RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 POGKQ9P215 609 aa17.8■□□□□ 0.44
C3orf56-201ENST00000624688 MINK1Q8N4C8 1332 aaPredicted RBP17.8■□□□□ 0.44
C3orf56-201ENST00000624688 METP08581 1390 aa17.79■□□□□ 0.44
C3orf56-201ENST00000624688 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
C3orf56-201ENST00000624688 FKBP8Q14318 412 aa17.79■□□□□ 0.44
C3orf56-201ENST00000624688 BLMP54132 1417 aaPredicted RBP17.79■□□□□ 0.44
C3orf56-201ENST00000624688 HDGFP51858 240 aaKnown RBP17.78■□□□□ 0.44
C3orf56-201ENST00000624688 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
C3orf56-201ENST00000624688 SMG6Q86US8 1419 aaKnown RBP17.78■□□□□ 0.44
C3orf56-201ENST00000624688 SENP3-EIF4A1A0A087X0R7 540 aa17.78■□□□□ 0.44
C3orf56-201ENST00000624688 KNDC1Q76NI1 1749 aa17.77■□□□□ 0.44
C3orf56-201ENST00000624688 PLEKHH1Q9ULM0 1364 aa17.76■□□□□ 0.43
C3orf56-201ENST00000624688 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
C3orf56-201ENST00000624688 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
C3orf56-201ENST00000624688 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
C3orf56-201ENST00000624688 NEFLP07196 543 aa17.75■□□□□ 0.43
C3orf56-201ENST00000624688 WAPLQ7Z5K2 1190 aa17.75■□□□□ 0.43
C3orf56-201ENST00000624688 ADAMTS13Q76LX8 1427 aa17.74■□□□□ 0.43
C3orf56-201ENST00000624688 TECPR2O15040 1411 aa17.74■□□□□ 0.43
C3orf56-201ENST00000624688 LTKP29376 864 aa17.73■□□□□ 0.43
C3orf56-201ENST00000624688 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
C3orf56-201ENST00000624688 PLEKHG1Q9ULL1 1385 aa17.73■□□□□ 0.43
C3orf56-201ENST00000624688 CD163L1Q9NR16 1453 aa17.73■□□□□ 0.43
C3orf56-201ENST00000624688 ARHGAP23Q9P227 1491 aa17.73■□□□□ 0.43
C3orf56-201ENST00000624688 SLIT1O75093 1534 aa17.73■□□□□ 0.43
C3orf56-201ENST00000624688 ADAMTS8Q9UP79 889 aa17.72■□□□□ 0.43
C3orf56-201ENST00000624688 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
C3orf56-201ENST00000624688 CPS1P31327 1500 aa17.72■□□□□ 0.43
C3orf56-201ENST00000624688 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
C3orf56-201ENST00000624688 FAM135BQ49AJ0 1406 aa17.71■□□□□ 0.43
C3orf56-201ENST00000624688 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.43
C3orf56-201ENST00000624688 MED14O60244 1454 aa17.7■□□□□ 0.42
C3orf56-201ENST00000624688 SIRT1Q96EB6 747 aa17.7■□□□□ 0.42
C3orf56-201ENST00000624688 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
C3orf56-201ENST00000624688 MORC1Q86VD1 984 aa17.69■□□□□ 0.42
C3orf56-201ENST00000624688 NSD2O96028 1365 aa17.69■□□□□ 0.42
C3orf56-201ENST00000624688 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
C3orf56-201ENST00000624688 TXNDC2Q86VQ3 553 aa17.69■□□□□ 0.42
C3orf56-201ENST00000624688 WDR43Q15061 677 aaKnown RBP eCLIP17.68■□□□□ 0.42
C3orf56-201ENST00000624688 BCANQ96GW7 911 aa17.68■□□□□ 0.42
C3orf56-201ENST00000624688 POLR3AO14802 1390 aaPredicted RBP17.68■□□□□ 0.42
C3orf56-201ENST00000624688 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
C3orf56-201ENST00000624688 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
C3orf56-201ENST00000624688 ADAMTSL3P82987 1691 aa17.66■□□□□ 0.42
C3orf56-201ENST00000624688 SHPRHQ149N8 1683 aa17.65■□□□□ 0.42
C3orf56-201ENST00000624688 ROBO2Q9HCK4 1378 aa17.65■□□□□ 0.42
C3orf56-201ENST00000624688 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
C3orf56-201ENST00000624688 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
C3orf56-201ENST00000624688 EID1Q9Y6B2 187 aa17.64■□□□□ 0.41
C3orf56-201ENST00000624688 PTPRUQ92729 1446 aa17.64■□□□□ 0.41
C3orf56-201ENST00000624688 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
C3orf56-201ENST00000624688 TNNT2P45379 298 aaPredicted RBP17.64■□□□□ 0.41
C3orf56-201ENST00000624688 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
C3orf56-201ENST00000624688 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
C3orf56-201ENST00000624688 ATP7BP35670 1465 aa17.63■□□□□ 0.41
C3orf56-201ENST00000624688 CEP170BQ9Y4F5 1589 aaPredicted RBP17.63■□□□□ 0.41
C3orf56-201ENST00000624688 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
C3orf56-201ENST00000624688 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.62■□□□□ 0.41
C3orf56-201ENST00000624688 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
C3orf56-201ENST00000624688 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
C3orf56-201ENST00000624688 SLC26A8Q96RN1 970 aa17.61■□□□□ 0.41
C3orf56-201ENST00000624688 ADGRB2O60241 1585 aa17.61■□□□□ 0.41
C3orf56-201ENST00000624688 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
C3orf56-201ENST00000624688 FYB1O15117 783 aa17.61■□□□□ 0.41
C3orf56-201ENST00000624688 CDCA7LQ96GN5 454 aa17.6■□□□□ 0.41
C3orf56-201ENST00000624688 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
C3orf56-201ENST00000624688 DIP2AQ14689 1571 aa17.6■□□□□ 0.41
C3orf56-201ENST00000624688 MTHFSP49914 203 aa17.59■□□□□ 0.41
C3orf56-201ENST00000624688 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
C3orf56-201ENST00000624688 GGNBP2Q9H3C7 697 aa17.59■□□□□ 0.41
C3orf56-201ENST00000624688 PPIP5K1Q6PFW1 1433 aa17.58■□□□□ 0.41
C3orf56-201ENST00000624688 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.4
C3orf56-201ENST00000624688 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
C3orf56-201ENST00000624688 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.4
C3orf56-201ENST00000624688 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
C3orf56-201ENST00000624688 NUDT16Q96DE0 195 aaKnown RBP17.57■□□□□ 0.4
C3orf56-201ENST00000624688 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
C3orf56-201ENST00000624688 PRR36Q9H6K5 1346 aa17.55■□□□□ 0.4
C3orf56-201ENST00000624688 MON2Q7Z3U7 1717 aa17.55■□□□□ 0.4
C3orf56-201ENST00000624688 XRN1Q8IZH2 1706 aaKnown RBP17.55■□□□□ 0.4
C3orf56-201ENST00000624688 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
C3orf56-201ENST00000624688 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
C3orf56-201ENST00000624688 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
C3orf56-201ENST00000624688 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
C3orf56-201ENST00000624688 TOPAZ1Q8N9V7 1692 aa17.54■□□□□ 0.4
C3orf56-201ENST00000624688 CFAP53Q96M91 514 aa17.53■□□□□ 0.4
C3orf56-201ENST00000624688 CCDC61Q9Y6R9 512 aa17.53■□□□□ 0.4
C3orf56-201ENST00000624688 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
C3orf56-201ENST00000624688 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
C3orf56-201ENST00000624688 APAF1O14727 1248 aa17.52■□□□□ 0.4
C3orf56-201ENST00000624688 ITSN1Q15811 1721 aa17.52■□□□□ 0.4
C3orf56-201ENST00000624688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.5■□□□□ 0.39
C3orf56-201ENST00000624688 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
C3orf56-201ENST00000624688 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
C3orf56-201ENST00000624688 PPP4R2Q9NY27 417 aa17.49■□□□□ 0.39
C3orf56-201ENST00000624688 PIK3R4Q99570 1358 aa17.48■□□□□ 0.39
C3orf56-201ENST00000624688 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
C3orf56-201ENST00000624688 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
C3orf56-201ENST00000624688 NGEFQ8N5V2 710 aa17.47■□□□□ 0.39
C3orf56-201ENST00000624688 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms