RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 MARSP56192 900 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-243ENST00000635590 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
SMARCA2-243ENST00000635590 G3V3G9 751 aa11□□□□□ -0.65
SMARCA2-243ENST00000635590 ZC3H6P61129 1189 aaKnown RBP11□□□□□ -0.65
SMARCA2-243ENST00000635590 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
SMARCA2-243ENST00000635590 SSFA2P28290 1259 aa11□□□□□ -0.65
SMARCA2-243ENST00000635590 SEMA3FQ13275 785 aa11□□□□□ -0.65
SMARCA2-243ENST00000635590 NPAS4Q8IUM7 802 aa11□□□□□ -0.65
SMARCA2-243ENST00000635590 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
SMARCA2-243ENST00000635590 VAMP1P23763 118 aa10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 UBXN4Q92575 508 aa10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 POLR3GLQ9BT43 218 aa10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 RBM27Q9P2N5 1060 aaKnown RBP10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 NOVA2Q9UNW9 492 aaKnown RBP10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 PPP1R1BQ9UD71 204 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-243ENST00000635590 ANKRD33BA6NCL7 494 aa10.97□□□□□ -0.65
SMARCA2-243ENST00000635590 SERPINB4P48594 390 aa10.97□□□□□ -0.65
SMARCA2-243ENST00000635590 LRRN4Q8WUT4 740 aa10.97□□□□□ -0.65
SMARCA2-243ENST00000635590 SLAIN2Q9P270 581 aa10.97□□□□□ -0.65
SMARCA2-243ENST00000635590 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
SMARCA2-243ENST00000635590 EPS8L1Q8TE68 723 aa10.96□□□□□ -0.65
SMARCA2-243ENST00000635590 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
SMARCA2-243ENST00000635590 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
SMARCA2-243ENST00000635590 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
SMARCA2-243ENST00000635590 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
SMARCA2-243ENST00000635590 NAALADL2Q58DX5 795 aa10.95□□□□□ -0.66
SMARCA2-243ENST00000635590 CUX2O14529 1486 aa10.94□□□□□ -0.66
SMARCA2-243ENST00000635590 IRX5P78411 483 aaPredicted RBP10.93□□□□□ -0.66
SMARCA2-243ENST00000635590 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
SMARCA2-243ENST00000635590 BIN2Q9UBW5 565 aaPredicted RBP10.93□□□□□ -0.66
SMARCA2-243ENST00000635590 RECKO95980 971 aa10.92□□□□□ -0.66
SMARCA2-243ENST00000635590 SF3A1Q15459 793 aaKnown RBP10.91□□□□□ -0.66
SMARCA2-243ENST00000635590 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
SMARCA2-243ENST00000635590 ANKRD13AQ8IZ07 590 aa10.91□□□□□ -0.66
SMARCA2-243ENST00000635590 OCEL1Q9H607 264 aa10.91□□□□□ -0.66
SMARCA2-243ENST00000635590 C7P10643 843 aa10.9□□□□□ -0.66
SMARCA2-243ENST00000635590 TAGLNQ01995 201 aaKnown RBP10.9□□□□□ -0.66
SMARCA2-243ENST00000635590 DHX37Q8IY37 1157 aaKnown RBP10.9□□□□□ -0.66
SMARCA2-243ENST00000635590 HELBQ8NG08 1087 aaPredicted RBP10.9□□□□□ -0.66
SMARCA2-243ENST00000635590 PRSS12P56730 875 aa10.89□□□□□ -0.67
SMARCA2-243ENST00000635590 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
SMARCA2-243ENST00000635590 PIK3CDO00329 1044 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 TSC1Q92574 1164 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 KDM4AO75164 1064 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 SLC34A2O95436 690 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 FDX1P10109 184 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 EIF4G2P78344 907 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 EYA1Q99502 592 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
SMARCA2-243ENST00000635590 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
SMARCA2-243ENST00000635590 CDCA7LQ96GN5 454 aa10.87□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L3A6NCW0 530 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L4A6NCW7 530 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L2Q6R6M4 530 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L1Q7RTZ2 530 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 ANKRD62A6NC57 917 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 FAM196BA6NMK8 535 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 HOXA2O43364 376 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 SCNN1AP37088 669 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L15C9J2P7 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L10C9JJH3 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L13C9JLJ4 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L12C9JPN9 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L11C9JVI0 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L21D6R901 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L18D6R9N7 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L22D6RA61 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L17D6RBQ6 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L19D6RCP7 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L20D6RJB6 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 USP17L24Q0WX57 530 aa10.85□□□□□ -0.67
SMARCA2-243ENST00000635590 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
SMARCA2-243ENST00000635590 ATP2B4P23634 1241 aa10.84□□□□□ -0.67
SMARCA2-243ENST00000635590 ERCC6Q03468 1493 aa10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 GUCA2AQ02747 115 aa10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 MTMR2Q13614 643 aa10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 NR6A1Q15406 480 aa10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 TSNAXIP1Q2TAA8 658 aa10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 NFATC2IPQ8NCF5 419 aa10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 PNMA1Q8ND90 353 aa10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.68
SMARCA2-243ENST00000635590 CFAP99D6REC4 459 aa10.82□□□□□ -0.68
SMARCA2-243ENST00000635590 USP17L5A8MUK1 530 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 FOSBP53539 338 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 USP46P62068 366 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 PLEKHM2Q8IWE5 1019 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 SLF2Q8IX21 1173 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 ERCC5P28715 1186 aaPredicted RBP10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 PTK7Q13308 1070 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 RDH13Q8NBN7 331 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 FAM200AQ8TCP9 573 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 HLA-CQ95604 372 aa10.81□□□□□ -0.68
SMARCA2-243ENST00000635590 ZC3H4Q9UPT8 1303 aaKnown RBP10.8□□□□□ -0.68
SMARCA2-243ENST00000635590 DNAJB2P25686 324 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms