RNA–Protein interactions for RNA: ENST00000619839.4

NCAM1-226, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-226ENST00000619839 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
NCAM1-226ENST00000619839 GRPEL1Q9HAV7 217 aa13.67□□□□□ -0.22
NCAM1-226ENST00000619839 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
NCAM1-226ENST00000619839 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
NCAM1-226ENST00000619839 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
NCAM1-226ENST00000619839 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
NCAM1-226ENST00000619839 NEUROD2Q15784 382 aa13.66□□□□□ -0.22
NCAM1-226ENST00000619839 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
NCAM1-226ENST00000619839 SCAPERQ9BY12 1400 aa13.66□□□□□ -0.22
NCAM1-226ENST00000619839 ESPNB1AK53 854 aa13.65□□□□□ -0.22
NCAM1-226ENST00000619839 MFAP1P55081 439 aaKnown RBP13.65□□□□□ -0.22
NCAM1-226ENST00000619839 ERBB4Q15303 1308 aa13.65□□□□□ -0.22
NCAM1-226ENST00000619839 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
NCAM1-226ENST00000619839 RRP7AQ9Y3A4 280 aaKnown RBP13.65□□□□□ -0.22
NCAM1-226ENST00000619839 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
NCAM1-226ENST00000619839 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
NCAM1-226ENST00000619839 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
NCAM1-226ENST00000619839 ISY1Q9ULR0 285 aaKnown RBP13.63□□□□□ -0.23
NCAM1-226ENST00000619839 KDM5AP29375 1690 aaKnown RBP13.62□□□□□ -0.23
NCAM1-226ENST00000619839 HSCBQ8IWL3 235 aa13.62□□□□□ -0.23
NCAM1-226ENST00000619839 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
NCAM1-226ENST00000619839 RUNDC1Q96C34 613 aa13.61□□□□□ -0.23
NCAM1-226ENST00000619839 ARHGAP5Q13017 1502 aa13.61□□□□□ -0.23
NCAM1-226ENST00000619839 DUOX2Q9NRD8 1548 aa13.61□□□□□ -0.23
NCAM1-226ENST00000619839 MVPQ14764 893 aaKnown RBP13.61□□□□□ -0.23
NCAM1-226ENST00000619839 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
NCAM1-226ENST00000619839 DDIT3P35638 169 aa13.6□□□□□ -0.23
NCAM1-226ENST00000619839 WDR63Q8IWG1 891 aa13.6□□□□□ -0.23
NCAM1-226ENST00000619839 TRIM44Q96DX7 344 aaPredicted RBP13.59□□□□□ -0.23
NCAM1-226ENST00000619839 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
NCAM1-226ENST00000619839 CEP152O94986 1710 aa13.59□□□□□ -0.23
NCAM1-226ENST00000619839 GAS2L3Q86XJ1 694 aa13.59□□□□□ -0.23
NCAM1-226ENST00000619839 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
NCAM1-226ENST00000619839 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
NCAM1-226ENST00000619839 NCOA3Q9Y6Q9 1424 aa13.59□□□□□ -0.23
NCAM1-226ENST00000619839 STAC3Q96MF2 364 aa13.59□□□□□ -0.23
NCAM1-226ENST00000619839 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
NCAM1-226ENST00000619839 TNPO1Q92973 898 aaKnown RBP13.57□□□□□ -0.24
NCAM1-226ENST00000619839 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
NCAM1-226ENST00000619839 ZKSCAN2Q63HK3 967 aa13.56□□□□□ -0.24
NCAM1-226ENST00000619839 FTSJ3Q8IY81 847 aaKnown RBP13.56□□□□□ -0.24
NCAM1-226ENST00000619839 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
NCAM1-226ENST00000619839 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
NCAM1-226ENST00000619839 CHMP4AQ9BY43 222 aa13.56□□□□□ -0.24
NCAM1-226ENST00000619839 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
NCAM1-226ENST00000619839 TRPM2O94759 1503 aa13.55□□□□□ -0.24
NCAM1-226ENST00000619839 MORC1Q86VD1 984 aa13.55□□□□□ -0.24
NCAM1-226ENST00000619839 KANK1Q14678 1352 aa13.55□□□□□ -0.24
NCAM1-226ENST00000619839 HDAC1Q13547 482 aaPredicted RBP13.55□□□□□ -0.24
NCAM1-226ENST00000619839 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
NCAM1-226ENST00000619839 SNX21Q969T3 373 aa13.55□□□□□ -0.24
NCAM1-226ENST00000619839 TPM2P07951 284 aa13.54□□□□□ -0.24
NCAM1-226ENST00000619839 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
NCAM1-226ENST00000619839 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
NCAM1-226ENST00000619839 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
NCAM1-226ENST00000619839 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
NCAM1-226ENST00000619839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.54□□□□□ -0.24
NCAM1-226ENST00000619839 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
NCAM1-226ENST00000619839 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
NCAM1-226ENST00000619839 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
NCAM1-226ENST00000619839 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
NCAM1-226ENST00000619839 PTPRTO14522 1441 aa13.52□□□□□ -0.24
NCAM1-226ENST00000619839 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.25
NCAM1-226ENST00000619839 NSD3Q9BZ95 1437 aa13.52□□□□□ -0.25
NCAM1-226ENST00000619839 TRIM27P14373 513 aa13.51□□□□□ -0.25
NCAM1-226ENST00000619839 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
NCAM1-226ENST00000619839 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
NCAM1-226ENST00000619839 PDCL3Q9H2J4 239 aa13.5□□□□□ -0.25
NCAM1-226ENST00000619839 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
NCAM1-226ENST00000619839 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
NCAM1-226ENST00000619839 MTHFSP49914 203 aa13.5□□□□□ -0.25
NCAM1-226ENST00000619839 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
NCAM1-226ENST00000619839 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
NCAM1-226ENST00000619839 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
NCAM1-226ENST00000619839 TSR2Q969E8 191 aaKnown RBP13.5□□□□□ -0.25
NCAM1-226ENST00000619839 PTMSP20962 102 aa13.49□□□□□ -0.25
NCAM1-226ENST00000619839 CCDC173Q0VFZ6 552 aa13.49□□□□□ -0.25
NCAM1-226ENST00000619839 PPP1R9BQ96SB3 815 aa13.49□□□□□ -0.25
NCAM1-226ENST00000619839 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
NCAM1-226ENST00000619839 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
NCAM1-226ENST00000619839 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
NCAM1-226ENST00000619839 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
NCAM1-226ENST00000619839 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
NCAM1-226ENST00000619839 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
NCAM1-226ENST00000619839 KIF2CQ99661 725 aa13.48□□□□□ -0.25
NCAM1-226ENST00000619839 CD2BP2O95400 341 aaKnown RBP13.47□□□□□ -0.25
NCAM1-226ENST00000619839 CFAP53Q96M91 514 aa13.47□□□□□ -0.25
NCAM1-226ENST00000619839 SLC12A5Q9H2X9 1139 aa13.47□□□□□ -0.25
NCAM1-226ENST00000619839 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
NCAM1-226ENST00000619839 EXOSC9Q06265 439 aaKnown RBP13.47□□□□□ -0.25
NCAM1-226ENST00000619839 ATF7IPQ6VMQ6 1270 aa13.47□□□□□ -0.25
NCAM1-226ENST00000619839 ZSCAN30Q86W11 494 aa13.47□□□□□ -0.25
NCAM1-226ENST00000619839 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
NCAM1-226ENST00000619839 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
NCAM1-226ENST00000619839 NUCB1Q02818 461 aa13.47□□□□□ -0.25
NCAM1-226ENST00000619839 LNPKQ9C0E8 428 aa13.47□□□□□ -0.25
NCAM1-226ENST00000619839 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
NCAM1-226ENST00000619839 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
NCAM1-226ENST00000619839 ZBTB40Q9NUA8 1239 aa13.46□□□□□ -0.25
NCAM1-226ENST00000619839 ABCA6Q8N139 1617 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms