RNA–Protein interactions for RNA: ENST00000617178.4

POLDIP3-209, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene POLDIP3, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-209ENST00000617178 PIK3R4Q99570 1358 aa18.48■□□□□ 0.55
POLDIP3-209ENST00000617178 CHD2O14647 1828 aaKnown RBP18.47■□□□□ 0.55
POLDIP3-209ENST00000617178 FANCIQ9NVI1 1328 aa18.45■□□□□ 0.54
POLDIP3-209ENST00000617178 STRCP1A6NGW2 1772 aa18.45■□□□□ 0.54
POLDIP3-209ENST00000617178 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
POLDIP3-209ENST00000617178 ANP32CO43423 234 aa18.45■□□□□ 0.54
POLDIP3-209ENST00000617178 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
POLDIP3-209ENST00000617178 MINK1Q8N4C8 1332 aaPredicted RBP18.44■□□□□ 0.54
POLDIP3-209ENST00000617178 TESK2Q96S53 571 aa18.44■□□□□ 0.54
POLDIP3-209ENST00000617178 QRICH2Q9H0J4 1663 aa18.44■□□□□ 0.54
POLDIP3-209ENST00000617178 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
POLDIP3-209ENST00000617178 XRN1Q8IZH2 1706 aaKnown RBP18.43■□□□□ 0.54
POLDIP3-209ENST00000617178 TECPR2O15040 1411 aa18.43■□□□□ 0.54
POLDIP3-209ENST00000617178 KIF7Q2M1P5 1343 aa18.43■□□□□ 0.54
POLDIP3-209ENST00000617178 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
POLDIP3-209ENST00000617178 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
POLDIP3-209ENST00000617178 CPS1P31327 1500 aa18.41■□□□□ 0.54
POLDIP3-209ENST00000617178 KNDC1Q76NI1 1749 aa18.4■□□□□ 0.54
POLDIP3-209ENST00000617178 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
POLDIP3-209ENST00000617178 DLC1Q96QB1 1528 aa18.4■□□□□ 0.54
POLDIP3-209ENST00000617178 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
POLDIP3-209ENST00000617178 NWD1Q149M9 1564 aa18.4■□□□□ 0.54
POLDIP3-209ENST00000617178 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
POLDIP3-209ENST00000617178 FAM135BQ49AJ0 1406 aa18.39■□□□□ 0.53
POLDIP3-209ENST00000617178 POLR3GLQ9BT43 218 aa18.39■□□□□ 0.53
POLDIP3-209ENST00000617178 TMEM94Q12767 1356 aa18.38■□□□□ 0.53
POLDIP3-209ENST00000617178 ERICH6BQ5W0A0 696 aa18.37■□□□□ 0.53
POLDIP3-209ENST00000617178 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
POLDIP3-209ENST00000617178 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.36■□□□□ 0.53
POLDIP3-209ENST00000617178 MSH5O43196 834 aa18.35■□□□□ 0.53
POLDIP3-209ENST00000617178 NKTRP30414 1462 aaKnown RBP18.35■□□□□ 0.53
POLDIP3-209ENST00000617178 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
POLDIP3-209ENST00000617178 TMF1P82094 1093 aa18.33■□□□□ 0.53
POLDIP3-209ENST00000617178 CABP2Q9NPB3 220 aa18.33■□□□□ 0.53
POLDIP3-209ENST00000617178 CDK19Q9BWU1 502 aa18.33■□□□□ 0.52
POLDIP3-209ENST00000617178 MYOM1P52179 1685 aa18.33■□□□□ 0.52
POLDIP3-209ENST00000617178 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
POLDIP3-209ENST00000617178 WASLO00401 505 aaPredicted RBP18.31■□□□□ 0.52
POLDIP3-209ENST00000617178 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
POLDIP3-209ENST00000617178 LTBP4Q8N2S1 1624 aa18.31■□□□□ 0.52
POLDIP3-209ENST00000617178 EVC2Q86UK5 1308 aa18.3■□□□□ 0.52
POLDIP3-209ENST00000617178 NALCNQ8IZF0 1738 aa18.3■□□□□ 0.52
POLDIP3-209ENST00000617178 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
POLDIP3-209ENST00000617178 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
POLDIP3-209ENST00000617178 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
POLDIP3-209ENST00000617178 ADGRL3Q9HAR2 1447 aa18.28■□□□□ 0.52
POLDIP3-209ENST00000617178 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
POLDIP3-209ENST00000617178 MSH6P52701 1360 aa18.25■□□□□ 0.51
POLDIP3-209ENST00000617178 ATF3P18847 181 aa18.25■□□□□ 0.51
POLDIP3-209ENST00000617178 PRR36Q9H6K5 1346 aa18.24■□□□□ 0.51
POLDIP3-209ENST00000617178 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
POLDIP3-209ENST00000617178 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
POLDIP3-209ENST00000617178 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
POLDIP3-209ENST00000617178 ADGRB2O60241 1585 aa18.23■□□□□ 0.51
POLDIP3-209ENST00000617178 NCOA3Q9Y6Q9 1424 aa18.22■□□□□ 0.51
POLDIP3-209ENST00000617178 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
POLDIP3-209ENST00000617178 CDCA8Q53HL2 280 aa18.22■□□□□ 0.51
POLDIP3-209ENST00000617178 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
POLDIP3-209ENST00000617178 CADPS2Q86UW7 1296 aa18.2■□□□□ 0.5
POLDIP3-209ENST00000617178 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
POLDIP3-209ENST00000617178 ESCO1Q5FWF5 840 aa18.2■□□□□ 0.5
POLDIP3-209ENST00000617178 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
POLDIP3-209ENST00000617178 ORAI2Q96SN7 254 aa18.2■□□□□ 0.5
POLDIP3-209ENST00000617178 RGPD8O14715 1765 aaPredicted RBP18.19■□□□□ 0.5
POLDIP3-209ENST00000617178 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
POLDIP3-209ENST00000617178 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
POLDIP3-209ENST00000617178 ATP7BP35670 1465 aa18.18■□□□□ 0.5
POLDIP3-209ENST00000617178 CERKQ8TCT0 537 aa18.18■□□□□ 0.5
POLDIP3-209ENST00000617178 USP32Q8NFA0 1604 aa18.17■□□□□ 0.5
POLDIP3-209ENST00000617178 FMN2Q9NZ56 1722 aa18.17■□□□□ 0.5
POLDIP3-209ENST00000617178 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
POLDIP3-209ENST00000617178 SLAIN2Q9P270 581 aa18.16■□□□□ 0.5
POLDIP3-209ENST00000617178 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
POLDIP3-209ENST00000617178 MST1RQ04912 1400 aa18.16■□□□□ 0.5
POLDIP3-209ENST00000617178 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
POLDIP3-209ENST00000617178 DCCP43146 1447 aa18.15■□□□□ 0.5
POLDIP3-209ENST00000617178 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
POLDIP3-209ENST00000617178 PANK3Q9H999 370 aa18.15■□□□□ 0.5
POLDIP3-209ENST00000617178 C1orf167Q5SNV9 1468 aa18.15■□□□□ 0.5
POLDIP3-209ENST00000617178 PUS7Q96PZ0 661 aaKnown RBP18.14■□□□□ 0.49
POLDIP3-209ENST00000617178 DDX17Q92841 729 aaKnown RBP18.13■□□□□ 0.49
POLDIP3-209ENST00000617178 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
POLDIP3-209ENST00000617178 ACEP12821 1306 aa18.12■□□□□ 0.49
POLDIP3-209ENST00000617178 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
POLDIP3-209ENST00000617178 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
POLDIP3-209ENST00000617178 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
POLDIP3-209ENST00000617178 ANKARQ7Z5J8 1434 aa18.12■□□□□ 0.49
POLDIP3-209ENST00000617178 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
POLDIP3-209ENST00000617178 FOXO3O43524 673 aa18.11■□□□□ 0.49
POLDIP3-209ENST00000617178 XPCQ01831 940 aaPredicted RBP18.11■□□□□ 0.49
POLDIP3-209ENST00000617178 BRINP3Q76B58 766 aa18.1■□□□□ 0.49
POLDIP3-209ENST00000617178 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
POLDIP3-209ENST00000617178 CD163L1Q9NR16 1453 aa18.09■□□□□ 0.49
POLDIP3-209ENST00000617178 TOM1O60784 492 aa18.09■□□□□ 0.49
POLDIP3-209ENST00000617178 CARD14Q9BXL6 1004 aa18.09■□□□□ 0.49
POLDIP3-209ENST00000617178 A0A1W2PP64 1363 aa18.09■□□□□ 0.49
POLDIP3-209ENST00000617178 TOPAZ1Q8N9V7 1692 aa18.08■□□□□ 0.48
POLDIP3-209ENST00000617178 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
POLDIP3-209ENST00000617178 TERF2IPQ9NYB0 399 aa18.07■□□□□ 0.48
POLDIP3-209ENST00000617178 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms