RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 RIMBP3CA6NJZ7 1639 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 RIMBP3BA6NNM3 1639 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 ABCA6Q8N139 1617 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 RIMBP3Q9UFD9 1639 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 ASXL2Q76L83 1435 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 BRD4O60885 1362 aaPredicted RBP5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 RGS20O76081 388 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 PDE4AP27815 886 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 SGIP1Q9BQI5 828 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 MADDQ8WXG6 1647 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 ZMYM4Q5VZL5 1548 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 FANCAO15360 1455 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 RRP1P56182 461 aaKnown RBP5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 UBE2Q2Q8WVN8 375 aa5.54□□□□□ -1.52
PTP4A1-205ENST00000626021 CLTCL1P53675 1640 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 TRAPPC8Q9Y2L5 1435 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 MROH2AA6NES4 1674 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 PLCD3Q8N3E9 789 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 IL27Q8NEV9 243 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 PLA2G2EQ9NZK7 142 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 EFCAB6Q5THR3 1501 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 LMTK2Q8IWU2 1503 aa5.53□□□□□ -1.52
PTP4A1-205ENST00000626021 FRMPD1Q5SYB0 1578 aa5.52□□□□□ -1.52
PTP4A1-205ENST00000626021 KIF13AQ9H1H9 1805 aa5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 NEFMP07197 916 aa5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 CAMSAP1Q5T5Y3 1602 aa5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 PPLO60437 1756 aa5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 RALBP1Q15311 655 aa5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 TSPYL2Q9H2G4 693 aaPredicted RBP5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 ADGRL1O94910 1474 aa5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 DIP2BQ9P265 1576 aa5.52□□□□□ -1.53
PTP4A1-205ENST00000626021 PLA2R1Q13018 1463 aa5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 ZNF518AQ6AHZ1 1483 aa5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 NEO1Q92859 1461 aa5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 MAP3K13O43283 966 aa5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 VASPP50552 380 aaPredicted RBP5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 IRX5P78411 483 aaPredicted RBP5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 GSE1Q14687 1217 aa5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 ZNF777Q9ULD5 760 aaPredicted RBP5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 DIP2CQ9Y2E4 1556 aa5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 POGZQ7Z3K3 1410 aa5.51□□□□□ -1.53
PTP4A1-205ENST00000626021 NUP155O75694 1391 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 PIK3C2BO00750 1634 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 REREQ9P2R6 1566 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 TSPY4P0CV99 314 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 TSPY10P0CW01 314 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 HNRNPMP52272 730 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 EXOC6Q8TAG9 804 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 TMC1Q8TDI8 760 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 USP47Q96K76 1375 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 MYO3AQ8NEV4 1616 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 A2MP01023 1474 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 MLH3Q9UHC1 1453 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 SIGLEC1Q9BZZ2 1709 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 EFCAB2Q5VUJ9 269 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 RCAN3Q9UKA8 241 aa5.5□□□□□ -1.53
PTP4A1-205ENST00000626021 VIRMAQ69YN4 1812 aaKnown RBP5.49□□□□□ -1.53
PTP4A1-205ENST00000626021 PTPRTO14522 1441 aa5.49□□□□□ -1.53
PTP4A1-205ENST00000626021 MYO5BQ9ULV0 1848 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 NFKBIBQ15653 356 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 OCEL1Q9H607 264 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 MYOM1P52179 1685 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 PRAG1Q86YV5 1406 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 GPRASP1Q5JY77 1395 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 PKD2Q13563 968 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 RSPH6AQ9H0K4 717 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 LAS1LQ9Y4W2 734 aaKnown RBP5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 ADGRB3O60242 1522 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 CCDC144AA2RUR9 1427 aa5.48□□□□□ -1.53
PTP4A1-205ENST00000626021 NPM2Q86SE8 214 aaKnown RBP5.47□□□□□ -1.53
PTP4A1-205ENST00000626021 FAM43AQ8N2R8 423 aa5.47□□□□□ -1.53
PTP4A1-205ENST00000626021 PREX1Q8TCU6 1659 aa5.47□□□□□ -1.53
PTP4A1-205ENST00000626021 PARD3Q8TEW0 1356 aa5.47□□□□□ -1.53
PTP4A1-205ENST00000626021 TSPOAP1O95153 1857 aa5.47□□□□□ -1.53
PTP4A1-205ENST00000626021 SCAPERQ9BY12 1400 aa5.47□□□□□ -1.53
PTP4A1-205ENST00000626021 CFAP65Q6ZU64 1925 aaKnown RBP5.47□□□□□ -1.53
PTP4A1-205ENST00000626021 MYOM2P54296 1465 aa5.46□□□□□ -1.53
PTP4A1-205ENST00000626021 ABCC3O15438 1527 aa5.46□□□□□ -1.54
PTP4A1-205ENST00000626021 NLRP13Q86W25 1043 aa5.46□□□□□ -1.54
PTP4A1-205ENST00000626021 BLMP54132 1417 aaPredicted RBP5.46□□□□□ -1.54
PTP4A1-205ENST00000626021 IRX2Q9BZI1 471 aaPredicted RBP5.46□□□□□ -1.54
PTP4A1-205ENST00000626021 RTN4Q9NQC3 1192 aaKnown RBP5.46□□□□□ -1.54
PTP4A1-205ENST00000626021 SETBP1Q9Y6X0 1596 aa5.46□□□□□ -1.54
PTP4A1-205ENST00000626021 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 SPAG9O60271 1321 aaKnown RBP5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 KDM2BQ8NHM5 1336 aa5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 KDM5AP29375 1690 aaKnown RBP5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 CD109Q6YHK3 1445 aa5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 KLHL34Q8N239 644 aa5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 FRAT1Q92837 279 aaPredicted RBP5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 SYNMO15061 1565 aa5.45□□□□□ -1.54
PTP4A1-205ENST00000626021 FAM161AQ3B820 660 aa5.44□□□□□ -1.54
PTP4A1-205ENST00000626021 CENPQQ7L2Z9 268 aaPredicted RBP5.44□□□□□ -1.54
PTP4A1-205ENST00000626021 NRXN1Q9ULB1 1477 aa5.44□□□□□ -1.54
PTP4A1-205ENST00000626021 ARHGEF40Q8TER5 1519 aa5.44□□□□□ -1.54
PTP4A1-205ENST00000626021 ARHGEF28Q8N1W1 1705 aaKnown RBP5.44□□□□□ -1.54
PTP4A1-205ENST00000626021 SPOCK2Q92563 424 aa5.44□□□□□ -1.54
PTP4A1-205ENST00000626021 BRPF3Q9ULD4 1205 aa5.44□□□□□ -1.54
PTP4A1-205ENST00000626021 QRICH2Q9H0J4 1663 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms