RNA–Protein interactions for RNA: ENST00000629717.1

NRXN1-231, Transcript of neurexin 1, human

TSL 2

Gene NRXN1, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-231	ENST00000629717	ZFYVE9	O95405	1425 aa		13.22	□□□□□ -0.29
NRXN1-231	ENST00000629717	ASTL	Q6HA08	431 aa	Predicted RBP	13.22	□□□□□ -0.29
NRXN1-231	ENST00000629717	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
NRXN1-231	ENST00000629717	TRIM52	Q96A61	297 aa		13.22	□□□□□ -0.29
NRXN1-231	ENST00000629717	SLC26A8	Q96RN1	970 aa		13.22	□□□□□ -0.29
NRXN1-231	ENST00000629717	RIMS2	Q9UQ26	1411 aa		13.22	□□□□□ -0.29
NRXN1-231	ENST00000629717	TMEM131L	A2VDJ0	1609 aa		13.21	□□□□□ -0.29
NRXN1-231	ENST00000629717	TOM1	O60784	492 aa		13.21	□□□□□ -0.29
NRXN1-231	ENST00000629717	PPP1R15A	O75807	674 aa	Predicted RBP	13.21	□□□□□ -0.29
NRXN1-231	ENST00000629717	TRPC6	Q9Y210	931 aa		13.21	□□□□□ -0.29
NRXN1-231	ENST00000629717	PYGB	P11216	843 aa		13.2	□□□□□ -0.3
NRXN1-231	ENST00000629717	PLEKHG1	Q9ULL1	1385 aa		13.2	□□□□□ -0.3
NRXN1-231	ENST00000629717	LRRC7	Q96NW7	1537 aa		13.19	□□□□□ -0.3
NRXN1-231	ENST00000629717	ATMIN	O43313	823 aa	Predicted RBP	13.19	□□□□□ -0.3
NRXN1-231	ENST00000629717	KCNA6	P17658	529 aa		13.19	□□□□□ -0.3
NRXN1-231	ENST00000629717	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.18	□□□□□ -0.3
NRXN1-231	ENST00000629717	IFNL1	Q8IU54	200 aa		13.18	□□□□□ -0.3
NRXN1-231	ENST00000629717	PELP1	Q8IZL8	1130 aa	Known RBP	13.17	□□□□□ -0.3
NRXN1-231	ENST00000629717	TBX22	Q9Y458	520 aa		13.17	□□□□□ -0.3
NRXN1-231	ENST00000629717	TIE1	P35590	1138 aa		13.16	□□□□□ -0.3
NRXN1-231	ENST00000629717	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.16	□□□□□ -0.3
NRXN1-231	ENST00000629717	STRCP1	A6NGW2	1772 aa		13.16	□□□□□ -0.3
NRXN1-231	ENST00000629717	ACIN1	Q9UKV3	1341 aa	Known RBP	13.15	□□□□□ -0.3
NRXN1-231	ENST00000629717	PIP4K2B	P78356	416 aa		13.15	□□□□□ -0.3
NRXN1-231	ENST00000629717	ZNF326	Q5BKZ1	582 aa	Known RBP	13.15	□□□□□ -0.3
NRXN1-231	ENST00000629717	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.15	□□□□□ -0.3
NRXN1-231	ENST00000629717	TRPM2	O94759	1503 aa		13.14	□□□□□ -0.31
NRXN1-231	ENST00000629717	SPHKAP	Q2M3C7	1700 aa		13.14	□□□□□ -0.31
NRXN1-231	ENST00000629717	PROSER2	Q86WR7	435 aa	Predicted RBP	13.14	□□□□□ -0.31
NRXN1-231	ENST00000629717	TMEM94	Q12767	1356 aa		13.13	□□□□□ -0.31
NRXN1-231	ENST00000629717	CHRM1	P11229	460 aa	Predicted RBP	13.13	□□□□□ -0.31
NRXN1-231	ENST00000629717	CFAP44	Q96MT7	982 aa		13.13	□□□□□ -0.31
NRXN1-231	ENST00000629717	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.13	□□□□□ -0.31
NRXN1-231	ENST00000629717	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.13	□□□□□ -0.31
NRXN1-231	ENST00000629717	MYO5B	Q9ULV0	1848 aa		13.13	□□□□□ -0.31
NRXN1-231	ENST00000629717	ATN1	P54259	1190 aa	Predicted RBP	13.12	□□□□□ -0.31
NRXN1-231	ENST00000629717	MPHOSPH9	Q99550	1183 aa		13.12	□□□□□ -0.31
NRXN1-231	ENST00000629717	ADAMTS13	Q76LX8	1427 aa		13.12	□□□□□ -0.31
NRXN1-231	ENST00000629717	SETD5	Q9C0A6	1442 aa		13.12	□□□□□ -0.31
NRXN1-231	ENST00000629717	NKTR	P30414	1462 aa	Known RBP	13.11	□□□□□ -0.31
NRXN1-231	ENST00000629717	PIK3R4	Q99570	1358 aa		13.11	□□□□□ -0.31
NRXN1-231	ENST00000629717	ECM2	O94769	699 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-231	ENST00000629717	LHX8	Q68G74	356 aa		13.11	□□□□□ -0.31
NRXN1-231	ENST00000629717	CLTCL1	P53675	1640 aa		13.1	□□□□□ -0.31
NRXN1-231	ENST00000629717	ALK	Q9UM73	1620 aa		13.1	□□□□□ -0.31
NRXN1-231	ENST00000629717	HSPA1L	P34931	641 aa		13.1	□□□□□ -0.31
NRXN1-231	ENST00000629717	TSHZ2	Q9NRE2	1034 aa		13.1	□□□□□ -0.31
NRXN1-231	ENST00000629717	TTLL13P	A6NNM8	815 aa		13.09	□□□□□ -0.31
NRXN1-231	ENST00000629717	NWD1	Q149M9	1564 aa		13.09	□□□□□ -0.31
NRXN1-231	ENST00000629717	RBM33	Q96EV2	1170 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-231	ENST00000629717	DIP2A	Q14689	1571 aa		13.08	□□□□□ -0.32
NRXN1-231	ENST00000629717	PCDHB8	Q9UN66	801 aa		13.08	□□□□□ -0.32
NRXN1-231	ENST00000629717	RPGRIP1L	Q68CZ1	1315 aa		13.08	□□□□□ -0.32
NRXN1-231	ENST00000629717	RGL2	O15211	777 aa		13.07	□□□□□ -0.32
NRXN1-231	ENST00000629717	VGF	O15240	615 aa	Predicted RBP	13.07	□□□□□ -0.32
NRXN1-231	ENST00000629717	RAB3GAP2	Q9H2M9	1393 aa		13.07	□□□□□ -0.32
NRXN1-231	ENST00000629717	SLC39A7	Q92504	469 aa		13.06	□□□□□ -0.32
NRXN1-231	ENST00000629717	AMOTL2	Q9Y2J4	779 aa		13.06	□□□□□ -0.32
NRXN1-231	ENST00000629717	NEXMIF	Q5QGS0	1516 aa		13.06	□□□□□ -0.32
NRXN1-231	ENST00000629717	SETBP1	Q9Y6X0	1596 aa		13.06	□□□□□ -0.32
NRXN1-231	ENST00000629717	MSH6	P52701	1360 aa		13.06	□□□□□ -0.32
NRXN1-231	ENST00000629717	CCDC144A	A2RUR9	1427 aa		13.05	□□□□□ -0.32
NRXN1-231	ENST00000629717	NCOA3	Q9Y6Q9	1424 aa		13.05	□□□□□ -0.32
NRXN1-231	ENST00000629717	CHD2	O14647	1828 aa	Known RBP	13.04	□□□□□ -0.32
NRXN1-231	ENST00000629717	XIRP1	Q702N8	1843 aa	Known RBP	13.04	□□□□□ -0.32
NRXN1-231	ENST00000629717	C7	P10643	843 aa		13.04	□□□□□ -0.32
NRXN1-231	ENST00000629717	METRN	Q9UJH8	293 aa		13.04	□□□□□ -0.32
NRXN1-231	ENST00000629717	FAM135B	Q49AJ0	1406 aa		13.04	□□□□□ -0.32
NRXN1-231	ENST00000629717	PTPRU	Q92729	1446 aa		13.04	□□□□□ -0.32
NRXN1-231	ENST00000629717	HRC	P23327	699 aa		13.03	□□□□□ -0.32
NRXN1-231	ENST00000629717	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.03	□□□□□ -0.32
NRXN1-231	ENST00000629717	SLAIN2	Q9P270	581 aa		13.03	□□□□□ -0.32
NRXN1-231	ENST00000629717	KIF1B	O60333	1816 aa		13.03	□□□□□ -0.32
NRXN1-231	ENST00000629717	MET	P08581	1390 aa		13.03	□□□□□ -0.32
NRXN1-231	ENST00000629717	DISP3	Q9P2K9	1392 aa		13.03	□□□□□ -0.32
NRXN1-231	ENST00000629717	NRXN3	Q9Y4C0	1643 aa		13.02	□□□□□ -0.32
NRXN1-231	ENST00000629717	C14orf37	Q86TY3	774 aa		13.02	□□□□□ -0.33
NRXN1-231	ENST00000629717	TMEM106C	Q9BVX2	250 aa		13.02	□□□□□ -0.33
NRXN1-231	ENST00000629717	C19orf44	Q9H6X5	657 aa		13.02	□□□□□ -0.33
NRXN1-231	ENST00000629717	RGL3	Q3MIN7	710 aa		13.01	□□□□□ -0.33
NRXN1-231	ENST00000629717	SPATA31E1	Q6ZUB1	1445 aa		13.01	□□□□□ -0.33
NRXN1-231	ENST00000629717	CADPS2	Q86UW7	1296 aa		13	□□□□□ -0.33
NRXN1-231	ENST00000629717	ANKRD30B	Q9BXX2	1392 aa		12.99	□□□□□ -0.33
NRXN1-231	ENST00000629717	ATF3	P18847	181 aa		12.99	□□□□□ -0.33
NRXN1-231	ENST00000629717	TRIM35	Q9UPQ4	493 aa		12.99	□□□□□ -0.33
NRXN1-231	ENST00000629717	SPRYD3	Q8NCJ5	442 aa		12.98	□□□□□ -0.33
NRXN1-231	ENST00000629717	ADGRF5	Q8IZF2	1346 aa		12.97	□□□□□ -0.33
NRXN1-231	ENST00000629717	POTEB2	H3BUK9	544 aa		12.97	□□□□□ -0.33
NRXN1-231	ENST00000629717	XRN1	Q8IZH2	1706 aa	Known RBP	12.96	□□□□□ -0.33
NRXN1-231	ENST00000629717	DCC	P43146	1447 aa		12.95	□□□□□ -0.34
NRXN1-231	ENST00000629717	ROBO1	Q9Y6N7	1651 aa		12.94	□□□□□ -0.34
NRXN1-231	ENST00000629717	PTCH1	Q13635	1447 aa		12.94	□□□□□ -0.34
NRXN1-231	ENST00000629717	PPL	O60437	1756 aa		12.94	□□□□□ -0.34
NRXN1-231	ENST00000629717	POTEF	A5A3E0	1075 aa		12.93	□□□□□ -0.34
NRXN1-231	ENST00000629717	IER5L	Q5T953	404 aa		12.93	□□□□□ -0.34
NRXN1-231	ENST00000629717	PRAG1	Q86YV5	1406 aa		12.93	□□□□□ -0.34
NRXN1-231	ENST00000629717	ROBO2	Q9HCK4	1378 aa		12.93	□□□□□ -0.34
NRXN1-231	ENST00000629717	ILDR2	Q71H61	639 aa		12.92	□□□□□ -0.34
NRXN1-231	ENST00000629717	ADGRL3	Q9HAR2	1447 aa		12.92	□□□□□ -0.34
NRXN1-231	ENST00000629717	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms