RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 DHX57Q6P158 1386 aaKnown RBP5.31□□□□□ -1.56
SCARNA15.3-201ENST00000626315 SOS2Q07890 1332 aaPredicted RBP5.31□□□□□ -1.56
SCARNA15.3-201ENST00000626315 ADGRB2O60241 1585 aa5.31□□□□□ -1.56
SCARNA15.3-201ENST00000626315 GLI3P10071 1580 aa5.31□□□□□ -1.56
SCARNA15.3-201ENST00000626315 MAST1Q9Y2H9 1570 aa5.31□□□□□ -1.56
SCARNA15.3-201ENST00000626315 CHGAP10645 457 aaKnown RBP5.31□□□□□ -1.56
SCARNA15.3-201ENST00000626315 POLD1P28340 1107 aa5.31□□□□□ -1.56
SCARNA15.3-201ENST00000626315 YBX3P16989 372 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCARNA15.3-201ENST00000626315 HDGFP51858 240 aaKnown RBP5.3□□□□□ -1.56
SCARNA15.3-201ENST00000626315 CNKSR2Q8WXI2 1034 aa5.3□□□□□ -1.56
SCARNA15.3-201ENST00000626315 RGPD1P0DJD0 1748 aa5.3□□□□□ -1.56
SCARNA15.3-201ENST00000626315 SLIT1O75093 1534 aa5.29□□□□□ -1.56
SCARNA15.3-201ENST00000626315 LBX1P52954 281 aa5.29□□□□□ -1.56
SCARNA15.3-201ENST00000626315 SGIP1Q9BQI5 828 aa5.29□□□□□ -1.56
SCARNA15.3-201ENST00000626315 KIDINS220Q9ULH0 1771 aa5.29□□□□□ -1.56
SCARNA15.3-201ENST00000626315 SLIT2O94813 1529 aa5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 BRWD3Q6RI45 1802 aa5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 RANGAP1P46060 587 aaPredicted RBP5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 PDE3BQ13370 1112 aa5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 ANO8Q9HCE9 1232 aaPredicted RBP5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 TBX22Q9Y458 520 aa5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 ADCY9O60503 1353 aa5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 MYOM1P52179 1685 aa5.28□□□□□ -1.56
SCARNA15.3-201ENST00000626315 RPRD2Q5VT52 1461 aaKnown RBP5.27□□□□□ -1.57
SCARNA15.3-201ENST00000626315 DCCP43146 1447 aa5.27□□□□□ -1.57
SCARNA15.3-201ENST00000626315 HABP4Q5JVS0 413 aaKnown RBP5.27□□□□□ -1.57
SCARNA15.3-201ENST00000626315 KIAA1210Q9ULL0 1709 aa5.27□□□□□ -1.57
SCARNA15.3-201ENST00000626315 WDR90Q96KV7 1748 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 ABCC5O15440 1437 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 MST1RQ04912 1400 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 SLC15A2Q16348 729 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 SMC1BQ8NDV3 1235 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 NLGN2Q8NFZ4 835 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 PMFBP1Q8TBY8 1022 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 AMOTL2Q9Y2J4 779 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 DHX29Q7Z478 1369 aaKnown RBP5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 MYOM2P54296 1465 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 MYO5CQ9NQX4 1742 aa5.26□□□□□ -1.57
SCARNA15.3-201ENST00000626315 SAMD9LQ8IVG5 1584 aa5.25□□□□□ -1.57
SCARNA15.3-201ENST00000626315 CLIP1P30622 1438 aa5.25□□□□□ -1.57
SCARNA15.3-201ENST00000626315 HOXD11P31277 338 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15.3-201ENST00000626315 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
SCARNA15.3-201ENST00000626315 CUL9Q8IWT3 2517 aa5.25□□□□□ -1.57
SCARNA15.3-201ENST00000626315 SAMD9Q5K651 1589 aa5.25□□□□□ -1.57
SCARNA15.3-201ENST00000626315 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15.3-201ENST00000626315 PLSCR1O15162 318 aa5.24□□□□□ -1.57
SCARNA15.3-201ENST00000626315 ORAI2Q96SN7 254 aa5.24□□□□□ -1.57
SCARNA15.3-201ENST00000626315 PLXNC1O60486 1568 aa5.24□□□□□ -1.57
SCARNA15.3-201ENST00000626315 NPHP3Q7Z494 1330 aa5.23□□□□□ -1.57
SCARNA15.3-201ENST00000626315 C11orf95C9JLR9 678 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15.3-201ENST00000626315 PLEKHG5O94827 1062 aa5.23□□□□□ -1.57
SCARNA15.3-201ENST00000626315 MKRN1Q9UHC7 482 aaKnown RBP5.23□□□□□ -1.57
SCARNA15.3-201ENST00000626315 ERVK-7P63135 1459 aa5.23□□□□□ -1.57
SCARNA15.3-201ENST00000626315 TET3O43151 1660 aa5.22□□□□□ -1.57
SCARNA15.3-201ENST00000626315 NBPF15Q8N660 670 aa5.22□□□□□ -1.57
SCARNA15.3-201ENST00000626315 RNF216Q9NWF9 866 aaPredicted RBP5.22□□□□□ -1.57
SCARNA15.3-201ENST00000626315 GPATCH8Q9UKJ3 1502 aaKnown RBP5.22□□□□□ -1.57
SCARNA15.3-201ENST00000626315 ADGRL3Q9HAR2 1447 aa5.22□□□□□ -1.57
SCARNA15.3-201ENST00000626315 MNX1P50219 401 aaPredicted RBP5.21□□□□□ -1.58
SCARNA15.3-201ENST00000626315 XPCQ01831 940 aaPredicted RBP5.21□□□□□ -1.58
SCARNA15.3-201ENST00000626315 BTG4Q9NY30 223 aa5.21□□□□□ -1.58
SCARNA15.3-201ENST00000626315 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 PIK3R4Q99570 1358 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 EFCAB6Q5THR3 1501 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 HSPA8P11142 646 aaKnown RBP5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 IDI1Q13907 227 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 NCBP3Q53F19 620 aaKnown RBP5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 SLC16A10Q8TF71 515 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 TROQ12816 1431 aaPredicted RBP5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 SPATA31A5Q5VU36 1347 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 SPATA31A7Q8IWB4 1347 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 NUP188Q5SRE5 1749 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 UBR1Q8IWV7 1749 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 CACNA1AO00555 2505 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 FYCO1Q9BQS8 1478 aa5.2□□□□□ -1.58
SCARNA15.3-201ENST00000626315 LRPPRCP42704 1394 aaKnown RBP5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 PLEKHG1Q9ULL1 1385 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 SYCP2Q9BX26 1530 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 FOXO3O43524 673 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 NPM3O75607 178 aaKnown RBP5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 FXR1P51114 621 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 ESCO1Q5FWF5 840 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 BEGAINQ9BUH8 593 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 WBP1LQ9NX94 342 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 ZNF219Q9P2Y4 722 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 KDM2BQ8NHM5 1336 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 C1orf167Q5SNV9 1468 aa5.19□□□□□ -1.58
SCARNA15.3-201ENST00000626315 TNS1Q9HBL0 1735 aaKnown RBP5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 SOX10P56693 466 aa5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 TXNRD1Q16881 649 aa5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 SNX27Q96L92 541 aa5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 MCOLN1Q9GZU1 580 aa5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 RRAGCQ9HB90 399 aa5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 CFDP1Q9UEE9 299 aaPredicted RBP5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 TMEM131LA2VDJ0 1609 aa5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 RREB1Q92766 1687 aa5.18□□□□□ -1.58
SCARNA15.3-201ENST00000626315 NOS1P29475 1434 aa5.17□□□□□ -1.58
SCARNA15.3-201ENST00000626315 MAP2K1Q02750 393 aaPredicted RBP5.17□□□□□ -1.58
SCARNA15.3-201ENST00000626315 LMOD2Q6P5Q4 547 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms