RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CPLX2Q6PUV4 134 aaKnown RBP14.09□□□□□ -0.15
COL11A1-211ENST00000635193 MSH5O43196 834 aa14.09□□□□□ -0.15
COL11A1-211ENST00000635193 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
COL11A1-211ENST00000635193 FKBP5Q13451 457 aaPredicted RBP14.08□□□□□ -0.15
COL11A1-211ENST00000635193 TSPY26PQ9H489 355 aa14.08□□□□□ -0.15
COL11A1-211ENST00000635193 PPP2R1AP30153 589 aa14.08□□□□□ -0.16
COL11A1-211ENST00000635193 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
COL11A1-211ENST00000635193 EIF2S2P20042 333 aaKnown RBP14.08□□□□□ -0.16
COL11A1-211ENST00000635193 AKAP17AQ02040 695 aaKnown RBP14.08□□□□□ -0.16
COL11A1-211ENST00000635193 PRPF40AO75400 957 aaKnown RBP14.08□□□□□ -0.16
COL11A1-211ENST00000635193 TAF3Q5VWG9 929 aa14.08□□□□□ -0.16
COL11A1-211ENST00000635193 LEKR1Q6ZMV7 388 aa14.08□□□□□ -0.16
COL11A1-211ENST00000635193 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL11A1-211ENST00000635193 CCDC73Q6ZRK6 1079 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 TRIM29Q14134 588 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 CPLX1O14810 134 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 CDR1P51861 262 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 SYNE3Q6ZMZ3 975 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
COL11A1-211ENST00000635193 LETM1O95202 739 aaPredicted RBP14.07□□□□□ -0.16
COL11A1-211ENST00000635193 LRRFIP1Q32MZ4 808 aaKnown RBP14.07□□□□□ -0.16
COL11A1-211ENST00000635193 FBXW7Q969H0 707 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 TEFQ10587 303 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 RABEP1Q15276 862 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 NEXNQ0ZGT2 675 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.06□□□□□ -0.16
COL11A1-211ENST00000635193 CCDC184Q52MB2 194 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
COL11A1-211ENST00000635193 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 FYCO1Q9BQS8 1478 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 ANKRD20A12PQ8NF67 263 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 ERCC4Q92889 916 aaPredicted RBP14.06□□□□□ -0.16
COL11A1-211ENST00000635193 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
COL11A1-211ENST00000635193 BCAR3O75815 825 aa14.05□□□□□ -0.16
COL11A1-211ENST00000635193 HOOK1Q9UJC3 728 aaKnown RBP14.05□□□□□ -0.16
COL11A1-211ENST00000635193 ANKRD50Q9ULJ7 1429 aa14.05□□□□□ -0.16
COL11A1-211ENST00000635193 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
COL11A1-211ENST00000635193 TRIM5Q9C035 493 aa14.05□□□□□ -0.16
COL11A1-211ENST00000635193 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
COL11A1-211ENST00000635193 ERC2O15083 957 aa14.05□□□□□ -0.16
COL11A1-211ENST00000635193 MARCH6O60337 910 aa14.05□□□□□ -0.16
COL11A1-211ENST00000635193 HSP90AB4PQ58FF6 505 aa14.04□□□□□ -0.16
COL11A1-211ENST00000635193 HMOX1P09601 288 aa14.04□□□□□ -0.16
COL11A1-211ENST00000635193 G3BP1Q13283 466 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL11A1-211ENST00000635193 ARAP1Q96P48 1450 aa14.04□□□□□ -0.16
COL11A1-211ENST00000635193 NEK4P51957 841 aa14.03□□□□□ -0.16
COL11A1-211ENST00000635193 CCDC191Q8NCU4 936 aa14.03□□□□□ -0.16
COL11A1-211ENST00000635193 MCM2P49736 904 aa14.03□□□□□ -0.16
COL11A1-211ENST00000635193 MTHFSP49914 203 aa14.03□□□□□ -0.16
COL11A1-211ENST00000635193 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
COL11A1-211ENST00000635193 NAT10Q9H0A0 1025 aaKnown RBP14.02□□□□□ -0.16
COL11A1-211ENST00000635193 NBPF8Q3BBV2 869 aa14.02□□□□□ -0.16
COL11A1-211ENST00000635193 GCC1Q96CN9 775 aa14.02□□□□□ -0.16
COL11A1-211ENST00000635193 PCMTD1Q96MG8 357 aaPredicted RBP14.02□□□□□ -0.16
COL11A1-211ENST00000635193 TSPYL4Q9UJ04 414 aa14.02□□□□□ -0.16
COL11A1-211ENST00000635193 NINLQ9Y2I6 1382 aa14.02□□□□□ -0.17
COL11A1-211ENST00000635193 FOSBP53539 338 aa14.02□□□□□ -0.17
COL11A1-211ENST00000635193 GGNBP2Q9H3C7 697 aa14.02□□□□□ -0.17
COL11A1-211ENST00000635193 MCM4P33991 863 aa14.02□□□□□ -0.17
COL11A1-211ENST00000635193 EXOSC9Q06265 439 aaKnown RBP14.02□□□□□ -0.17
COL11A1-211ENST00000635193 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
COL11A1-211ENST00000635193 CCDC112Q8NEF3 446 aa14.02□□□□□ -0.17
COL11A1-211ENST00000635193 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
COL11A1-211ENST00000635193 ZSCAN30Q86W11 494 aa14.01□□□□□ -0.17
COL11A1-211ENST00000635193 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
COL11A1-211ENST00000635193 DCTN1Q14203 1278 aa14□□□□□ -0.17
COL11A1-211ENST00000635193 ZMYND15Q9H091 742 aa14□□□□□ -0.17
COL11A1-211ENST00000635193 PDCL3Q9H2J4 239 aa14□□□□□ -0.17
COL11A1-211ENST00000635193 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
COL11A1-211ENST00000635193 TRDNQ13061 729 aa14□□□□□ -0.17
COL11A1-211ENST00000635193 PTPRGP23470 1445 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 ERICH3Q5RHP9 1530 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 CCP110O43303 1012 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 DDX58O95786 925 aaKnown RBP13.99□□□□□ -0.17
COL11A1-211ENST00000635193 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
COL11A1-211ENST00000635193 PSMA5P28066 241 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 TSPYL1Q9H0U9 437 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 CNTROBQ8N137 903 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 PDCL2Q8N4E4 241 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 SDF4Q9BRK5 362 aa13.99□□□□□ -0.17
COL11A1-211ENST00000635193 NOB1Q9ULX3 412 aaKnown RBP13.99□□□□□ -0.17
COL11A1-211ENST00000635193 C1orf115Q9H7X2 142 aa13.98□□□□□ -0.17
COL11A1-211ENST00000635193 PRDM10Q9NQV6 1147 aa13.98□□□□□ -0.17
COL11A1-211ENST00000635193 UBTFL1P0CB47 393 aaPredicted RBP13.98□□□□□ -0.17
COL11A1-211ENST00000635193 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
COL11A1-211ENST00000635193 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
COL11A1-211ENST00000635193 CCDC47Q96A33 483 aaKnown RBP13.98□□□□□ -0.17
COL11A1-211ENST00000635193 CIZ1Q9ULV3 898 aaPredicted RBP13.97□□□□□ -0.17
COL11A1-211ENST00000635193 FIBPO43427 364 aa13.97□□□□□ -0.17
COL11A1-211ENST00000635193 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
COL11A1-211ENST00000635193 ERICH4A6NGS2 130 aa13.97□□□□□ -0.17
COL11A1-211ENST00000635193 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
COL11A1-211ENST00000635193 NFXL1Q6ZNB6 911 aa13.97□□□□□ -0.17
COL11A1-211ENST00000635193 TTC5Q8N0Z6 440 aa13.97□□□□□ -0.17
COL11A1-211ENST00000635193 PDILTQ8N807 584 aa13.97□□□□□ -0.17
COL11A1-211ENST00000635193 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms