RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 MYOM1P52179 1685 aa18.54■□□□□ 0.56
PDXDC1-218ENST00000627450 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
PDXDC1-218ENST00000627450 SLC12A5Q9H2X9 1139 aa18.54■□□□□ 0.56
PDXDC1-218ENST00000627450 DLC1Q96QB1 1528 aa18.52■□□□□ 0.56
PDXDC1-218ENST00000627450 CCDC184Q52MB2 194 aa18.51■□□□□ 0.55
PDXDC1-218ENST00000627450 CC2D1BQ5T0F9 858 aaKnown RBP18.5■□□□□ 0.55
PDXDC1-218ENST00000627450 CDK19Q9BWU1 502 aa18.5■□□□□ 0.55
PDXDC1-218ENST00000627450 TECPR2O15040 1411 aa18.5■□□□□ 0.55
PDXDC1-218ENST00000627450 KCNA6P17658 529 aa18.48■□□□□ 0.55
PDXDC1-218ENST00000627450 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
PDXDC1-218ENST00000627450 CPS1P31327 1500 aa18.48■□□□□ 0.55
PDXDC1-218ENST00000627450 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
PDXDC1-218ENST00000627450 CARD14Q9BXL6 1004 aa18.47■□□□□ 0.55
PDXDC1-218ENST00000627450 NPHP4O75161 1426 aaPredicted RBP18.47■□□□□ 0.55
PDXDC1-218ENST00000627450 FAM135BQ49AJ0 1406 aa18.47■□□□□ 0.55
PDXDC1-218ENST00000627450 KNSTRNQ9Y448 316 aa18.46■□□□□ 0.55
PDXDC1-218ENST00000627450 CCER2I3L3R5 266 aa18.46■□□□□ 0.54
PDXDC1-218ENST00000627450 DIP2AQ14689 1571 aa18.45■□□□□ 0.54
PDXDC1-218ENST00000627450 NUTM2FA1L443 756 aa18.45■□□□□ 0.54
PDXDC1-218ENST00000627450 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
PDXDC1-218ENST00000627450 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
PDXDC1-218ENST00000627450 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.44■□□□□ 0.54
PDXDC1-218ENST00000627450 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
PDXDC1-218ENST00000627450 CABP1Q9NZU7 370 aa18.42■□□□□ 0.54
PDXDC1-218ENST00000627450 LMTK3Q96Q04 1460 aa18.41■□□□□ 0.54
PDXDC1-218ENST00000627450 KTN1Q86UP2 1357 aaKnown RBP18.41■□□□□ 0.54
PDXDC1-218ENST00000627450 XRN1Q8IZH2 1706 aaKnown RBP18.4■□□□□ 0.54
PDXDC1-218ENST00000627450 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
PDXDC1-218ENST00000627450 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
PDXDC1-218ENST00000627450 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.53
PDXDC1-218ENST00000627450 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
PDXDC1-218ENST00000627450 PTCH1Q13635 1447 aa18.39■□□□□ 0.53
PDXDC1-218ENST00000627450 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
PDXDC1-218ENST00000627450 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
PDXDC1-218ENST00000627450 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
PDXDC1-218ENST00000627450 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
PDXDC1-218ENST00000627450 PRR36Q9H6K5 1346 aa18.37■□□□□ 0.53
PDXDC1-218ENST00000627450 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
PDXDC1-218ENST00000627450 RALBP1Q15311 655 aa18.36■□□□□ 0.53
PDXDC1-218ENST00000627450 ANKRD36BQ8N2N9 1353 aa18.36■□□□□ 0.53
PDXDC1-218ENST00000627450 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
PDXDC1-218ENST00000627450 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
PDXDC1-218ENST00000627450 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
PDXDC1-218ENST00000627450 PPIP5K1Q6PFW1 1433 aa18.33■□□□□ 0.53
PDXDC1-218ENST00000627450 CCDC61Q9Y6R9 512 aa18.33■□□□□ 0.53
PDXDC1-218ENST00000627450 ATP7BP35670 1465 aa18.32■□□□□ 0.52
PDXDC1-218ENST00000627450 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
PDXDC1-218ENST00000627450 TNNT2P45379 298 aaPredicted RBP18.32■□□□□ 0.52
PDXDC1-218ENST00000627450 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
PDXDC1-218ENST00000627450 ADGRB2O60241 1585 aa18.31■□□□□ 0.52
PDXDC1-218ENST00000627450 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
PDXDC1-218ENST00000627450 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
PDXDC1-218ENST00000627450 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
PDXDC1-218ENST00000627450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDXDC1-218ENST00000627450 CGNL1Q0VF96 1302 aa18.29■□□□□ 0.52
PDXDC1-218ENST00000627450 NLRP13Q86W25 1043 aa18.28■□□□□ 0.52
PDXDC1-218ENST00000627450 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
PDXDC1-218ENST00000627450 RGPD8O14715 1765 aaPredicted RBP18.28■□□□□ 0.52
PDXDC1-218ENST00000627450 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
PDXDC1-218ENST00000627450 PROSER2Q86WR7 435 aaPredicted RBP18.28■□□□□ 0.52
PDXDC1-218ENST00000627450 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
PDXDC1-218ENST00000627450 NPC1L1Q9UHC9 1359 aa18.28■□□□□ 0.52
PDXDC1-218ENST00000627450 NALCNQ8IZF0 1738 aa18.27■□□□□ 0.52
PDXDC1-218ENST00000627450 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
PDXDC1-218ENST00000627450 SENP3-EIF4A1A0A087X0R7 540 aa18.26■□□□□ 0.51
PDXDC1-218ENST00000627450 STRCP1A6NGW2 1772 aa18.26■□□□□ 0.51
PDXDC1-218ENST00000627450 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
PDXDC1-218ENST00000627450 FYB1O15117 783 aa18.25■□□□□ 0.51
PDXDC1-218ENST00000627450 ACEP12821 1306 aa18.25■□□□□ 0.51
PDXDC1-218ENST00000627450 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
PDXDC1-218ENST00000627450 CPSF1Q10570 1443 aaKnown RBP18.24■□□□□ 0.51
PDXDC1-218ENST00000627450 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
PDXDC1-218ENST00000627450 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
PDXDC1-218ENST00000627450 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
PDXDC1-218ENST00000627450 ZRANB1Q9UGI0 708 aa18.22■□□□□ 0.51
PDXDC1-218ENST00000627450 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
PDXDC1-218ENST00000627450 ADGRL3Q9HAR2 1447 aa18.22■□□□□ 0.51
PDXDC1-218ENST00000627450 ZNF335Q9H4Z2 1342 aaPredicted RBP18.21■□□□□ 0.51
PDXDC1-218ENST00000627450 TOPAZ1Q8N9V7 1692 aa18.21■□□□□ 0.51
PDXDC1-218ENST00000627450 PLEKHG3A1L390 1219 aa18.21■□□□□ 0.51
PDXDC1-218ENST00000627450 FBLN1P23142 703 aa18.21■□□□□ 0.51
PDXDC1-218ENST00000627450 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
PDXDC1-218ENST00000627450 NME9Q86XW9 330 aa18.21■□□□□ 0.51
PDXDC1-218ENST00000627450 TMEM94Q12767 1356 aa18.2■□□□□ 0.5
PDXDC1-218ENST00000627450 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
PDXDC1-218ENST00000627450 FMN2Q9NZ56 1722 aa18.19■□□□□ 0.5
PDXDC1-218ENST00000627450 CENPBP07199 599 aaPredicted RBP18.18■□□□□ 0.5
PDXDC1-218ENST00000627450 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
PDXDC1-218ENST00000627450 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
PDXDC1-218ENST00000627450 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
PDXDC1-218ENST00000627450 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
PDXDC1-218ENST00000627450 ESCO1Q5FWF5 840 aa18.17■□□□□ 0.5
PDXDC1-218ENST00000627450 MON2Q7Z3U7 1717 aa18.16■□□□□ 0.5
PDXDC1-218ENST00000627450 ORAI2Q96SN7 254 aa18.16■□□□□ 0.5
PDXDC1-218ENST00000627450 NSD2O96028 1365 aa18.16■□□□□ 0.5
PDXDC1-218ENST00000627450 C19orf44Q9H6X5 657 aa18.16■□□□□ 0.5
PDXDC1-218ENST00000627450 MTHFSP49914 203 aa18.15■□□□□ 0.5
PDXDC1-218ENST00000627450 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
PDXDC1-218ENST00000627450 USP6P35125 1406 aa18.15■□□□□ 0.5
PDXDC1-218ENST00000627450 TTC21BQ7Z4L5 1316 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms