RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MYOM1P52179 1685 aa11.91□□□□□ -0.5
VPS11-206ENST00000614944 ADGRB2O60241 1585 aa11.9□□□□□ -0.5
VPS11-206ENST00000614944 FAM135BQ49AJ0 1406 aa11.9□□□□□ -0.5
VPS11-206ENST00000614944 LRPPRCP42704 1394 aaKnown RBP11.9□□□□□ -0.51
VPS11-206ENST00000614944 PIK3R4Q99570 1358 aa11.9□□□□□ -0.51
VPS11-206ENST00000614944 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
VPS11-206ENST00000614944 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
VPS11-206ENST00000614944 ABCC11Q96J66 1382 aa11.89□□□□□ -0.51
VPS11-206ENST00000614944 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
VPS11-206ENST00000614944 YTHDC2Q9H6S0 1430 aaKnown RBP11.88□□□□□ -0.51
VPS11-206ENST00000614944 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
VPS11-206ENST00000614944 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
VPS11-206ENST00000614944 CDCA8Q53HL2 280 aa11.88□□□□□ -0.51
VPS11-206ENST00000614944 CFAP70Q5T0N1 1121 aa11.88□□□□□ -0.51
VPS11-206ENST00000614944 USP32Q8NFA0 1604 aa11.87□□□□□ -0.51
VPS11-206ENST00000614944 ST20-MTHFSA0A0A6YYL1 179 aa11.87□□□□□ -0.51
VPS11-206ENST00000614944 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
VPS11-206ENST00000614944 KTN1Q86UP2 1357 aaKnown RBP11.86□□□□□ -0.51
VPS11-206ENST00000614944 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
VPS11-206ENST00000614944 TMF1P82094 1093 aa11.85□□□□□ -0.51
VPS11-206ENST00000614944 PTCH1Q13635 1447 aa11.85□□□□□ -0.51
VPS11-206ENST00000614944 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
VPS11-206ENST00000614944 NWD1Q149M9 1564 aa11.85□□□□□ -0.51
VPS11-206ENST00000614944 C11orf95C9JLR9 678 aaPredicted RBP11.84□□□□□ -0.51
VPS11-206ENST00000614944 CHD2O14647 1828 aaKnown RBP11.84□□□□□ -0.51
VPS11-206ENST00000614944 BCANQ96GW7 911 aa11.84□□□□□ -0.51
VPS11-206ENST00000614944 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
VPS11-206ENST00000614944 NBR1Q14596 966 aa11.83□□□□□ -0.52
VPS11-206ENST00000614944 TULP4Q9NRJ4 1543 aa11.83□□□□□ -0.52
VPS11-206ENST00000614944 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
VPS11-206ENST00000614944 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
VPS11-206ENST00000614944 DISP3Q9P2K9 1392 aa11.83□□□□□ -0.52
VPS11-206ENST00000614944 EID1Q9Y6B2 187 aa11.82□□□□□ -0.52
VPS11-206ENST00000614944 CEBPAP49715 358 aaPredicted RBP11.82□□□□□ -0.52
VPS11-206ENST00000614944 DHX37Q8IY37 1157 aaKnown RBP11.82□□□□□ -0.52
VPS11-206ENST00000614944 NPC1L1Q9UHC9 1359 aa11.82□□□□□ -0.52
VPS11-206ENST00000614944 BRD2P25440 801 aaKnown RBP11.82□□□□□ -0.52
VPS11-206ENST00000614944 RTL5Q5HYW3 569 aaPredicted RBP11.82□□□□□ -0.52
VPS11-206ENST00000614944 CHMP4AQ9BY43 222 aa11.82□□□□□ -0.52
VPS11-206ENST00000614944 CCER2I3L3R5 266 aa11.8□□□□□ -0.52
VPS11-206ENST00000614944 TOPAZ1Q8N9V7 1692 aa11.8□□□□□ -0.52
VPS11-206ENST00000614944 METP08581 1390 aa11.78□□□□□ -0.52
VPS11-206ENST00000614944 LTKP29376 864 aa11.78□□□□□ -0.52
VPS11-206ENST00000614944 DDX10Q13206 875 aaKnown RBP11.78□□□□□ -0.52
VPS11-206ENST00000614944 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
VPS11-206ENST00000614944 NAP1L5Q96NT1 182 aaPredicted RBP11.76□□□□□ -0.53
VPS11-206ENST00000614944 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
VPS11-206ENST00000614944 ITSN1Q15811 1721 aa11.76□□□□□ -0.53
VPS11-206ENST00000614944 NPHP4O75161 1426 aaPredicted RBP11.76□□□□□ -0.53
VPS11-206ENST00000614944 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
VPS11-206ENST00000614944 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
VPS11-206ENST00000614944 ATAD2Q6PL18 1390 aa11.76□□□□□ -0.53
VPS11-206ENST00000614944 PTPRUQ92729 1446 aa11.76□□□□□ -0.53
VPS11-206ENST00000614944 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
VPS11-206ENST00000614944 ANKLE2Q86XL3 938 aa11.75□□□□□ -0.53
VPS11-206ENST00000614944 NKTRP30414 1462 aaKnown RBP11.75□□□□□ -0.53
VPS11-206ENST00000614944 ATP7BP35670 1465 aa11.75□□□□□ -0.53
VPS11-206ENST00000614944 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
VPS11-206ENST00000614944 CDC42BPGQ6DT37 1551 aa11.74□□□□□ -0.53
VPS11-206ENST00000614944 NCOA3Q9Y6Q9 1424 aa11.74□□□□□ -0.53
VPS11-206ENST00000614944 LMTK3Q96Q04 1460 aa11.74□□□□□ -0.53
VPS11-206ENST00000614944 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
VPS11-206ENST00000614944 ANP32CO43423 234 aa11.73□□□□□ -0.53
VPS11-206ENST00000614944 TMEM132EQ6IEE7 984 aa11.73□□□□□ -0.53
VPS11-206ENST00000614944 MON2Q7Z3U7 1717 aa11.73□□□□□ -0.53
VPS11-206ENST00000614944 FMN2Q9NZ56 1722 aa11.73□□□□□ -0.53
VPS11-206ENST00000614944 FKBP8Q14318 412 aa11.73□□□□□ -0.53
VPS11-206ENST00000614944 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
VPS11-206ENST00000614944 TRAK1Q9UPV9 953 aa11.73□□□□□ -0.53
VPS11-206ENST00000614944 PARD3Q8TEW0 1356 aa11.72□□□□□ -0.53
VPS11-206ENST00000614944 KDM4FA0A1W2PPD8 638 aa11.71□□□□□ -0.53
VPS11-206ENST00000614944 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.53
VPS11-206ENST00000614944 STRCQ7RTU9 1775 aa11.71□□□□□ -0.53
VPS11-206ENST00000614944 NSD2O96028 1365 aa11.71□□□□□ -0.53
VPS11-206ENST00000614944 INSRP06213 1382 aa11.71□□□□□ -0.53
VPS11-206ENST00000614944 USP54Q70EL1 1684 aa11.71□□□□□ -0.53
VPS11-206ENST00000614944 ANKARQ7Z5J8 1434 aa11.71□□□□□ -0.53
VPS11-206ENST00000614944 RALBP1Q15311 655 aa11.71□□□□□ -0.54
VPS11-206ENST00000614944 NUTM2DQ5VT03 806 aaPredicted RBP11.71□□□□□ -0.54
VPS11-206ENST00000614944 ANKRD36BQ8N2N9 1353 aa11.71□□□□□ -0.54
VPS11-206ENST00000614944 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
VPS11-206ENST00000614944 ROBO2Q9HCK4 1378 aa11.7□□□□□ -0.54
VPS11-206ENST00000614944 NRKQ7Z2Y5 1582 aa11.7□□□□□ -0.54
VPS11-206ENST00000614944 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
VPS11-206ENST00000614944 NOP58Q9Y2X3 529 aaKnown RBP11.7□□□□□ -0.54
VPS11-206ENST00000614944 KIF20BQ96Q89 1820 aa11.69□□□□□ -0.54
VPS11-206ENST00000614944 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
VPS11-206ENST00000614944 PRAM1Q96QH2 718 aa11.69□□□□□ -0.54
VPS11-206ENST00000614944 CD163L1Q9NR16 1453 aa11.69□□□□□ -0.54
VPS11-206ENST00000614944 LRRC7Q96NW7 1537 aa11.68□□□□□ -0.54
VPS11-206ENST00000614944 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
VPS11-206ENST00000614944 PLEKHH1Q9ULM0 1364 aa11.67□□□□□ -0.54
VPS11-206ENST00000614944 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
VPS11-206ENST00000614944 HSP90AA2PQ14568 343 aaPredicted RBP11.67□□□□□ -0.54
VPS11-206ENST00000614944 POGKQ9P215 609 aa11.67□□□□□ -0.54
VPS11-206ENST00000614944 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
VPS11-206ENST00000614944 DCCP43146 1447 aa11.65□□□□□ -0.54
VPS11-206ENST00000614944 WASLO00401 505 aaPredicted RBP11.65□□□□□ -0.54
VPS11-206ENST00000614944 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
VPS11-206ENST00000614944 PANK3Q9H999 370 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms