RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 POGKQ9P215 609 aa13.67□□□□□ -0.22
CACNA1A-216ENST00000635742 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-216ENST00000635742 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
CACNA1A-216ENST00000635742 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
CACNA1A-216ENST00000635742 SLC26A8Q96RN1 970 aa13.64□□□□□ -0.23
CACNA1A-216ENST00000635742 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
CACNA1A-216ENST00000635742 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-216ENST00000635742 RALBP1Q15311 655 aa13.64□□□□□ -0.23
CACNA1A-216ENST00000635742 CC2D1BQ5T0F9 858 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-216ENST00000635742 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
CACNA1A-216ENST00000635742 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
CACNA1A-216ENST00000635742 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-216ENST00000635742 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-216ENST00000635742 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
CACNA1A-216ENST00000635742 MYBBP1AQ9BQG0 1328 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-216ENST00000635742 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-216ENST00000635742 TMC1Q8TDI8 760 aa13.62□□□□□ -0.23
CACNA1A-216ENST00000635742 SLC12A5Q9H2X9 1139 aa13.62□□□□□ -0.23
CACNA1A-216ENST00000635742 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
CACNA1A-216ENST00000635742 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-216ENST00000635742 CARD14Q9BXL6 1004 aa13.61□□□□□ -0.23
CACNA1A-216ENST00000635742 TBX22Q9Y458 520 aa13.61□□□□□ -0.23
CACNA1A-216ENST00000635742 USP32Q8NFA0 1604 aa13.61□□□□□ -0.23
CACNA1A-216ENST00000635742 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-216ENST00000635742 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
CACNA1A-216ENST00000635742 SIRT1Q96EB6 747 aa13.6□□□□□ -0.23
CACNA1A-216ENST00000635742 ADGRB2O60241 1585 aa13.6□□□□□ -0.23
CACNA1A-216ENST00000635742 ATAD2Q6PL18 1390 aa13.6□□□□□ -0.23
CACNA1A-216ENST00000635742 NPC1L1Q9UHC9 1359 aa13.59□□□□□ -0.23
CACNA1A-216ENST00000635742 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
CACNA1A-216ENST00000635742 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
CACNA1A-216ENST00000635742 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-216ENST00000635742 ANKRD36BQ8N2N9 1353 aa13.59□□□□□ -0.23
CACNA1A-216ENST00000635742 NINLQ9Y2I6 1382 aa13.59□□□□□ -0.23
CACNA1A-216ENST00000635742 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.23
CACNA1A-216ENST00000635742 CD163L1Q9NR16 1453 aa13.58□□□□□ -0.24
CACNA1A-216ENST00000635742 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
CACNA1A-216ENST00000635742 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
CACNA1A-216ENST00000635742 FAM9BQ8IZU0 186 aa13.56□□□□□ -0.24
CACNA1A-216ENST00000635742 AMOTL2Q9Y2J4 779 aa13.56□□□□□ -0.24
CACNA1A-216ENST00000635742 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
CACNA1A-216ENST00000635742 CHD2O14647 1828 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-216ENST00000635742 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
CACNA1A-216ENST00000635742 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-216ENST00000635742 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-216ENST00000635742 ATP7BP35670 1465 aa13.55□□□□□ -0.24
CACNA1A-216ENST00000635742 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
CACNA1A-216ENST00000635742 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
CACNA1A-216ENST00000635742 PPP2R1AP30153 589 aa13.52□□□□□ -0.24
CACNA1A-216ENST00000635742 PNISRQ8TF01 805 aaKnown RBP13.52□□□□□ -0.24
CACNA1A-216ENST00000635742 KCNA6P17658 529 aa13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 CABP1Q9NZU7 370 aa13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 NCKAP5LQ9HCH0 1330 aa13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 CDC42BPGQ6DT37 1551 aa13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
CACNA1A-216ENST00000635742 AKAP12Q02952 1782 aa13.51□□□□□ -0.25
CACNA1A-216ENST00000635742 ITSN1Q15811 1721 aa13.51□□□□□ -0.25
CACNA1A-216ENST00000635742 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
CACNA1A-216ENST00000635742 MON2Q7Z3U7 1717 aa13.51□□□□□ -0.25
CACNA1A-216ENST00000635742 NALCNQ8IZF0 1738 aa13.51□□□□□ -0.25
CACNA1A-216ENST00000635742 NWD1Q149M9 1564 aa13.5□□□□□ -0.25
CACNA1A-216ENST00000635742 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
CACNA1A-216ENST00000635742 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
CACNA1A-216ENST00000635742 NUDT16Q96DE0 195 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-216ENST00000635742 NSD2O96028 1365 aa13.49□□□□□ -0.25
CACNA1A-216ENST00000635742 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-216ENST00000635742 CPSF1Q10570 1443 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-216ENST00000635742 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-216ENST00000635742 FMN2Q9NZ56 1722 aa13.48□□□□□ -0.25
CACNA1A-216ENST00000635742 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-216ENST00000635742 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
CACNA1A-216ENST00000635742 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
CACNA1A-216ENST00000635742 MORC1Q86VD1 984 aa13.47□□□□□ -0.25
CACNA1A-216ENST00000635742 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
CACNA1A-216ENST00000635742 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
CACNA1A-216ENST00000635742 HSPA2P54652 639 aa13.45□□□□□ -0.26
CACNA1A-216ENST00000635742 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
CACNA1A-216ENST00000635742 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-216ENST00000635742 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
CACNA1A-216ENST00000635742 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-216ENST00000635742 FYB1O15117 783 aa13.43□□□□□ -0.26
CACNA1A-216ENST00000635742 SHPRHQ149N8 1683 aa13.43□□□□□ -0.26
CACNA1A-216ENST00000635742 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
CACNA1A-216ENST00000635742 ADGRL3Q9HAR2 1447 aa13.42□□□□□ -0.26
CACNA1A-216ENST00000635742 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
CACNA1A-216ENST00000635742 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-216ENST00000635742 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
CACNA1A-216ENST00000635742 STRCQ7RTU9 1775 aa13.42□□□□□ -0.26
CACNA1A-216ENST00000635742 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-216ENST00000635742 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
CACNA1A-216ENST00000635742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.41□□□□□ -0.26
CACNA1A-216ENST00000635742 INSRP06213 1382 aa13.4□□□□□ -0.26
CACNA1A-216ENST00000635742 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
CACNA1A-216ENST00000635742 ACEP12821 1306 aa13.4□□□□□ -0.26
CACNA1A-216ENST00000635742 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-216ENST00000635742 USP6P35125 1406 aa13.39□□□□□ -0.27
CACNA1A-216ENST00000635742 NME9Q86XW9 330 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms