RNA–Protein interactions for RNA: ENST00000611228.4

UBE2U-206, Transcript of ubiquitin conjugating enzyme E2 U, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBE2U, Length 1,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2U-206ENST00000611228 ROBO1Q9Y6N7 1651 aa12.59□□□□□ -0.39
UBE2U-206ENST00000611228 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
UBE2U-206ENST00000611228 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
UBE2U-206ENST00000611228 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.39
UBE2U-206ENST00000611228 PROSER2Q86WR7 435 aaPredicted RBP12.58□□□□□ -0.4
UBE2U-206ENST00000611228 SLC26A8Q96RN1 970 aa12.58□□□□□ -0.4
UBE2U-206ENST00000611228 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
UBE2U-206ENST00000611228 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
UBE2U-206ENST00000611228 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
UBE2U-206ENST00000611228 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
UBE2U-206ENST00000611228 BCANQ96GW7 911 aa12.56□□□□□ -0.4
UBE2U-206ENST00000611228 MSH6P52701 1360 aa12.56□□□□□ -0.4
UBE2U-206ENST00000611228 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
UBE2U-206ENST00000611228 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
UBE2U-206ENST00000611228 RIMS2Q9UQ26 1411 aa12.55□□□□□ -0.4
UBE2U-206ENST00000611228 E9PCH4 1651 aa12.55□□□□□ -0.4
UBE2U-206ENST00000611228 STK24Q9Y6E0 443 aa12.55□□□□□ -0.4
UBE2U-206ENST00000611228 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
UBE2U-206ENST00000611228 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
UBE2U-206ENST00000611228 DIP2AQ14689 1571 aa12.54□□□□□ -0.4
UBE2U-206ENST00000611228 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
UBE2U-206ENST00000611228 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
UBE2U-206ENST00000611228 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
UBE2U-206ENST00000611228 PHLPP1O60346 1717 aa12.52□□□□□ -0.4
UBE2U-206ENST00000611228 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.4
UBE2U-206ENST00000611228 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.52□□□□□ -0.4
UBE2U-206ENST00000611228 NCOA3Q9Y6Q9 1424 aa12.52□□□□□ -0.41
UBE2U-206ENST00000611228 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
UBE2U-206ENST00000611228 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
UBE2U-206ENST00000611228 TBX22Q9Y458 520 aa12.51□□□□□ -0.41
UBE2U-206ENST00000611228 RBM33Q96EV2 1170 aaKnown RBP12.5□□□□□ -0.41
UBE2U-206ENST00000611228 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
UBE2U-206ENST00000611228 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
UBE2U-206ENST00000611228 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
UBE2U-206ENST00000611228 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
UBE2U-206ENST00000611228 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
UBE2U-206ENST00000611228 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
UBE2U-206ENST00000611228 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
UBE2U-206ENST00000611228 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
UBE2U-206ENST00000611228 TRPM2O94759 1503 aa12.48□□□□□ -0.41
UBE2U-206ENST00000611228 ADAMTS13Q76LX8 1427 aa12.48□□□□□ -0.41
UBE2U-206ENST00000611228 JCADQ9P266 1359 aa12.48□□□□□ -0.41
UBE2U-206ENST00000611228 MAP3K13O43283 966 aa12.47□□□□□ -0.41
UBE2U-206ENST00000611228 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
UBE2U-206ENST00000611228 SPHKAPQ2M3C7 1700 aa12.47□□□□□ -0.41
UBE2U-206ENST00000611228 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.47□□□□□ -0.41
UBE2U-206ENST00000611228 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
UBE2U-206ENST00000611228 NUP155O75694 1391 aa12.46□□□□□ -0.41
UBE2U-206ENST00000611228 C14orf37Q86TY3 774 aa12.46□□□□□ -0.42
UBE2U-206ENST00000611228 PSEN1P49768 467 aa12.45□□□□□ -0.42
UBE2U-206ENST00000611228 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
UBE2U-206ENST00000611228 AHDC1Q5TGY3 1603 aaPredicted RBP12.44□□□□□ -0.42
UBE2U-206ENST00000611228 SHPRHQ149N8 1683 aa12.44□□□□□ -0.42
UBE2U-206ENST00000611228 POTEAQ6S8J7 498 aa12.43□□□□□ -0.42
UBE2U-206ENST00000611228 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
UBE2U-206ENST00000611228 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
UBE2U-206ENST00000611228 ATF3P18847 181 aa12.43□□□□□ -0.42
UBE2U-206ENST00000611228 NUTM2DQ5VT03 806 aaPredicted RBP12.43□□□□□ -0.42
UBE2U-206ENST00000611228 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
UBE2U-206ENST00000611228 DCCP43146 1447 aa12.42□□□□□ -0.42
UBE2U-206ENST00000611228 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
UBE2U-206ENST00000611228 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
UBE2U-206ENST00000611228 NRXN3Q9Y4C0 1643 aa12.42□□□□□ -0.42
UBE2U-206ENST00000611228 SPATA31A6Q5VVP1 1343 aa12.42□□□□□ -0.42
UBE2U-206ENST00000611228 ITGAEP38570 1179 aa12.4□□□□□ -0.42
UBE2U-206ENST00000611228 AMOTL2Q9Y2J4 779 aa12.4□□□□□ -0.42
UBE2U-206ENST00000611228 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
UBE2U-206ENST00000611228 SETD1AO15047 1707 aaKnown RBP12.39□□□□□ -0.43
UBE2U-206ENST00000611228 KIF1BO60333 1816 aa12.39□□□□□ -0.43
UBE2U-206ENST00000611228 RYDENQ9NUL5 291 aaKnown RBP12.39□□□□□ -0.43
UBE2U-206ENST00000611228 LRP6O75581 1613 aa12.38□□□□□ -0.43
UBE2U-206ENST00000611228 ZNF326Q5BKZ1 582 aaKnown RBP12.37□□□□□ -0.43
UBE2U-206ENST00000611228 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
UBE2U-206ENST00000611228 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
UBE2U-206ENST00000611228 NHSL1Q5SYE7 1610 aa12.37□□□□□ -0.43
UBE2U-206ENST00000611228 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
UBE2U-206ENST00000611228 ZNF772Q68DY9 489 aaPredicted RBP12.36□□□□□ -0.43
UBE2U-206ENST00000611228 NEXMIFQ5QGS0 1516 aa12.36□□□□□ -0.43
UBE2U-206ENST00000611228 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
UBE2U-206ENST00000611228 NALCNQ8IZF0 1738 aa12.34□□□□□ -0.43
UBE2U-206ENST00000611228 MST1RQ04912 1400 aa12.34□□□□□ -0.43
UBE2U-206ENST00000611228 ADGRL3Q9HAR2 1447 aa12.34□□□□□ -0.43
UBE2U-206ENST00000611228 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
UBE2U-206ENST00000611228 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
UBE2U-206ENST00000611228 METP08581 1390 aa12.33□□□□□ -0.44
UBE2U-206ENST00000611228 NAIPQ13075 1403 aa12.32□□□□□ -0.44
UBE2U-206ENST00000611228 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
UBE2U-206ENST00000611228 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
UBE2U-206ENST00000611228 PTCH1Q13635 1447 aa12.31□□□□□ -0.44
UBE2U-206ENST00000611228 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
UBE2U-206ENST00000611228 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
UBE2U-206ENST00000611228 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
UBE2U-206ENST00000611228 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
UBE2U-206ENST00000611228 LAMC1P11047 1609 aa12.29□□□□□ -0.44
UBE2U-206ENST00000611228 PPLO60437 1756 aa12.29□□□□□ -0.44
UBE2U-206ENST00000611228 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
UBE2U-206ENST00000611228 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
UBE2U-206ENST00000611228 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
UBE2U-206ENST00000611228 RXRBP28702 533 aa12.28□□□□□ -0.44
UBE2U-206ENST00000611228 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms