RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 PLEKHG1Q9ULL1 1385 aa15.51■□□□□ 0.07
MMP28-206ENST00000616383 LTKP29376 864 aa15.51■□□□□ 0.07
MMP28-206ENST00000616383 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
MMP28-206ENST00000616383 EID1Q9Y6B2 187 aa15.51■□□□□ 0.07
MMP28-206ENST00000616383 DIP2AQ14689 1571 aa15.5■□□□□ 0.07
MMP28-206ENST00000616383 TXNDC2Q86VQ3 553 aa15.5■□□□□ 0.07
MMP28-206ENST00000616383 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
MMP28-206ENST00000616383 EIF4G2P78344 907 aaKnown RBP eCLIP15.48■□□□□ 0.07
MMP28-206ENST00000616383 ADAMTS13Q76LX8 1427 aa15.48■□□□□ 0.07
MMP28-206ENST00000616383 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
MMP28-206ENST00000616383 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
MMP28-206ENST00000616383 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
MMP28-206ENST00000616383 CERKQ8TCT0 537 aa15.47■□□□□ 0.07
MMP28-206ENST00000616383 QRICH2Q9H0J4 1663 aa15.47■□□□□ 0.07
MMP28-206ENST00000616383 MED14O60244 1454 aa15.46■□□□□ 0.07
MMP28-206ENST00000616383 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
MMP28-206ENST00000616383 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
MMP28-206ENST00000616383 ANKLE2Q86XL3 938 aa15.45■□□□□ 0.06
MMP28-206ENST00000616383 BCANQ96GW7 911 aa15.45■□□□□ 0.06
MMP28-206ENST00000616383 HIRIP3Q9BW71 556 aaPredicted RBP15.45■□□□□ 0.06
MMP28-206ENST00000616383 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
MMP28-206ENST00000616383 NPHP4O75161 1426 aaPredicted RBP15.43■□□□□ 0.06
MMP28-206ENST00000616383 YTHDC2Q9H6S0 1430 aaKnown RBP15.43■□□□□ 0.06
MMP28-206ENST00000616383 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
MMP28-206ENST00000616383 EIF3AQ14152 1382 aaKnown RBP15.43■□□□□ 0.06
MMP28-206ENST00000616383 XRN1Q8IZH2 1706 aaKnown RBP15.43■□□□□ 0.06
MMP28-206ENST00000616383 METP08581 1390 aa15.42■□□□□ 0.06
MMP28-206ENST00000616383 HSPA2P54652 639 aa15.42■□□□□ 0.06
MMP28-206ENST00000616383 CHD2O14647 1828 aaKnown RBP15.42■□□□□ 0.06
MMP28-206ENST00000616383 CPS1P31327 1500 aa15.42■□□□□ 0.06
MMP28-206ENST00000616383 DLC1Q96QB1 1528 aa15.42■□□□□ 0.06
MMP28-206ENST00000616383 LRPPRCP42704 1394 aaKnown RBP15.4■□□□□ 0.06
MMP28-206ENST00000616383 NCKAP5LQ9HCH0 1330 aa15.4■□□□□ 0.06
MMP28-206ENST00000616383 ST20-MTHFSA0A0A6YYL1 179 aa15.39■□□□□ 0.05
MMP28-206ENST00000616383 SLC26A8Q96RN1 970 aa15.39■□□□□ 0.05
MMP28-206ENST00000616383 STK26Q9P289 416 aa15.38■□□□□ 0.05
MMP28-206ENST00000616383 TRAK1Q9UPV9 953 aa15.38■□□□□ 0.05
MMP28-206ENST00000616383 TECPR2O15040 1411 aa15.37■□□□□ 0.05
MMP28-206ENST00000616383 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
MMP28-206ENST00000616383 TBX22Q9Y458 520 aa15.37■□□□□ 0.05
MMP28-206ENST00000616383 CENPJQ9HC77 1338 aaPredicted RBP15.36■□□□□ 0.05
MMP28-206ENST00000616383 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
MMP28-206ENST00000616383 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
MMP28-206ENST00000616383 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
MMP28-206ENST00000616383 SBNO2Q9Y2G9 1366 aa15.34■□□□□ 0.05
MMP28-206ENST00000616383 GABBR2O75899 941 aa15.33■□□□□ 0.04
MMP28-206ENST00000616383 TESK2Q96S53 571 aa15.33■□□□□ 0.04
MMP28-206ENST00000616383 PTCH1Q13635 1447 aa15.33■□□□□ 0.04
MMP28-206ENST00000616383 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.04
MMP28-206ENST00000616383 STRCP1A6NGW2 1772 aa15.32■□□□□ 0.04
MMP28-206ENST00000616383 CCDC7Q96M83 1385 aa15.32■□□□□ 0.04
MMP28-206ENST00000616383 TULP4Q9NRJ4 1543 aa15.32■□□□□ 0.04
MMP28-206ENST00000616383 C11orf95C9JLR9 678 aaPredicted RBP15.31■□□□□ 0.04
MMP28-206ENST00000616383 PRAM1Q96QH2 718 aa15.31■□□□□ 0.04
MMP28-206ENST00000616383 WASHC2AQ641Q2 1341 aa15.31■□□□□ 0.04
MMP28-206ENST00000616383 ROBO2Q9HCK4 1378 aa15.31■□□□□ 0.04
MMP28-206ENST00000616383 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
MMP28-206ENST00000616383 MYOM1P52179 1685 aa15.31■□□□□ 0.04
MMP28-206ENST00000616383 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
MMP28-206ENST00000616383 ADGRB2O60241 1585 aa15.3■□□□□ 0.04
MMP28-206ENST00000616383 KIF7Q2M1P5 1343 aa15.3■□□□□ 0.04
MMP28-206ENST00000616383 POGKQ9P215 609 aa15.3■□□□□ 0.04
MMP28-206ENST00000616383 NALCNQ8IZF0 1738 aa15.29■□□□□ 0.04
MMP28-206ENST00000616383 SAFB2Q14151 953 aaKnown RBP eCLIP15.29■□□□□ 0.04
MMP28-206ENST00000616383 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
MMP28-206ENST00000616383 TMF1P82094 1093 aa15.28■□□□□ 0.04
MMP28-206ENST00000616383 SIRT1Q96EB6 747 aa15.28■□□□□ 0.04
MMP28-206ENST00000616383 WAPLQ7Z5K2 1190 aa15.27■□□□□ 0.04
MMP28-206ENST00000616383 NKTRP30414 1462 aaKnown RBP15.27■□□□□ 0.03
MMP28-206ENST00000616383 MINK1Q8N4C8 1332 aaPredicted RBP15.26■□□□□ 0.03
MMP28-206ENST00000616383 KCNA6P17658 529 aa15.25■□□□□ 0.03
MMP28-206ENST00000616383 POLR3GLQ9BT43 218 aa15.25■□□□□ 0.03
MMP28-206ENST00000616383 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
MMP28-206ENST00000616383 XIRP1Q702N8 1843 aaKnown RBP15.23■□□□□ 0.03
MMP28-206ENST00000616383 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
MMP28-206ENST00000616383 EVC2Q86UK5 1308 aa15.22■□□□□ 0.03
MMP28-206ENST00000616383 CDCA8Q53HL2 280 aa15.22■□□□□ 0.03
MMP28-206ENST00000616383 ITSN1Q15811 1721 aa15.21■□□□□ 0.03
MMP28-206ENST00000616383 CDC42BPGQ6DT37 1551 aa15.21■□□□□ 0.03
MMP28-206ENST00000616383 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.03
MMP28-206ENST00000616383 TOPAZ1Q8N9V7 1692 aa15.21■□□□□ 0.03
MMP28-206ENST00000616383 CD44P16070 742 aaKnown RBP15.2■□□□□ 0.02
MMP28-206ENST00000616383 RGPD8O14715 1765 aaPredicted RBP15.2■□□□□ 0.02
MMP28-206ENST00000616383 ADGRL3Q9HAR2 1447 aa15.19■□□□□ 0.02
MMP28-206ENST00000616383 USP32Q8NFA0 1604 aa15.19■□□□□ 0.02
MMP28-206ENST00000616383 DIEXFQ68CQ4 756 aaKnown RBP15.18■□□□□ 0.02
MMP28-206ENST00000616383 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
MMP28-206ENST00000616383 ATP7BP35670 1465 aa15.16■□□□□ 0.02
MMP28-206ENST00000616383 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
MMP28-206ENST00000616383 SRPK2P78362 688 aaKnown RBP15.16■□□□□ 0.02
MMP28-206ENST00000616383 CDK19Q9BWU1 502 aa15.16■□□□□ 0.02
MMP28-206ENST00000616383 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
MMP28-206ENST00000616383 ZNF335Q9H4Z2 1342 aaPredicted RBP15.16■□□□□ 0.02
MMP28-206ENST00000616383 ATAD2Q6PL18 1390 aa15.15■□□□□ 0.02
MMP28-206ENST00000616383 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
MMP28-206ENST00000616383 PUS7Q96PZ0 661 aaKnown RBP15.15■□□□□ 0.02
MMP28-206ENST00000616383 AKAP12Q02952 1782 aa15.15■□□□□ 0.02
MMP28-206ENST00000616383 LHX8Q68G74 356 aa15.14■□□□□ 0.01
MMP28-206ENST00000616383 RBM33Q96EV2 1170 aaKnown RBP15.14■□□□□ 0.01
MMP28-206ENST00000616383 TMEM94Q12767 1356 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms