RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
SNPH-203ENST00000614659 PDE3AQ14432 1141 aa18.1■□□□□ 0.49
SNPH-203ENST00000614659 ABCC5O15440 1437 aa18.1■□□□□ 0.49
SNPH-203ENST00000614659 TPM4P67936 248 aa18.09■□□□□ 0.49
SNPH-203ENST00000614659 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
SNPH-203ENST00000614659 BCL2L13Q9BXK5 485 aa18.09■□□□□ 0.49
SNPH-203ENST00000614659 GNL2Q13823 731 aaKnown RBP18.09■□□□□ 0.49
SNPH-203ENST00000614659 ATP6V1DQ9Y5K8 247 aa18.09■□□□□ 0.49
SNPH-203ENST00000614659 CHMP5Q9NZZ3 219 aa18.09■□□□□ 0.49
SNPH-203ENST00000614659 ABTB2Q8N961 1025 aa18.07■□□□□ 0.48
SNPH-203ENST00000614659 AMER1Q5JTC6 1135 aaPredicted RBP18.07■□□□□ 0.48
SNPH-203ENST00000614659 NOL10Q9BSC4 688 aaKnown RBP18.06■□□□□ 0.48
SNPH-203ENST00000614659 CCDC34Q96HJ3 373 aa18.06■□□□□ 0.48
SNPH-203ENST00000614659 WWC1Q8IX03 1113 aa18.04■□□□□ 0.48
SNPH-203ENST00000614659 RUFY2Q8WXA3 655 aa18.04■□□□□ 0.48
SNPH-203ENST00000614659 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
SNPH-203ENST00000614659 PLEKHO1Q53GL0 409 aaPredicted RBP18.04■□□□□ 0.48
SNPH-203ENST00000614659 AMOTL1Q8IY63 956 aa18.04■□□□□ 0.48
SNPH-203ENST00000614659 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
SNPH-203ENST00000614659 WDR63Q8IWG1 891 aa18.03■□□□□ 0.48
SNPH-203ENST00000614659 NCOA1Q15788 1441 aa18.03■□□□□ 0.48
SNPH-203ENST00000614659 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
SNPH-203ENST00000614659 ARHGEF11O15085 1522 aa18.02■□□□□ 0.48
SNPH-203ENST00000614659 HSP90AA2PQ14568 343 aaPredicted RBP18.02■□□□□ 0.48
SNPH-203ENST00000614659 INTS3Q68E01 1043 aaKnown RBP18.02■□□□□ 0.48
SNPH-203ENST00000614659 PRAM1Q96QH2 718 aa18.02■□□□□ 0.48
SNPH-203ENST00000614659 NBPF1Q3BBV0 1214 aa18.02■□□□□ 0.48
SNPH-203ENST00000614659 ARID3AQ99856 593 aa18.02■□□□□ 0.48
SNPH-203ENST00000614659 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.47
SNPH-203ENST00000614659 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
SNPH-203ENST00000614659 ANO8Q9HCE9 1232 aaPredicted RBP18.01■□□□□ 0.47
SNPH-203ENST00000614659 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
SNPH-203ENST00000614659 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
SNPH-203ENST00000614659 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
SNPH-203ENST00000614659 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
SNPH-203ENST00000614659 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
SNPH-203ENST00000614659 ATAD2Q6PL18 1390 aa18■□□□□ 0.47
SNPH-203ENST00000614659 MTHFSP49914 203 aa17.99■□□□□ 0.47
SNPH-203ENST00000614659 FANCAO15360 1455 aa17.99■□□□□ 0.47
SNPH-203ENST00000614659 NUCB2P80303 420 aa17.99■□□□□ 0.47
SNPH-203ENST00000614659 DDX49Q9Y6V7 483 aaKnown RBP17.99■□□□□ 0.47
SNPH-203ENST00000614659 TULP1O00294 542 aaPredicted RBP17.98■□□□□ 0.47
SNPH-203ENST00000614659 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
SNPH-203ENST00000614659 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
SNPH-203ENST00000614659 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
SNPH-203ENST00000614659 C9orf78Q9NZ63 289 aaPredicted RBP17.98■□□□□ 0.47
SNPH-203ENST00000614659 UGGT2Q9NYU1 1516 aa17.98■□□□□ 0.47
SNPH-203ENST00000614659 TNNT3P45378 269 aaPredicted RBP17.97■□□□□ 0.47
SNPH-203ENST00000614659 CDC45O75419 566 aa17.97■□□□□ 0.47
SNPH-203ENST00000614659 RILPL2Q969X0 211 aa17.97■□□□□ 0.47
SNPH-203ENST00000614659 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
SNPH-203ENST00000614659 LRPPRCP42704 1394 aaKnown RBP17.96■□□□□ 0.47
SNPH-203ENST00000614659 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
SNPH-203ENST00000614659 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
SNPH-203ENST00000614659 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
SNPH-203ENST00000614659 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
SNPH-203ENST00000614659 CDCA7LQ96GN5 454 aa17.96■□□□□ 0.47
SNPH-203ENST00000614659 DIAPH3Q9NSV4 1193 aa17.96■□□□□ 0.47
SNPH-203ENST00000614659 CTTNBP2Q8WZ74 1663 aa17.95■□□□□ 0.46
SNPH-203ENST00000614659 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
SNPH-203ENST00000614659 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
SNPH-203ENST00000614659 CDK19Q9BWU1 502 aa17.95■□□□□ 0.46
SNPH-203ENST00000614659 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
SNPH-203ENST00000614659 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
SNPH-203ENST00000614659 TSPYL4Q9UJ04 414 aa17.94■□□□□ 0.46
SNPH-203ENST00000614659 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
SNPH-203ENST00000614659 KCNH5Q8NCM2 988 aa17.94■□□□□ 0.46
SNPH-203ENST00000614659 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
SNPH-203ENST00000614659 ZNF428Q96B54 188 aa17.93■□□□□ 0.46
SNPH-203ENST00000614659 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
SNPH-203ENST00000614659 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
SNPH-203ENST00000614659 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
SNPH-203ENST00000614659 VPS37DQ86XT2 251 aa17.92■□□□□ 0.46
SNPH-203ENST00000614659 SLC26A8Q96RN1 970 aa17.92■□□□□ 0.46
SNPH-203ENST00000614659 BACH2Q9BYV9 841 aa17.92■□□□□ 0.46
SNPH-203ENST00000614659 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
SNPH-203ENST00000614659 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
SNPH-203ENST00000614659 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
SNPH-203ENST00000614659 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
SNPH-203ENST00000614659 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
SNPH-203ENST00000614659 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
SNPH-203ENST00000614659 TCOF1Q13428 1488 aaKnown RBP17.91■□□□□ 0.46
SNPH-203ENST00000614659 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
SNPH-203ENST00000614659 FAM135AQ9P2D6 1515 aa17.9■□□□□ 0.46
SNPH-203ENST00000614659 ERC2O15083 957 aa17.9■□□□□ 0.46
SNPH-203ENST00000614659 RNF20Q5VTR2 975 aa17.9■□□□□ 0.46
SNPH-203ENST00000614659 NFKBIBQ15653 356 aa17.9■□□□□ 0.46
SNPH-203ENST00000614659 KIF6Q6ZMV9 814 aa17.9■□□□□ 0.46
SNPH-203ENST00000614659 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
SNPH-203ENST00000614659 ASXL2Q76L83 1435 aa17.89■□□□□ 0.46
SNPH-203ENST00000614659 RAPGEF6Q8TEU7 1601 aa17.89■□□□□ 0.45
SNPH-203ENST00000614659 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
SNPH-203ENST00000614659 IFIT2P09913 472 aaKnown RBP17.89■□□□□ 0.45
SNPH-203ENST00000614659 H3BQV1 296 aa17.88■□□□□ 0.45
SNPH-203ENST00000614659 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
SNPH-203ENST00000614659 CLSTN1O94985 981 aa17.88■□□□□ 0.45
SNPH-203ENST00000614659 GNAI3P08754 354 aa17.88■□□□□ 0.45
SNPH-203ENST00000614659 LNPKQ9C0E8 428 aa17.88■□□□□ 0.45
SNPH-203ENST00000614659 VSIG10Q8N0Z9 540 aa17.87■□□□□ 0.45
SNPH-203ENST00000614659 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms