RNA–Protein interactions for RNA: ENST00000617633.4

DDX52-213, Transcript of DExD-box helicase 52, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX52, Length 6,362 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-213ENST00000617633 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
DDX52-213ENST00000617633 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
DDX52-213ENST00000617633 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
DDX52-213ENST00000617633 STARD3NLO95772 234 aa12.11□□□□□ -0.47
DDX52-213ENST00000617633 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
DDX52-213ENST00000617633 AK7Q96M32 723 aa12.11□□□□□ -0.47
DDX52-213ENST00000617633 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
DDX52-213ENST00000617633 NUTM2GQ5VZR2 741 aa12.1□□□□□ -0.47
DDX52-213ENST00000617633 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
DDX52-213ENST00000617633 ANP32EQ9BTT0 268 aa12.1□□□□□ -0.47
DDX52-213ENST00000617633 STK32BQ9NY57 414 aa12.1□□□□□ -0.47
DDX52-213ENST00000617633 CCDC136Q96JN2 1154 aa12.09□□□□□ -0.47
DDX52-213ENST00000617633 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
DDX52-213ENST00000617633 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
DDX52-213ENST00000617633 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
DDX52-213ENST00000617633 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
DDX52-213ENST00000617633 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
DDX52-213ENST00000617633 NCOA1Q15788 1441 aa12.08□□□□□ -0.48
DDX52-213ENST00000617633 NINLQ9Y2I6 1382 aa12.08□□□□□ -0.48
DDX52-213ENST00000617633 TARBP1Q13395 1621 aaKnown RBP12.08□□□□□ -0.48
DDX52-213ENST00000617633 TCEAL9Q9UHQ7 104 aa12.07□□□□□ -0.48
DDX52-213ENST00000617633 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
DDX52-213ENST00000617633 HSPA2P54652 639 aa12.07□□□□□ -0.48
DDX52-213ENST00000617633 AMOTQ4VCS5 1084 aa12.07□□□□□ -0.48
DDX52-213ENST00000617633 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
DDX52-213ENST00000617633 KCNA6P17658 529 aa12.07□□□□□ -0.48
DDX52-213ENST00000617633 NUDT16Q96DE0 195 aaKnown RBP12.07□□□□□ -0.48
DDX52-213ENST00000617633 TMEM132EQ6IEE7 984 aa12.06□□□□□ -0.48
DDX52-213ENST00000617633 USP47Q96K76 1375 aa12.06□□□□□ -0.48
DDX52-213ENST00000617633 TRAPPC8Q9Y2L5 1435 aa12.06□□□□□ -0.48
DDX52-213ENST00000617633 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
DDX52-213ENST00000617633 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
DDX52-213ENST00000617633 BECN1Q14457 450 aa12.05□□□□□ -0.48
DDX52-213ENST00000617633 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
DDX52-213ENST00000617633 CLSTN1O94985 981 aa12.05□□□□□ -0.48
DDX52-213ENST00000617633 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
DDX52-213ENST00000617633 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
DDX52-213ENST00000617633 PANK3Q9H999 370 aa12.04□□□□□ -0.48
DDX52-213ENST00000617633 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
DDX52-213ENST00000617633 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 GNAI1P63096 354 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 FBXO31Q5XUX0 539 aaPredicted RBP12.03□□□□□ -0.48
DDX52-213ENST00000617633 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
DDX52-213ENST00000617633 TMOD2Q9NZR1 351 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 TSPOAP1O95153 1857 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 MTHFSP49914 203 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 ARHGEF10O15013 1369 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 ST5P78524 1137 aa12.03□□□□□ -0.48
DDX52-213ENST00000617633 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.48
DDX52-213ENST00000617633 TRPM2O94759 1503 aa12.02□□□□□ -0.48
DDX52-213ENST00000617633 HSP90AB4PQ58FF6 505 aa12.02□□□□□ -0.48
DDX52-213ENST00000617633 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.48
DDX52-213ENST00000617633 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.48
DDX52-213ENST00000617633 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
DDX52-213ENST00000617633 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
DDX52-213ENST00000617633 EIF2S2P20042 333 aaKnown RBP12.01□□□□□ -0.49
DDX52-213ENST00000617633 RXRBP28702 533 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 CCDC34Q96HJ3 373 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
DDX52-213ENST00000617633 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 SLC4A10Q6U841 1118 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 RIMBP3CA6NJZ7 1639 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 RIMBP3BA6NNM3 1639 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 RIMBP3Q9UFD9 1639 aa12.01□□□□□ -0.49
DDX52-213ENST00000617633 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
DDX52-213ENST00000617633 YEATS2Q9ULM3 1422 aa12□□□□□ -0.49
DDX52-213ENST00000617633 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
DDX52-213ENST00000617633 NUP153P49790 1475 aaKnown RBP12□□□□□ -0.49
DDX52-213ENST00000617633 GOLGA6L22H0YM25 854 aa12□□□□□ -0.49
DDX52-213ENST00000617633 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
DDX52-213ENST00000617633 GPATCH8Q9UKJ3 1502 aaKnown RBP12□□□□□ -0.49
DDX52-213ENST00000617633 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
DDX52-213ENST00000617633 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
DDX52-213ENST00000617633 IDI1Q13907 227 aa11.99□□□□□ -0.49
DDX52-213ENST00000617633 CCDC30Q5VVM6 783 aa11.99□□□□□ -0.49
DDX52-213ENST00000617633 CCDC7Q96M83 1385 aa11.99□□□□□ -0.49
DDX52-213ENST00000617633 ABCA8O94911 1581 aa11.98□□□□□ -0.49
DDX52-213ENST00000617633 SLC3A2P08195 630 aaKnown RBP11.98□□□□□ -0.49
DDX52-213ENST00000617633 TRPC5Q9UL62 973 aaPredicted RBP11.98□□□□□ -0.49
DDX52-213ENST00000617633 CABP1Q9NZU7 370 aa11.98□□□□□ -0.49
DDX52-213ENST00000617633 RPGRQ92834 1020 aaKnown RBP11.98□□□□□ -0.49
DDX52-213ENST00000617633 XPCQ01831 940 aaPredicted RBP11.97□□□□□ -0.49
DDX52-213ENST00000617633 ITPRIPQ8IWB1 547 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 API5Q9BZZ5 524 aaKnown RBP11.97□□□□□ -0.49
DDX52-213ENST00000617633 USP21Q9UK80 565 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 NLRP1Q9C000 1473 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 MARCH6O60337 910 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 SYNE3Q6ZMZ3 975 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 RFC4P35249 363 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 DDB1Q16531 1140 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
DDX52-213ENST00000617633 MAGI3Q5TCQ9 1506 aa11.97□□□□□ -0.49
DDX52-213ENST00000617633 HTATSF1O43719 755 aaKnown RBP11.97□□□□□ -0.49
DDX52-213ENST00000617633 RWDD1Q9H446 243 aaPredicted RBP11.97□□□□□ -0.49
DDX52-213ENST00000617633 ABCC5O15440 1437 aa11.96□□□□□ -0.49
DDX52-213ENST00000617633 PARP3Q9Y6F1 533 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms