RNA–Protein interactions for RNA: ENST00000619924.1

LINC01140-211, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

Gene LINC01140, Length 1,034 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-211ENST00000619924 CERKQ8TCT0 537 aa31.73■■■□□ 2.67
LINC01140-211ENST00000619924 USP47Q96K76 1375 aa31.72■■■□□ 2.67
LINC01140-211ENST00000619924 FMN2Q9NZ56 1722 aa31.71■■■□□ 2.67
LINC01140-211ENST00000619924 MSH6P52701 1360 aa31.7■■■□□ 2.67
LINC01140-211ENST00000619924 CENPJQ9HC77 1338 aaPredicted RBP31.7■■■□□ 2.66
LINC01140-211ENST00000619924 POGKQ9P215 609 aa31.68■■■□□ 2.66
LINC01140-211ENST00000619924 SBNO2Q9Y2G9 1366 aa31.68■■■□□ 2.66
LINC01140-211ENST00000619924 ZEB1P37275 1124 aaPredicted RBP31.67■■■□□ 2.66
LINC01140-211ENST00000619924 TULP4Q9NRJ4 1543 aa31.65■■■□□ 2.66
LINC01140-211ENST00000619924 SAFB2Q14151 953 aaKnown RBP eCLIP31.64■■■□□ 2.66
LINC01140-211ENST00000619924 C19orf44Q9H6X5 657 aa31.64■■■□□ 2.66
LINC01140-211ENST00000619924 C14orf37Q86TY3 774 aa31.63■■■□□ 2.65
LINC01140-211ENST00000619924 USP32Q8NFA0 1604 aa31.6■■■□□ 2.65
LINC01140-211ENST00000619924 MST1RQ04912 1400 aa31.58■■■□□ 2.65
LINC01140-211ENST00000619924 MINK1Q8N4C8 1332 aaPredicted RBP31.58■■■□□ 2.65
LINC01140-211ENST00000619924 TOPAZ1Q8N9V7 1692 aa31.55■■■□□ 2.64
LINC01140-211ENST00000619924 ST20-MTHFSA0A0A6YYL1 179 aa31.55■■■□□ 2.64
LINC01140-211ENST00000619924 CADPS2Q86UW7 1296 aa31.55■■■□□ 2.64
LINC01140-211ENST00000619924 RGPD8O14715 1765 aaPredicted RBP31.55■■■□□ 2.64
LINC01140-211ENST00000619924 TESK2Q96S53 571 aa31.54■■■□□ 2.64
LINC01140-211ENST00000619924 HIRIP3Q9BW71 556 aaPredicted RBP31.54■■■□□ 2.64
LINC01140-211ENST00000619924 ITSN1Q15811 1721 aa31.54■■■□□ 2.64
LINC01140-211ENST00000619924 ANKARQ7Z5J8 1434 aa31.52■■■□□ 2.64
LINC01140-211ENST00000619924 ATF3P18847 181 aa31.52■■■□□ 2.64
LINC01140-211ENST00000619924 ATP7BP35670 1465 aa31.52■■■□□ 2.64
LINC01140-211ENST00000619924 EIF4G2P78344 907 aaKnown RBP eCLIP31.51■■■□□ 2.63
LINC01140-211ENST00000619924 C1orf167Q5SNV9 1468 aa31.51■■■□□ 2.63
LINC01140-211ENST00000619924 ROBO1Q9Y6N7 1651 aa31.49■■■□□ 2.63
LINC01140-211ENST00000619924 WASLO00401 505 aaPredicted RBP31.49■■■□□ 2.63
LINC01140-211ENST00000619924 HSPA5P11021 654 aaKnown RBP31.48■■■□□ 2.63
LINC01140-211ENST00000619924 KIF1AQ12756 1690 aa31.46■■■□□ 2.63
LINC01140-211ENST00000619924 TOM1O60784 492 aa31.45■■■□□ 2.63
LINC01140-211ENST00000619924 UBAP1LF5GYI3 381 aa31.44■■■□□ 2.62
LINC01140-211ENST00000619924 EVC2Q86UK5 1308 aa31.44■■■□□ 2.62
LINC01140-211ENST00000619924 CDK19Q9BWU1 502 aa31.42■■■□□ 2.62
LINC01140-211ENST00000619924 SLAIN2Q9P270 581 aa31.42■■■□□ 2.62
LINC01140-211ENST00000619924 PRR36Q9H6K5 1346 aa31.42■■■□□ 2.62
LINC01140-211ENST00000619924 NHSL1Q5SYE7 1610 aa31.42■■■□□ 2.62
LINC01140-211ENST00000619924 DISP3Q9P2K9 1392 aa31.42■■■□□ 2.62
LINC01140-211ENST00000619924 SLC24A1O60721 1099 aa31.4■■■□□ 2.62
LINC01140-211ENST00000619924 MYOM1P52179 1685 aa31.36■■■□□ 2.61
LINC01140-211ENST00000619924 AHDC1Q5TGY3 1603 aaPredicted RBP31.36■■■□□ 2.61
LINC01140-211ENST00000619924 ATAD2Q6PL18 1390 aa31.35■■■□□ 2.61
LINC01140-211ENST00000619924 NUTM2FA1L443 756 aa31.35■■■□□ 2.61
LINC01140-211ENST00000619924 SRPK2P78362 688 aaKnown RBP31.34■■■□□ 2.61
LINC01140-211ENST00000619924 TMF1P82094 1093 aa31.34■■■□□ 2.61
LINC01140-211ENST00000619924 ILDR1Q86SU0 546 aaPredicted RBP31.34■■■□□ 2.61
LINC01140-211ENST00000619924 CABP2Q9NPB3 220 aa31.34■■■□□ 2.61
LINC01140-211ENST00000619924 BRINP3Q76B58 766 aa31.33■■■□□ 2.61
LINC01140-211ENST00000619924 PUS7Q96PZ0 661 aaKnown RBP31.33■■■□□ 2.61
LINC01140-211ENST00000619924 NUDT16Q96DE0 195 aaKnown RBP31.32■■■□□ 2.6
LINC01140-211ENST00000619924 AKAP12Q02952 1782 aa31.3■■■□□ 2.6
LINC01140-211ENST00000619924 ORAI2Q96SN7 254 aa31.3■■■□□ 2.6
LINC01140-211ENST00000619924 PPIP5K1Q6PFW1 1433 aa31.3■■■□□ 2.6
LINC01140-211ENST00000619924 PIP4K2BP78356 416 aa31.28■■■□□ 2.6
LINC01140-211ENST00000619924 PHLPP1O60346 1717 aa31.27■■■□□ 2.6
LINC01140-211ENST00000619924 FBXO41Q8TF61 875 aa31.27■■■□□ 2.6
LINC01140-211ENST00000619924 CCDC61Q9Y6R9 512 aa31.27■■■□□ 2.6
LINC01140-211ENST00000619924 COL16A1Q07092 1604 aaPredicted RBP31.27■■■□□ 2.6
LINC01140-211ENST00000619924 ESCO1Q5FWF5 840 aa31.26■■■□□ 2.59
LINC01140-211ENST00000619924 MON2Q7Z3U7 1717 aa31.24■■■□□ 2.59
LINC01140-211ENST00000619924 CDCA8Q53HL2 280 aa31.24■■■□□ 2.59
LINC01140-211ENST00000619924 PHF8Q9UPP1 1060 aa31.24■■■□□ 2.59
LINC01140-211ENST00000619924 POLR3AO14802 1390 aaPredicted RBP31.24■■■□□ 2.59
LINC01140-211ENST00000619924 NINLQ9Y2I6 1382 aa31.24■■■□□ 2.59
LINC01140-211ENST00000619924 SCAF1Q9H7N4 1312 aaKnown RBP31.24■■■□□ 2.59
LINC01140-211ENST00000619924 PXDNQ92626 1479 aa31.23■■■□□ 2.59
LINC01140-211ENST00000619924 TRPM3Q9HCF6 1732 aaPredicted RBP31.23■■■□□ 2.59
LINC01140-211ENST00000619924 NRKQ7Z2Y5 1582 aa31.22■■■□□ 2.59
LINC01140-211ENST00000619924 CD163L1Q9NR16 1453 aa31.21■■■□□ 2.59
LINC01140-211ENST00000619924 PLEKHG3A1L390 1219 aa31.21■■■□□ 2.59
LINC01140-211ENST00000619924 C11orf95C9JLR9 678 aaPredicted RBP31.2■■■□□ 2.59
LINC01140-211ENST00000619924 NPHP3Q7Z494 1330 aa31.18■■■□□ 2.58
LINC01140-211ENST00000619924 PMFBP1Q8TBY8 1022 aa31.17■■■□□ 2.58
LINC01140-211ENST00000619924 KIF7Q2M1P5 1343 aa31.17■■■□□ 2.58
LINC01140-211ENST00000619924 CPSF1Q10570 1443 aaKnown RBP31.16■■■□□ 2.58
LINC01140-211ENST00000619924 CABP1Q9NZU7 370 aa31.16■■■□□ 2.58
LINC01140-211ENST00000619924 SOS2Q07890 1332 aaPredicted RBP31.14■■■□□ 2.58
LINC01140-211ENST00000619924 ALS2Q96Q42 1657 aa31.13■■■□□ 2.57
LINC01140-211ENST00000619924 DDX17Q92841 729 aaKnown RBP31.13■■■□□ 2.57
LINC01140-211ENST00000619924 ACEP12821 1306 aa31.13■■■□□ 2.57
LINC01140-211ENST00000619924 CCDC7Q96M83 1385 aa31.13■■■□□ 2.57
LINC01140-211ENST00000619924 FOXO3O43524 673 aa31.12■■■□□ 2.57
LINC01140-211ENST00000619924 USP6P35125 1406 aa31.11■■■□□ 2.57
LINC01140-211ENST00000619924 A0A1W2PP64 1363 aa31.1■■■□□ 2.57
LINC01140-211ENST00000619924 ANKRD36BQ8N2N9 1353 aa31.1■■■□□ 2.57
LINC01140-211ENST00000619924 WASHC2AQ641Q2 1341 aa31.1■■■□□ 2.57
LINC01140-211ENST00000619924 SHPRHQ149N8 1683 aa31.09■■■□□ 2.57
LINC01140-211ENST00000619924 NGDNQ8NEJ9 315 aaKnown RBP31.09■■■□□ 2.57
LINC01140-211ENST00000619924 SLC12A5Q9H2X9 1139 aa31.09■■■□□ 2.57
LINC01140-211ENST00000619924 SSH2Q76I76 1423 aa31.08■■■□□ 2.57
LINC01140-211ENST00000619924 TMC1Q8TDI8 760 aa31.08■■■□□ 2.57
LINC01140-211ENST00000619924 SBNO1A3KN83 1393 aa31.06■■■□□ 2.56
LINC01140-211ENST00000619924 HSPA1LP34931 641 aa31.06■■■□□ 2.56
LINC01140-211ENST00000619924 TNS3Q68CZ2 1445 aa31.06■■■□□ 2.56
LINC01140-211ENST00000619924 COL22A1Q8NFW1 1626 aaPredicted RBP31.06■■■□□ 2.56
LINC01140-211ENST00000619924 BRD4O60885 1362 aaPredicted RBP31.05■■■□□ 2.56
LINC01140-211ENST00000619924 PIK3C2AO00443 1686 aa31.04■■■□□ 2.56
LINC01140-211ENST00000619924 XPCQ01831 940 aaPredicted RBP31.03■■■□□ 2.56
LINC01140-211ENST00000619924 USP54Q70EL1 1684 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms