RNA–Protein interactions for RNA: ENST00000630240.1

CHRNA4-213, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 1,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-213ENST00000630240 ARHGEF28Q8N1W1 1705 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-213ENST00000630240 USP47Q96K76 1375 aa21.08■□□□□ 0.96
CHRNA4-213ENST00000630240 CCDC7Q96M83 1385 aa21.08■□□□□ 0.96
CHRNA4-213ENST00000630240 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
CHRNA4-213ENST00000630240 WASHC2AQ641Q2 1341 aa21.07■□□□□ 0.96
CHRNA4-213ENST00000630240 ROBO2Q9HCK4 1378 aa21.07■□□□□ 0.96
CHRNA4-213ENST00000630240 CCER2I3L3R5 266 aa21.06■□□□□ 0.96
CHRNA4-213ENST00000630240 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
CHRNA4-213ENST00000630240 TRAK1Q9UPV9 953 aa21.04■□□□□ 0.96
CHRNA4-213ENST00000630240 MSH6P52701 1360 aa21.04■□□□□ 0.96
CHRNA4-213ENST00000630240 EIF3AQ14152 1382 aaKnown RBP21.04■□□□□ 0.96
CHRNA4-213ENST00000630240 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
CHRNA4-213ENST00000630240 NALCNQ8IZF0 1738 aa21.02■□□□□ 0.96
CHRNA4-213ENST00000630240 POGKQ9P215 609 aa21.02■□□□□ 0.96
CHRNA4-213ENST00000630240 ADGRL3Q9HAR2 1447 aa21.02■□□□□ 0.96
CHRNA4-213ENST00000630240 PRAM1Q96QH2 718 aa21■□□□□ 0.95
CHRNA4-213ENST00000630240 DCCP43146 1447 aa21■□□□□ 0.95
CHRNA4-213ENST00000630240 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.99■□□□□ 0.95
CHRNA4-213ENST00000630240 C19orf44Q9H6X5 657 aa20.99■□□□□ 0.95
CHRNA4-213ENST00000630240 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
CHRNA4-213ENST00000630240 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
CHRNA4-213ENST00000630240 QRICH2Q9H0J4 1663 aa20.97■□□□□ 0.95
CHRNA4-213ENST00000630240 PLEKHH1Q9ULM0 1364 aa20.97■□□□□ 0.95
CHRNA4-213ENST00000630240 CDC42BPGQ6DT37 1551 aa20.97■□□□□ 0.95
CHRNA4-213ENST00000630240 UBAP1LF5GYI3 381 aa20.96■□□□□ 0.95
CHRNA4-213ENST00000630240 ADGRB2O60241 1585 aa20.96■□□□□ 0.95
CHRNA4-213ENST00000630240 KIF7Q2M1P5 1343 aa20.96■□□□□ 0.95
CHRNA4-213ENST00000630240 CENPJQ9HC77 1338 aaPredicted RBP20.96■□□□□ 0.95
CHRNA4-213ENST00000630240 ATF3P18847 181 aa20.95■□□□□ 0.94
CHRNA4-213ENST00000630240 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
CHRNA4-213ENST00000630240 TOM1O60784 492 aa20.94■□□□□ 0.94
CHRNA4-213ENST00000630240 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
CHRNA4-213ENST00000630240 C11orf95C9JLR9 678 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-213ENST00000630240 FMN2Q9NZ56 1722 aa20.9■□□□□ 0.94
CHRNA4-213ENST00000630240 MINK1Q8N4C8 1332 aaPredicted RBP20.89■□□□□ 0.93
CHRNA4-213ENST00000630240 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
CHRNA4-213ENST00000630240 SBNO2Q9Y2G9 1366 aa20.88■□□□□ 0.93
CHRNA4-213ENST00000630240 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
CHRNA4-213ENST00000630240 MST1RQ04912 1400 aa20.85■□□□□ 0.93
CHRNA4-213ENST00000630240 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
CHRNA4-213ENST00000630240 TULP4Q9NRJ4 1543 aa20.83■□□□□ 0.93
CHRNA4-213ENST00000630240 WASLO00401 505 aaPredicted RBP20.83■□□□□ 0.93
CHRNA4-213ENST00000630240 EVC2Q86UK5 1308 aa20.83■□□□□ 0.93
CHRNA4-213ENST00000630240 ANKARQ7Z5J8 1434 aa20.83■□□□□ 0.92
CHRNA4-213ENST00000630240 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
CHRNA4-213ENST00000630240 ST20-MTHFSA0A0A6YYL1 179 aa20.82■□□□□ 0.92
CHRNA4-213ENST00000630240 HSPA1LP34931 641 aa20.81■□□□□ 0.92
CHRNA4-213ENST00000630240 C1orf167Q5SNV9 1468 aa20.81■□□□□ 0.92
CHRNA4-213ENST00000630240 ROBO1Q9Y6N7 1651 aa20.8■□□□□ 0.92
CHRNA4-213ENST00000630240 PIP4K2BP78356 416 aa20.78■□□□□ 0.92
CHRNA4-213ENST00000630240 CDK19Q9BWU1 502 aa20.78■□□□□ 0.92
CHRNA4-213ENST00000630240 KIF1AQ12756 1690 aa20.78■□□□□ 0.92
CHRNA4-213ENST00000630240 USP32Q8NFA0 1604 aa20.78■□□□□ 0.92
CHRNA4-213ENST00000630240 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
CHRNA4-213ENST00000630240 RGPD8O14715 1765 aaPredicted RBP20.77■□□□□ 0.92
CHRNA4-213ENST00000630240 SRPK2P78362 688 aaKnown RBP20.77■□□□□ 0.92
CHRNA4-213ENST00000630240 GTF3C3Q9Y5Q9 886 aa20.77■□□□□ 0.92
CHRNA4-213ENST00000630240 TESK2Q96S53 571 aa20.76■□□□□ 0.91
CHRNA4-213ENST00000630240 ATP7BP35670 1465 aa20.75■□□□□ 0.91
CHRNA4-213ENST00000630240 TMF1P82094 1093 aa20.75■□□□□ 0.91
CHRNA4-213ENST00000630240 TOPAZ1Q8N9V7 1692 aa20.75■□□□□ 0.91
CHRNA4-213ENST00000630240 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
CHRNA4-213ENST00000630240 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
CHRNA4-213ENST00000630240 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
CHRNA4-213ENST00000630240 POLR3GLQ9BT43 218 aa20.74■□□□□ 0.91
CHRNA4-213ENST00000630240 ATAD2Q6PL18 1390 aa20.74■□□□□ 0.91
CHRNA4-213ENST00000630240 BRINP3Q76B58 766 aa20.73■□□□□ 0.91
CHRNA4-213ENST00000630240 NUDT16Q96DE0 195 aaKnown RBP20.73■□□□□ 0.91
CHRNA4-213ENST00000630240 PUS7Q96PZ0 661 aaKnown RBP20.73■□□□□ 0.91
CHRNA4-213ENST00000630240 KTN1Q86UP2 1357 aaKnown RBP20.73■□□□□ 0.91
CHRNA4-213ENST00000630240 NHSL1Q5SYE7 1610 aa20.72■□□□□ 0.91
CHRNA4-213ENST00000630240 AHDC1Q5TGY3 1603 aaPredicted RBP20.71■□□□□ 0.91
CHRNA4-213ENST00000630240 CABP2Q9NPB3 220 aa20.71■□□□□ 0.91
CHRNA4-213ENST00000630240 CCDC61Q9Y6R9 512 aa20.71■□□□□ 0.91
CHRNA4-213ENST00000630240 PRR36Q9H6K5 1346 aa20.7■□□□□ 0.9
CHRNA4-213ENST00000630240 ORAI2Q96SN7 254 aa20.7■□□□□ 0.9
CHRNA4-213ENST00000630240 PHF8Q9UPP1 1060 aa20.69■□□□□ 0.9
CHRNA4-213ENST00000630240 PHLPP1O60346 1717 aa20.69■□□□□ 0.9
CHRNA4-213ENST00000630240 MED1Q15648 1581 aaPredicted RBP20.68■□□□□ 0.9
CHRNA4-213ENST00000630240 NPHP3Q7Z494 1330 aa20.68■□□□□ 0.9
CHRNA4-213ENST00000630240 PPIP5K1Q6PFW1 1433 aa20.67■□□□□ 0.9
CHRNA4-213ENST00000630240 NINLQ9Y2I6 1382 aa20.66■□□□□ 0.9
CHRNA4-213ENST00000630240 PLEKHG3A1L390 1219 aa20.64■□□□□ 0.89
CHRNA4-213ENST00000630240 NGDNQ8NEJ9 315 aaKnown RBP20.64■□□□□ 0.89
CHRNA4-213ENST00000630240 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
CHRNA4-213ENST00000630240 COL16A1Q07092 1604 aaPredicted RBP20.62■□□□□ 0.89
CHRNA4-213ENST00000630240 FOXO3O43524 673 aa20.62■□□□□ 0.89
CHRNA4-213ENST00000630240 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
CHRNA4-213ENST00000630240 POLR3AO14802 1390 aaPredicted RBP20.62■□□□□ 0.89
CHRNA4-213ENST00000630240 AKAP12Q02952 1782 aa20.61■□□□□ 0.89
CHRNA4-213ENST00000630240 PSME1Q06323 249 aa20.6■□□□□ 0.89
CHRNA4-213ENST00000630240 CABP1Q9NZU7 370 aa20.6■□□□□ 0.89
CHRNA4-213ENST00000630240 PXDNQ92626 1479 aa20.6■□□□□ 0.89
CHRNA4-213ENST00000630240 RALBP1Q15311 655 aa20.6■□□□□ 0.89
CHRNA4-213ENST00000630240 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
CHRNA4-213ENST00000630240 ACEP12821 1306 aa20.59■□□□□ 0.89
CHRNA4-213ENST00000630240 SOS2Q07890 1332 aaPredicted RBP20.59■□□□□ 0.89
CHRNA4-213ENST00000630240 BRD4O60885 1362 aaPredicted RBP20.58■□□□□ 0.88
CHRNA4-213ENST00000630240 MYOM1P52179 1685 aa20.58■□□□□ 0.88
CHRNA4-213ENST00000630240 KRT28Q7Z3Y7 464 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms