RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 HNRNPUQ00839 825 aaKnown RBP eCLIP5.64□□□□□ -1.51
CHL1-216ENST00000620033 CCDC97Q96F63 343 aaPredicted RBP5.64□□□□□ -1.51
CHL1-216ENST00000620033 SETD5Q9C0A6 1442 aa5.64□□□□□ -1.51
CHL1-216ENST00000620033 SNAPC4Q5SXM2 1469 aa5.64□□□□□ -1.51
CHL1-216ENST00000620033 RBM26Q5T8P6 1007 aaKnown RBP5.64□□□□□ -1.51
CHL1-216ENST00000620033 IPO8O15397 1037 aaKnown RBP5.63□□□□□ -1.51
CHL1-216ENST00000620033 DNAI2Q9GZS0 605 aa5.63□□□□□ -1.51
CHL1-216ENST00000620033 RAB3GAP2Q9H2M9 1393 aa5.63□□□□□ -1.51
CHL1-216ENST00000620033 TRIM6-TRIM34B2RNG4 842 aa5.63□□□□□ -1.51
CHL1-216ENST00000620033 ACSBG1Q96GR2 724 aa5.63□□□□□ -1.51
CHL1-216ENST00000620033 DNAJC5Q9H3Z4 198 aa5.63□□□□□ -1.51
CHL1-216ENST00000620033 SKIV2LQ15477 1246 aaKnown RBP5.63□□□□□ -1.51
CHL1-216ENST00000620033 MIA2Q96PC5 1412 aa5.63□□□□□ -1.51
CHL1-216ENST00000620033 FAM135AQ9P2D6 1515 aa5.63□□□□□ -1.51
CHL1-216ENST00000620033 CRACR2BQ8N4Y2 399 aaPredicted RBP5.63□□□□□ -1.51
CHL1-216ENST00000620033 LRRC59Q96AG4 307 aaKnown RBP5.63□□□□□ -1.51
CHL1-216ENST00000620033 QTRT2Q9H974 415 aaKnown RBP5.63□□□□□ -1.51
CHL1-216ENST00000620033 STK25O00506 426 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 CIZ1Q9ULV3 898 aaPredicted RBP5.62□□□□□ -1.51
CHL1-216ENST00000620033 RRP7AQ9Y3A4 280 aaKnown RBP5.62□□□□□ -1.51
CHL1-216ENST00000620033 FANCAO15360 1455 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 A0A087WZG4 1122 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 GOLGA6L22H0YM25 854 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 FCHSD2O94868 740 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 NFXL1Q6ZNB6 911 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 MPRIPQ6WCQ1 1025 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 NUTM1Q86Y26 1132 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 MPHOSPH8Q99549 860 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 MROH2BQ7Z745 1585 aa5.62□□□□□ -1.51
CHL1-216ENST00000620033 ZBTB24O43167 697 aaPredicted RBP5.61□□□□□ -1.51
CHL1-216ENST00000620033 CCDC87Q9NVE4 849 aa5.61□□□□□ -1.51
CHL1-216ENST00000620033 DDX10Q13206 875 aaKnown RBP5.61□□□□□ -1.51
CHL1-216ENST00000620033 ZBTB33Q86T24 672 aa5.61□□□□□ -1.51
CHL1-216ENST00000620033 HINFPQ9BQA5 517 aa5.61□□□□□ -1.51
CHL1-216ENST00000620033 BCS1LQ9Y276 419 aa5.61□□□□□ -1.51
CHL1-216ENST00000620033 C6orf229H3BNL8 230 aa5.61□□□□□ -1.51
CHL1-216ENST00000620033 TPM2P07951 284 aa5.61□□□□□ -1.51
CHL1-216ENST00000620033 HMMRO75330 724 aa5.61□□□□□ -1.51
CHL1-216ENST00000620033 IGHMBP2P38935 993 aaKnown RBP5.6□□□□□ -1.51
CHL1-216ENST00000620033 WASHC4Q2M389 1173 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 KRT28Q7Z3Y7 464 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 SLKQ9H2G2 1235 aaPredicted RBP5.6□□□□□ -1.51
CHL1-216ENST00000620033 ST20-MTHFSA0A0A6YYL1 179 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 NEBLO76041 1014 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 MTHFSP49914 203 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 ODF2Q5BJF6 829 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 PPP4R3AQ6IN85 833 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 TBC1D2BQ9UPU7 963 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 E9PSI1 815 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 OTUD7BQ6GQQ9 843 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 TMEM106CQ9BVX2 250 aa5.6□□□□□ -1.51
CHL1-216ENST00000620033 SLC4A8Q2Y0W8 1093 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 SPOUT1Q5T280 376 aaKnown RBP5.59□□□□□ -1.51
CHL1-216ENST00000620033 OGFOD1Q8N543 542 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 RAPGEF2Q9Y4G8 1499 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 NRDCO43847 1150 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 BMS1Q14692 1282 aaKnown RBP5.59□□□□□ -1.51
CHL1-216ENST00000620033 TTC16Q8NEE8 873 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 NEUROD6Q96NK8 337 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 FEZ1Q99689 392 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 PODXL2Q9NZ53 605 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 CCDC144AA2RUR9 1427 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 DDB1Q16531 1140 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 TTC39AQ5SRH9 613 aa5.59□□□□□ -1.51
CHL1-216ENST00000620033 CCDC47Q96A33 483 aaKnown RBP5.59□□□□□ -1.51
CHL1-216ENST00000620033 TRDNQ13061 729 aa5.59□□□□□ -1.52
CHL1-216ENST00000620033 TRIM29Q14134 588 aa5.59□□□□□ -1.52
CHL1-216ENST00000620033 ITPRIPQ8IWB1 547 aa5.59□□□□□ -1.52
CHL1-216ENST00000620033 NESP48681 1621 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 CGNL1Q0VF96 1302 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 A0A0U1RQG5 324 aaPredicted RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 PES1O00541 588 aaKnown RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 SSFA2P28290 1259 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 NOD1Q9Y239 953 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 EPRSP07814 1512 aaKnown RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 EIF4E1BA6NMX2 242 aaKnown RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 TPD52L1Q16890 204 aaPredicted RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 RAD54L2Q9Y4B4 1467 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 ATAD2BQ9ULI0 1458 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 UQCRHP07919 91 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 YY1P25490 414 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 PLCB2Q00722 1185 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 LRSAM1Q6UWE0 723 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 TSPYL2Q9H2G4 693 aaPredicted RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 RBM27Q9P2N5 1060 aaKnown RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 C11orf95C9JLR9 678 aaPredicted RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 G3BP1Q13283 466 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHL1-216ENST00000620033 HTATSF1O43719 755 aaKnown RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 BECN1Q14457 450 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 KCNH5Q8NCM2 988 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 GPBP1L1Q9HC44 474 aaPredicted RBP5.58□□□□□ -1.52
CHL1-216ENST00000620033 ZNF76P36508 570 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 TNIP1Q15025 636 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 TSPYL4Q9UJ04 414 aa5.58□□□□□ -1.52
CHL1-216ENST00000620033 SLF2Q8IX21 1173 aa5.57□□□□□ -1.52
CHL1-216ENST00000620033 TRPC5Q9UL62 973 aaPredicted RBP5.57□□□□□ -1.52
CHL1-216ENST00000620033 PLS1Q14651 629 aa5.57□□□□□ -1.52
CHL1-216ENST00000620033 CCDC136Q96JN2 1154 aa5.57□□□□□ -1.52
CHL1-216ENST00000620033 GIGYF1O75420 1035 aaPredicted RBP5.57□□□□□ -1.52
CHL1-216ENST00000620033 ATP6V1AP38606 617 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms