCN2A-210ENST00000636135 TUBB4BP68371 445 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 PPLO60437 1756 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 ARHGAP5Q13017 1502 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 DDX10Q13206 875 aaKnown RBP5.44□□□□□ -1.54
SCN2A-210ENST00000636135 MYOM2P54296 1465 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 UGGT1Q9NYU2 1555 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 MAGI3Q5TCQ9 1506 aa5.44□□□□□ -1.54
SCN2A-210ENST00000636135 NPM1P06748 294 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCN2A-210ENST00000636135 SUPT16HQ9Y5B9 1047 aaKnown RBP5.43□□□□□ -1.54
SCN2A-210ENST00000636135 CGNL1Q0VF96 1302 aa5.43□□□□□ -1.54
SCN2A-210ENST00000636135 DHX29Q7Z478 1369 aaKnown RBP5.43□□□□□ -1.54
SCN2A-210ENST00000636135 SAMD1Q6SPF0 538 aaPredicted RBP5.43□□□□□ -1.54
SCN2A-210ENST00000636135 GPATCH3Q96I76 525 aa5.43□□□□□ -1.54
SCN2A-210ENST00000636135 DIAPH3Q9NSV4 1193 aa5.43□□□□□ -1.54
SCN2A-210ENST00000636135 ANKRD50Q9ULJ7 1429 aa5.43□□□□□ -1.54
SCN2A-210ENST00000636135 CDR1P51861 262 aa5.43□□□□□ -1.54
SCN2A-210ENST00000636135 ST18O60284 1047 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 HSP90AB1P08238 724 aaKnown RBP5.42□□□□□ -1.54
SCN2A-210ENST00000636135 VWDEQ8N2E2 1590 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 LETM1O95202 739 aaPredicted RBP5.42□□□□□ -1.54
SCN2A-210ENST00000636135 CENPQQ7L2Z9 268 aaPredicted RBP5.42□□□□□ -1.54
SCN2A-210ENST00000636135 FAM107BQ9H098 131 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 ABCC5O15440 1437 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 HMMRO75330 724 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 TXLNBQ8N3L3 684 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 HOOK1Q9UJC3 728 aaKnown RBP5.42□□□□□ -1.54
SCN2A-210ENST00000636135 GLI2P10070 1586 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 PLEKHD1A6NEE1 506 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 RIMS1Q86UR5 1692 aaKnown RBP5.42□□□□□ -1.54
SCN2A-210ENST00000636135 MCM2P49736 904 aa5.42□□□□□ -1.54
SCN2A-210ENST00000636135 ARGLU1Q9NWB6 273 aaPredicted RBP5.42□□□□□ -1.54
SCN2A-210ENST00000636135 RWDD1Q9H446 243 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 MAP2P11137 1827 aaKnown RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 PPRC1Q5VV67 1664 aaKnown RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 ZFYVE16Q7Z3T8 1539 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 ANKRD30BQ9BXX2 1392 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 DEKP35659 375 aaKnown RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 HIRIP3Q9BW71 556 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 MADDQ8WXG6 1647 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 CCDC88AQ3V6T2 1871 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 HMGB3O15347 200 aaKnown RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 IBSPP21815 317 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 LMOD3Q0VAK6 560 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 CHIC2Q9UKJ5 165 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 NEO1Q92859 1461 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 KIF2AO00139 706 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 POLR3GO15318 223 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 CAVIN2O95810 425 aa5.41□□□□□ -1.54
SCN2A-210ENST00000636135 CHMP7Q8WUX9 453 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 CT47B1P0C2W7 299 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-210ENST00000636135 ATP7AQ04656 1500 aa5.4□□□□□ -1.54
SCN2A-210ENST00000636135 VSIG10Q8N0Z9 540 aa5.4□□□□□ -1.54
SCN2A-210ENST00000636135 PLB1Q6P1J6 1458 aa5.4□□□□□ -1.54
SCN2A-210ENST00000636135 ZMYM3Q14202 1370 aa5.4□□□□□ -1.54
SCN2A-210ENST00000636135 HDGFP51858 240 aaKnown RBP5.4□□□□□ -1.54
SCN2A-210ENST00000636135 TRIP11Q15643 1979 aa5.4□□□□□ -1.54
SCN2A-210ENST00000636135 MYO6Q9UM54 1294 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 RBM19Q9Y4C8 960 aaKnown RBP5.4□□□□□ -1.55
SCN2A-210ENST00000636135 GPRASP1Q5JY77 1395 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 NPC1L1Q9UHC9 1359 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 FANCAO15360 1455 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 FGD1P98174 961 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 GSE1Q14687 1217 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 BRD4O60885 1362 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-210ENST00000636135 TPM1P09493 284 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 DCTN1Q14203 1278 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 FAM184AQ8NB25 1140 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 MROH2AA6NES4 1674 aa5.4□□□□□ -1.55
SCN2A-210ENST00000636135 NLRP13Q86W25 1043 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 TDRD9Q8NDG6 1382 aaKnown RBP5.39□□□□□ -1.55
SCN2A-210ENST00000636135 U2SURPO15042 1029 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms