RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
CBWD3-216ENST00000621396 PRKRIP1Q9H875 184 aaPredicted RBP21.87■■□□□ 1.09
CBWD3-216ENST00000621396 KCNA6P17658 529 aa21.85■■□□□ 1.09
CBWD3-216ENST00000621396 CDK19Q9BWU1 502 aa21.85■■□□□ 1.09
CBWD3-216ENST00000621396 SLC24A1O60721 1099 aa21.84■■□□□ 1.09
CBWD3-216ENST00000621396 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
CBWD3-216ENST00000621396 NUTM2FA1L443 756 aa21.84■■□□□ 1.09
CBWD3-216ENST00000621396 CCDC184Q52MB2 194 aa21.82■■□□□ 1.08
CBWD3-216ENST00000621396 NPHP4O75161 1426 aaPredicted RBP21.81■■□□□ 1.08
CBWD3-216ENST00000621396 DLC1Q96QB1 1528 aa21.81■■□□□ 1.08
CBWD3-216ENST00000621396 CARD14Q9BXL6 1004 aa21.8■■□□□ 1.08
CBWD3-216ENST00000621396 TECPR2O15040 1411 aa21.8■■□□□ 1.08
CBWD3-216ENST00000621396 MYOM1P52179 1685 aa21.8■■□□□ 1.08
CBWD3-216ENST00000621396 KNSTRNQ9Y448 316 aa21.77■■□□□ 1.08
CBWD3-216ENST00000621396 WASLO00401 505 aaPredicted RBP21.77■■□□□ 1.08
CBWD3-216ENST00000621396 FAM135BQ49AJ0 1406 aa21.77■■□□□ 1.08
CBWD3-216ENST00000621396 CPS1P31327 1500 aa21.76■■□□□ 1.07
CBWD3-216ENST00000621396 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
CBWD3-216ENST00000621396 LMTK3Q96Q04 1460 aa21.76■■□□□ 1.07
CBWD3-216ENST00000621396 SIRT1Q96EB6 747 aa21.75■■□□□ 1.07
CBWD3-216ENST00000621396 DIP2AQ14689 1571 aa21.73■■□□□ 1.07
CBWD3-216ENST00000621396 KNDC1Q76NI1 1749 aa21.73■■□□□ 1.07
CBWD3-216ENST00000621396 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.72■■□□□ 1.07
CBWD3-216ENST00000621396 AMER1Q5JTC6 1135 aaPredicted RBP21.71■■□□□ 1.07
CBWD3-216ENST00000621396 CCER2I3L3R5 266 aa21.7■■□□□ 1.06
CBWD3-216ENST00000621396 NUDT16Q96DE0 195 aaKnown RBP21.7■■□□□ 1.06
CBWD3-216ENST00000621396 KTN1Q86UP2 1357 aaKnown RBP21.69■■□□□ 1.06
CBWD3-216ENST00000621396 PRR36Q9H6K5 1346 aa21.69■■□□□ 1.06
CBWD3-216ENST00000621396 PIK3R4Q99570 1358 aa21.69■■□□□ 1.06
CBWD3-216ENST00000621396 MRS2Q9HD23 443 aa21.68■■□□□ 1.06
CBWD3-216ENST00000621396 PTCH1Q13635 1447 aa21.68■■□□□ 1.06
CBWD3-216ENST00000621396 NSD3Q9BZ95 1437 aa21.68■■□□□ 1.06
CBWD3-216ENST00000621396 ATAD2Q6PL18 1390 aa21.68■■□□□ 1.06
CBWD3-216ENST00000621396 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
CBWD3-216ENST00000621396 XRN1Q8IZH2 1706 aaKnown RBP21.68■■□□□ 1.06
CBWD3-216ENST00000621396 A0A1W2PP64 1363 aa21.68■■□□□ 1.06
CBWD3-216ENST00000621396 CHD2O14647 1828 aaKnown RBP21.65■■□□□ 1.06
CBWD3-216ENST00000621396 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-216ENST00000621396 C14orf37Q86TY3 774 aa21.65■■□□□ 1.06
CBWD3-216ENST00000621396 ANKRD36BQ8N2N9 1353 aa21.64■■□□□ 1.06
CBWD3-216ENST00000621396 CCDC61Q9Y6R9 512 aa21.64■■□□□ 1.05
CBWD3-216ENST00000621396 PPIP5K1Q6PFW1 1433 aa21.64■■□□□ 1.05
CBWD3-216ENST00000621396 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
CBWD3-216ENST00000621396 RALBP1Q15311 655 aa21.63■■□□□ 1.05
CBWD3-216ENST00000621396 FAM9BQ8IZU0 186 aa21.63■■□□□ 1.05
CBWD3-216ENST00000621396 CD163L1Q9NR16 1453 aa21.63■■□□□ 1.05
CBWD3-216ENST00000621396 PMFBP1Q8TBY8 1022 aa21.62■■□□□ 1.05
CBWD3-216ENST00000621396 PROSER2Q86WR7 435 aaPredicted RBP21.61■■□□□ 1.05
CBWD3-216ENST00000621396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
CBWD3-216ENST00000621396 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
CBWD3-216ENST00000621396 MYBBP1AQ9BQG0 1328 aaKnown RBP21.61■■□□□ 1.05
CBWD3-216ENST00000621396 ATP7BP35670 1465 aa21.6■■□□□ 1.05
CBWD3-216ENST00000621396 HDGFL2Q7Z4V5 671 aaPredicted RBP21.59■■□□□ 1.05
CBWD3-216ENST00000621396 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
CBWD3-216ENST00000621396 SENP3-EIF4A1A0A087X0R7 540 aa21.59■■□□□ 1.05
CBWD3-216ENST00000621396 GGNBP2Q9H3C7 697 aa21.59■■□□□ 1.05
CBWD3-216ENST00000621396 NINLQ9Y2I6 1382 aa21.56■■□□□ 1.04
CBWD3-216ENST00000621396 CGNL1Q0VF96 1302 aa21.56■■□□□ 1.04
CBWD3-216ENST00000621396 ADGRB2O60241 1585 aa21.55■■□□□ 1.04
CBWD3-216ENST00000621396 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
CBWD3-216ENST00000621396 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
CBWD3-216ENST00000621396 ACEP12821 1306 aa21.54■■□□□ 1.04
CBWD3-216ENST00000621396 FYB1O15117 783 aa21.54■■□□□ 1.04
CBWD3-216ENST00000621396 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
CBWD3-216ENST00000621396 NLRP13Q86W25 1043 aa21.54■■□□□ 1.04
CBWD3-216ENST00000621396 NALCNQ8IZF0 1738 aa21.53■■□□□ 1.04
CBWD3-216ENST00000621396 FBLN1P23142 703 aa21.53■■□□□ 1.04
CBWD3-216ENST00000621396 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
CBWD3-216ENST00000621396 STRCP1A6NGW2 1772 aa21.52■■□□□ 1.04
CBWD3-216ENST00000621396 RGPD8O14715 1765 aaPredicted RBP21.52■■□□□ 1.03
CBWD3-216ENST00000621396 NKTRP30414 1462 aaKnown RBP21.52■■□□□ 1.03
CBWD3-216ENST00000621396 TMEM94Q12767 1356 aa21.51■■□□□ 1.03
CBWD3-216ENST00000621396 USP32Q8NFA0 1604 aa21.51■■□□□ 1.03
CBWD3-216ENST00000621396 CPSF1Q10570 1443 aaKnown RBP21.51■■□□□ 1.03
CBWD3-216ENST00000621396 NME9Q86XW9 330 aa21.5■■□□□ 1.03
CBWD3-216ENST00000621396 NPC1L1Q9UHC9 1359 aa21.5■■□□□ 1.03
CBWD3-216ENST00000621396 NGDNQ8NEJ9 315 aaKnown RBP21.5■■□□□ 1.03
CBWD3-216ENST00000621396 ADGRL3Q9HAR2 1447 aa21.49■■□□□ 1.03
CBWD3-216ENST00000621396 NWD1Q149M9 1564 aa21.49■■□□□ 1.03
CBWD3-216ENST00000621396 ESCO1Q5FWF5 840 aa21.48■■□□□ 1.03
CBWD3-216ENST00000621396 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
CBWD3-216ENST00000621396 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
CBWD3-216ENST00000621396 ORAI2Q96SN7 254 aa21.47■■□□□ 1.03
CBWD3-216ENST00000621396 BRD4O60885 1362 aaPredicted RBP21.47■■□□□ 1.03
CBWD3-216ENST00000621396 C19orf44Q9H6X5 657 aa21.46■■□□□ 1.03
CBWD3-216ENST00000621396 CDC42BPGQ6DT37 1551 aa21.46■■□□□ 1.03
CBWD3-216ENST00000621396 HNRNPUQ00839 825 aaKnown RBP eCLIP21.45■■□□□ 1.02
CBWD3-216ENST00000621396 ZNF692Q9BU19 519 aaPredicted RBP21.44■■□□□ 1.02
CBWD3-216ENST00000621396 XPCQ01831 940 aaPredicted RBP21.43■■□□□ 1.02
CBWD3-216ENST00000621396 TOPAZ1Q8N9V7 1692 aa21.43■■□□□ 1.02
CBWD3-216ENST00000621396 EDC4Q6P2E9 1401 aaKnown RBP21.42■■□□□ 1.02
CBWD3-216ENST00000621396 FMN2Q9NZ56 1722 aa21.42■■□□□ 1.02
CBWD3-216ENST00000621396 MTHFSP49914 203 aa21.42■■□□□ 1.02
CBWD3-216ENST00000621396 PHF8Q9UPP1 1060 aa21.42■■□□□ 1.02
CBWD3-216ENST00000621396 TTC21BQ7Z4L5 1316 aa21.41■■□□□ 1.02
CBWD3-216ENST00000621396 SOX12O15370 315 aa21.41■■□□□ 1.02
CBWD3-216ENST00000621396 FOXO3O43524 673 aa21.41■■□□□ 1.02
CBWD3-216ENST00000621396 NUTM2GQ5VZR2 741 aa21.41■■□□□ 1.02
CBWD3-216ENST00000621396 USP6P35125 1406 aa21.4■■□□□ 1.02
CBWD3-216ENST00000621396 PAK3O75914 559 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms