RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
NLRC3-204ENST00000615877 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
NLRC3-204ENST00000615877 EVC2Q86UK5 1308 aa16.12■□□□□ 0.17
NLRC3-204ENST00000615877 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
NLRC3-204ENST00000615877 TMEM132AQ24JP5 1023 aa16.11■□□□□ 0.17
NLRC3-204ENST00000615877 LNPKQ9C0E8 428 aa16.11■□□□□ 0.17
NLRC3-204ENST00000615877 WIZO95785 1651 aa16.11■□□□□ 0.17
NLRC3-204ENST00000615877 TRDNQ13061 729 aa16.11■□□□□ 0.17
NLRC3-204ENST00000615877 RIPK4P57078 832 aa16.11■□□□□ 0.17
NLRC3-204ENST00000615877 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
NLRC3-204ENST00000615877 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
NLRC3-204ENST00000615877 RUNDC1Q96C34 613 aa16.1■□□□□ 0.17
NLRC3-204ENST00000615877 LRRFIP1Q32MZ4 808 aaKnown RBP16.1■□□□□ 0.17
NLRC3-204ENST00000615877 SMARCA2P51531 1590 aa16.1■□□□□ 0.17
NLRC3-204ENST00000615877 AAMPQ13685 434 aa16.1■□□□□ 0.17
NLRC3-204ENST00000615877 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
NLRC3-204ENST00000615877 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 KIF7Q2M1P5 1343 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 ZFYVE27Q5T4F4 411 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 PANK1Q8TE04 598 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 ACBD3Q9H3P7 528 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 HMOX1P09601 288 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 FKBP5Q13451 457 aaPredicted RBP16.09■□□□□ 0.17
NLRC3-204ENST00000615877 RIC3Q7Z5B4 369 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 DIAPH1O60610 1272 aaKnown RBP16.09■□□□□ 0.17
NLRC3-204ENST00000615877 CDC45O75419 566 aa16.09■□□□□ 0.17
NLRC3-204ENST00000615877 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
NLRC3-204ENST00000615877 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.17
NLRC3-204ENST00000615877 IL27Q8NEV9 243 aa16.08■□□□□ 0.17
NLRC3-204ENST00000615877 AK7Q96M32 723 aa16.08■□□□□ 0.17
NLRC3-204ENST00000615877 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
NLRC3-204ENST00000615877 CCDC73Q6ZRK6 1079 aa16.08■□□□□ 0.16
NLRC3-204ENST00000615877 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.16
NLRC3-204ENST00000615877 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
NLRC3-204ENST00000615877 NUTM2BA6NNL0 878 aaPredicted RBP16.07■□□□□ 0.16
NLRC3-204ENST00000615877 NUTM2EB1AL46 878 aaPredicted RBP16.07■□□□□ 0.16
NLRC3-204ENST00000615877 ODF2Q5BJF6 829 aa16.07■□□□□ 0.16
NLRC3-204ENST00000615877 NUTM2AQ8IVF1 878 aaPredicted RBP16.07■□□□□ 0.16
NLRC3-204ENST00000615877 RNF214Q8ND24 703 aa16.07■□□□□ 0.16
NLRC3-204ENST00000615877 RUFY1Q96T51 708 aa16.07■□□□□ 0.16
NLRC3-204ENST00000615877 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
NLRC3-204ENST00000615877 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
NLRC3-204ENST00000615877 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
NLRC3-204ENST00000615877 CCDC173Q0VFZ6 552 aa16.06■□□□□ 0.16
NLRC3-204ENST00000615877 RAPGEF4Q8WZA2 1011 aa16.05■□□□□ 0.16
NLRC3-204ENST00000615877 HSP90B2PQ58FF3 399 aa16.05■□□□□ 0.16
NLRC3-204ENST00000615877 STRN4Q9NRL3 753 aa16.05■□□□□ 0.16
NLRC3-204ENST00000615877 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
NLRC3-204ENST00000615877 LETM1O95202 739 aaPredicted RBP16.04■□□□□ 0.16
NLRC3-204ENST00000615877 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
NLRC3-204ENST00000615877 PAF1Q8N7H5 531 aa16.04■□□□□ 0.16
NLRC3-204ENST00000615877 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
NLRC3-204ENST00000615877 PKNOX2Q96KN3 472 aa16.03■□□□□ 0.16
NLRC3-204ENST00000615877 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
NLRC3-204ENST00000615877 EPS15P42566 896 aa16.03■□□□□ 0.16
NLRC3-204ENST00000615877 FAM69CQ0P6D2 419 aa16.03■□□□□ 0.16
NLRC3-204ENST00000615877 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
NLRC3-204ENST00000615877 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.03■□□□□ 0.16
NLRC3-204ENST00000615877 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
NLRC3-204ENST00000615877 BRD4O60885 1362 aaPredicted RBP16.03■□□□□ 0.16
NLRC3-204ENST00000615877 RBM10P98175 930 aaKnown RBP16.02■□□□□ 0.16
NLRC3-204ENST00000615877 CWC15Q9P013 229 aaKnown RBP16.02■□□□□ 0.16
NLRC3-204ENST00000615877 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.02■□□□□ 0.16
NLRC3-204ENST00000615877 ERC2O15083 957 aa16.02■□□□□ 0.15
NLRC3-204ENST00000615877 IBSPP21815 317 aaPredicted RBP16.02■□□□□ 0.15
NLRC3-204ENST00000615877 CCDC66A2RUB6 948 aa16.01■□□□□ 0.15
NLRC3-204ENST00000615877 CDR1P51861 262 aa16.01■□□□□ 0.15
NLRC3-204ENST00000615877 SKIDA1Q1XH10 827 aa16.01■□□□□ 0.15
NLRC3-204ENST00000615877 MBD3O95983 291 aa16.01■□□□□ 0.15
NLRC3-204ENST00000615877 GNAI1P63096 354 aa16.01■□□□□ 0.15
NLRC3-204ENST00000615877 ATP2B2Q01814 1243 aa16.01■□□□□ 0.15
NLRC3-204ENST00000615877 SF3B2Q13435 895 aaKnown RBP16.01■□□□□ 0.15
NLRC3-204ENST00000615877 HSP90AB2PQ58FF8 381 aa16.01■□□□□ 0.15
NLRC3-204ENST00000615877 OLFM4Q6UX06 510 aa16■□□□□ 0.15
NLRC3-204ENST00000615877 CALRP27797 417 aaKnown RBP16■□□□□ 0.15
NLRC3-204ENST00000615877 PRPF40AO75400 957 aaKnown RBP16■□□□□ 0.15
NLRC3-204ENST00000615877 HSP90AB4PQ58FF6 505 aa16■□□□□ 0.15
NLRC3-204ENST00000615877 PDILTQ8N807 584 aa16■□□□□ 0.15
NLRC3-204ENST00000615877 TTLL5Q6EMB2 1281 aa15.99■□□□□ 0.15
NLRC3-204ENST00000615877 TRIM5Q9C035 493 aa15.99■□□□□ 0.15
NLRC3-204ENST00000615877 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
NLRC3-204ENST00000615877 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
NLRC3-204ENST00000615877 HMGN5P82970 282 aaKnown RBP15.98■□□□□ 0.15
NLRC3-204ENST00000615877 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
NLRC3-204ENST00000615877 NINLQ9Y2I6 1382 aa15.98■□□□□ 0.15
NLRC3-204ENST00000615877 RRP12Q5JTH9 1297 aaKnown RBP15.97■□□□□ 0.15
NLRC3-204ENST00000615877 DNAJC2Q99543 621 aaKnown RBP15.97■□□□□ 0.15
NLRC3-204ENST00000615877 SAFBQ15424 915 aaKnown RBP eCLIP15.97■□□□□ 0.15
NLRC3-204ENST00000615877 WWC2Q6AWC2 1192 aa15.97■□□□□ 0.15
NLRC3-204ENST00000615877 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
NLRC3-204ENST00000615877 RALYLQ86SE5 291 aaKnown RBP15.97■□□□□ 0.15
NLRC3-204ENST00000615877 ADAMTS8Q9UP79 889 aa15.97■□□□□ 0.15
NLRC3-204ENST00000615877 ERCC4Q92889 916 aaPredicted RBP15.97■□□□□ 0.15
NLRC3-204ENST00000615877 ESCO1Q5FWF5 840 aa15.96■□□□□ 0.15
NLRC3-204ENST00000615877 CABP2Q9NPB3 220 aa15.96■□□□□ 0.15
NLRC3-204ENST00000615877 PSMA5P28066 241 aa15.96■□□□□ 0.14
NLRC3-204ENST00000615877 ATP2B1P20020 1258 aa15.95■□□□□ 0.14
NLRC3-204ENST00000615877 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
NLRC3-204ENST00000615877 SDF4Q9BRK5 362 aa15.95■□□□□ 0.14
NLRC3-204ENST00000615877 MIA2Q96PC5 1412 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms