RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ZNF592Q92610 1267 aa15.54■□□□□ 0.08
SCN8A-209ENST00000627620 MTHFSP49914 203 aa15.54■□□□□ 0.08
SCN8A-209ENST00000627620 C22orf23Q9BZE7 217 aa15.54■□□□□ 0.08
SCN8A-209ENST00000627620 ADAMTS8Q9UP79 889 aa15.54■□□□□ 0.08
SCN8A-209ENST00000627620 IPO7O95373 1038 aaKnown RBP15.53■□□□□ 0.08
SCN8A-209ENST00000627620 AAMPQ13685 434 aa15.53■□□□□ 0.08
SCN8A-209ENST00000627620 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
SCN8A-209ENST00000627620 FOSBP53539 338 aa15.53■□□□□ 0.08
SCN8A-209ENST00000627620 NUCB2P80303 420 aa15.53■□□□□ 0.08
SCN8A-209ENST00000627620 WASHC4Q2M389 1173 aa15.53■□□□□ 0.08
SCN8A-209ENST00000627620 CCDC70Q6NSX1 233 aa15.53■□□□□ 0.08
SCN8A-209ENST00000627620 RBM33Q96EV2 1170 aaKnown RBP15.53■□□□□ 0.08
SCN8A-209ENST00000627620 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.08
SCN8A-209ENST00000627620 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.07
SCN8A-209ENST00000627620 RALYLQ86SE5 291 aaKnown RBP15.52■□□□□ 0.07
SCN8A-209ENST00000627620 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.07
SCN8A-209ENST00000627620 SAFBQ15424 915 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCN8A-209ENST00000627620 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
SCN8A-209ENST00000627620 CDC45O75419 566 aa15.51■□□□□ 0.07
SCN8A-209ENST00000627620 AFAP1Q8N556 730 aa15.51■□□□□ 0.07
SCN8A-209ENST00000627620 TCP11L2Q8N4U5 519 aa15.5■□□□□ 0.07
SCN8A-209ENST00000627620 NCOA2Q15596 1464 aa15.5■□□□□ 0.07
SCN8A-209ENST00000627620 BRD4O60885 1362 aaPredicted RBP15.5■□□□□ 0.07
SCN8A-209ENST00000627620 SASS6Q6UVJ0 657 aa15.5■□□□□ 0.07
SCN8A-209ENST00000627620 FYCO1Q9BQS8 1478 aa15.49■□□□□ 0.07
SCN8A-209ENST00000627620 HSP90AA2PQ14568 343 aaPredicted RBP15.49■□□□□ 0.07
SCN8A-209ENST00000627620 CCDC73Q6ZRK6 1079 aa15.49■□□□□ 0.07
SCN8A-209ENST00000627620 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
SCN8A-209ENST00000627620 KIF21BO75037 1637 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 ARHGAP5Q13017 1502 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 FYB1O15117 783 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 ABTB2Q8N961 1025 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 CCDC30Q5VVM6 783 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 WASHC2AQ641Q2 1341 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 GPS2Q13227 327 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 HOMER1Q86YM7 354 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 GAS2L2Q8NHY3 880 aa15.48■□□□□ 0.07
SCN8A-209ENST00000627620 RRBP1Q9P2E9 1410 aaKnown RBP15.48■□□□□ 0.07
SCN8A-209ENST00000627620 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 GPRASP1Q5JY77 1395 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 NINLQ9Y2I6 1382 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 RSPH6AQ9H0K4 717 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 GNAI3P08754 354 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 PPP2R1AP30153 589 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 CNTROBQ8N137 903 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 CCDC43Q96MW1 224 aaKnown RBP15.47■□□□□ 0.07
SCN8A-209ENST00000627620 FSD1Q9BTV5 496 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 PRKAR2BP31323 418 aa15.47■□□□□ 0.07
SCN8A-209ENST00000627620 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
SCN8A-209ENST00000627620 CLASRPQ8N2M8 674 aaKnown RBP15.46■□□□□ 0.07
SCN8A-209ENST00000627620 SURF6O75683 361 aaKnown RBP15.46■□□□□ 0.07
SCN8A-209ENST00000627620 ESCO1Q5FWF5 840 aa15.46■□□□□ 0.06
SCN8A-209ENST00000627620 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
SCN8A-209ENST00000627620 PSMA5P28066 241 aa15.45■□□□□ 0.06
SCN8A-209ENST00000627620 TXNDC2Q86VQ3 553 aa15.45■□□□□ 0.06
SCN8A-209ENST00000627620 EXOSC9Q06265 439 aaKnown RBP15.44■□□□□ 0.06
SCN8A-209ENST00000627620 PLEKHO1Q53GL0 409 aaPredicted RBP15.44■□□□□ 0.06
SCN8A-209ENST00000627620 PRAM1Q96QH2 718 aa15.44■□□□□ 0.06
SCN8A-209ENST00000627620 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
SCN8A-209ENST00000627620 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.43■□□□□ 0.06
SCN8A-209ENST00000627620 TWISTNBQ3B726 338 aaPredicted RBP15.43■□□□□ 0.06
SCN8A-209ENST00000627620 BRMS1Q9HCU9 246 aa15.43■□□□□ 0.06
SCN8A-209ENST00000627620 FAM177BA6PVY3 158 aa15.42■□□□□ 0.06
SCN8A-209ENST00000627620 DNAJC2Q99543 621 aaKnown RBP15.42■□□□□ 0.06
SCN8A-209ENST00000627620 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
SCN8A-209ENST00000627620 NBPF1Q3BBV0 1214 aa15.42■□□□□ 0.06
SCN8A-209ENST00000627620 MTMR7Q9Y216 660 aa15.41■□□□□ 0.06
SCN8A-209ENST00000627620 XBP1P17861 261 aa15.41■□□□□ 0.06
SCN8A-209ENST00000627620 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
SCN8A-209ENST00000627620 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
SCN8A-209ENST00000627620 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
SCN8A-209ENST00000627620 KDM4AO75164 1064 aa15.4■□□□□ 0.06
SCN8A-209ENST00000627620 KIF6Q6ZMV9 814 aa15.4■□□□□ 0.06
SCN8A-209ENST00000627620 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
SCN8A-209ENST00000627620 C1orf115Q9H7X2 142 aa15.4■□□□□ 0.06
SCN8A-209ENST00000627620 SDF4Q9BRK5 362 aa15.39■□□□□ 0.05
SCN8A-209ENST00000627620 SART3Q15020 963 aaKnown RBP15.39■□□□□ 0.05
SCN8A-209ENST00000627620 OLFM4Q6UX06 510 aa15.39■□□□□ 0.05
SCN8A-209ENST00000627620 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
SCN8A-209ENST00000627620 NAP1L1P55209 391 aaKnown RBP15.39■□□□□ 0.05
SCN8A-209ENST00000627620 PDZRN3Q9UPQ7 1066 aa15.39■□□□□ 0.05
SCN8A-209ENST00000627620 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
SCN8A-209ENST00000627620 SETQ01105 290 aaPredicted RBP15.39■□□□□ 0.05
SCN8A-209ENST00000627620 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
SCN8A-209ENST00000627620 NAT10Q9H0A0 1025 aaKnown RBP15.38■□□□□ 0.05
SCN8A-209ENST00000627620 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
SCN8A-209ENST00000627620 GNAI2P04899 355 aa15.38■□□□□ 0.05
SCN8A-209ENST00000627620 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
SCN8A-209ENST00000627620 NOB1Q9ULX3 412 aaKnown RBP15.38■□□□□ 0.05
SCN8A-209ENST00000627620 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
SCN8A-209ENST00000627620 NEK4P51957 841 aa15.38■□□□□ 0.05
SCN8A-209ENST00000627620 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
SCN8A-209ENST00000627620 CDK19Q9BWU1 502 aa15.38■□□□□ 0.05
SCN8A-209ENST00000627620 STRN4Q9NRL3 753 aa15.38■□□□□ 0.05
SCN8A-209ENST00000627620 HFM1A2PYH4 1435 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 PRG4Q92954 1404 aaPredicted RBP15.37■□□□□ 0.05
SCN8A-209ENST00000627620 CFTRP13569 1480 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 HIP1O00291 1037 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 ERC1Q8IUD2 1116 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms