RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
CDH4-202ENST00000611855 TRAK1Q9UPV9 953 aa13.91□□□□□ -0.18
CDH4-202ENST00000611855 UNC13BO14795 1591 aa13.91□□□□□ -0.18
CDH4-202ENST00000611855 CHMP5Q9NZZ3 219 aa13.91□□□□□ -0.18
CDH4-202ENST00000611855 SYNMO15061 1565 aa13.91□□□□□ -0.18
CDH4-202ENST00000611855 TTC37Q6PGP7 1564 aa13.91□□□□□ -0.18
CDH4-202ENST00000611855 MTHFSP49914 203 aa13.9□□□□□ -0.18
CDH4-202ENST00000611855 ITPRIPQ8IWB1 547 aa13.9□□□□□ -0.18
CDH4-202ENST00000611855 RUNDC1Q96C34 613 aa13.9□□□□□ -0.18
CDH4-202ENST00000611855 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
CDH4-202ENST00000611855 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
CDH4-202ENST00000611855 MADDQ8WXG6 1647 aa13.89□□□□□ -0.19
CDH4-202ENST00000611855 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
CDH4-202ENST00000611855 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDH4-202ENST00000611855 IQGAP3Q86VI3 1631 aa13.89□□□□□ -0.19
CDH4-202ENST00000611855 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
CDH4-202ENST00000611855 MYOM1P52179 1685 aa13.88□□□□□ -0.19
CDH4-202ENST00000611855 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
CDH4-202ENST00000611855 SMC4Q9NTJ3 1288 aa13.88□□□□□ -0.19
CDH4-202ENST00000611855 HSCBQ8IWL3 235 aa13.88□□□□□ -0.19
CDH4-202ENST00000611855 IQGAP1P46940 1657 aa13.88□□□□□ -0.19
CDH4-202ENST00000611855 NSD3Q9BZ95 1437 aa13.87□□□□□ -0.19
CDH4-202ENST00000611855 GAS2L3Q86XJ1 694 aa13.87□□□□□ -0.19
CDH4-202ENST00000611855 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
CDH4-202ENST00000611855 MAST1Q9Y2H9 1570 aa13.87□□□□□ -0.19
CDH4-202ENST00000611855 CHD1O14646 1710 aa13.87□□□□□ -0.19
CDH4-202ENST00000611855 TMEM132EQ6IEE7 984 aa13.87□□□□□ -0.19
CDH4-202ENST00000611855 PDCL3Q9H2J4 239 aa13.87□□□□□ -0.19
CDH4-202ENST00000611855 NUTM2DQ5VT03 806 aaPredicted RBP13.86□□□□□ -0.19
CDH4-202ENST00000611855 ZKSCAN2Q63HK3 967 aa13.86□□□□□ -0.19
CDH4-202ENST00000611855 ERVK-7P63135 1459 aa13.86□□□□□ -0.19
CDH4-202ENST00000611855 U2SURPO15042 1029 aaKnown RBP13.86□□□□□ -0.19
CDH4-202ENST00000611855 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDH4-202ENST00000611855 LNPKQ9C0E8 428 aa13.86□□□□□ -0.19
CDH4-202ENST00000611855 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
CDH4-202ENST00000611855 KIF3BO15066 747 aa13.85□□□□□ -0.19
CDH4-202ENST00000611855 TPM2P07951 284 aa13.85□□□□□ -0.19
CDH4-202ENST00000611855 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
CDH4-202ENST00000611855 TRAPPC8Q9Y2L5 1435 aa13.85□□□□□ -0.19
CDH4-202ENST00000611855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.19
CDH4-202ENST00000611855 NINLQ9Y2I6 1382 aa13.85□□□□□ -0.19
CDH4-202ENST00000611855 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
CDH4-202ENST00000611855 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
CDH4-202ENST00000611855 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
CDH4-202ENST00000611855 ATP10AO60312 1499 aa13.84□□□□□ -0.19
CDH4-202ENST00000611855 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
CDH4-202ENST00000611855 TRIM27P14373 513 aa13.84□□□□□ -0.19
CDH4-202ENST00000611855 DUOX2Q9NRD8 1548 aa13.84□□□□□ -0.19
CDH4-202ENST00000611855 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
CDH4-202ENST00000611855 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
CDH4-202ENST00000611855 HSP90AB1P08238 724 aaKnown RBP13.83□□□□□ -0.2
CDH4-202ENST00000611855 R3HCC1Q9Y3T6 440 aaKnown RBP13.83□□□□□ -0.2
CDH4-202ENST00000611855 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.2
CDH4-202ENST00000611855 SSH1Q8WYL5 1049 aa13.83□□□□□ -0.2
CDH4-202ENST00000611855 MSNP26038 577 aaKnown RBP13.82□□□□□ -0.2
CDH4-202ENST00000611855 EFCAB2Q5VUJ9 269 aa13.82□□□□□ -0.2
CDH4-202ENST00000611855 TNPO1Q92973 898 aaKnown RBP13.82□□□□□ -0.2
CDH4-202ENST00000611855 ANP32BQ92688 251 aaKnown RBP13.82□□□□□ -0.2
CDH4-202ENST00000611855 NOB1Q9ULX3 412 aaKnown RBP13.82□□□□□ -0.2
CDH4-202ENST00000611855 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
CDH4-202ENST00000611855 CLTCL1P53675 1640 aa13.81□□□□□ -0.2
CDH4-202ENST00000611855 WDR63Q8IWG1 891 aa13.81□□□□□ -0.2
CDH4-202ENST00000611855 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
CDH4-202ENST00000611855 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
CDH4-202ENST00000611855 CEP152O94986 1710 aa13.81□□□□□ -0.2
CDH4-202ENST00000611855 TMEM57Q8N5G2 664 aa13.81□□□□□ -0.2
CDH4-202ENST00000611855 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
CDH4-202ENST00000611855 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
CDH4-202ENST00000611855 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
CDH4-202ENST00000611855 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
CDH4-202ENST00000611855 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
CDH4-202ENST00000611855 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
CDH4-202ENST00000611855 PRDM10Q9NQV6 1147 aa13.8□□□□□ -0.2
CDH4-202ENST00000611855 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
CDH4-202ENST00000611855 NASPP49321 788 aaPredicted RBP13.78□□□□□ -0.2
CDH4-202ENST00000611855 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
CDH4-202ENST00000611855 PLXNC1O60486 1568 aa13.78□□□□□ -0.2
CDH4-202ENST00000611855 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.2
CDH4-202ENST00000611855 GBP4Q96PP9 640 aa13.77□□□□□ -0.21
CDH4-202ENST00000611855 ATF7IPQ6VMQ6 1270 aa13.77□□□□□ -0.21
CDH4-202ENST00000611855 GGNBP2Q9H3C7 697 aa13.76□□□□□ -0.21
CDH4-202ENST00000611855 SSFA2P28290 1259 aa13.76□□□□□ -0.21
CDH4-202ENST00000611855 CABP2Q9NPB3 220 aa13.76□□□□□ -0.21
CDH4-202ENST00000611855 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
CDH4-202ENST00000611855 PTPRTO14522 1441 aa13.75□□□□□ -0.21
CDH4-202ENST00000611855 RIPK4P57078 832 aa13.75□□□□□ -0.21
CDH4-202ENST00000611855 ANKRD45Q5TZF3 282 aa13.75□□□□□ -0.21
CDH4-202ENST00000611855 ZSCAN30Q86W11 494 aa13.75□□□□□ -0.21
CDH4-202ENST00000611855 DDX19BQ9UMR2 479 aa13.75□□□□□ -0.21
CDH4-202ENST00000611855 TRPM2O94759 1503 aa13.75□□□□□ -0.21
CDH4-202ENST00000611855 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
CDH4-202ENST00000611855 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
CDH4-202ENST00000611855 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
CDH4-202ENST00000611855 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
CDH4-202ENST00000611855 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
CDH4-202ENST00000611855 AAMPQ13685 434 aa13.74□□□□□ -0.21
CDH4-202ENST00000611855 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
CDH4-202ENST00000611855 IQSEC2Q5JU85 1478 aa13.74□□□□□ -0.21
CDH4-202ENST00000611855 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
CDH4-202ENST00000611855 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms