RNA–Protein interactions for RNA: ENST00000608535.1

SMIM8-208, Transcript of small integral membrane protein 8, humanhuman

Gene SMIM8, Length 3,915 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-208ENST00000608535 BDNFP23560 247 aa11.9□□□□□ -0.51
SMIM8-208ENST00000608535 CLEC4GQ6UXB4 293 aa11.9□□□□□ -0.51
SMIM8-208ENST00000608535 RPAINQ86UA6 219 aa11.9□□□□□ -0.51
SMIM8-208ENST00000608535 ZNF330Q9Y3S2 320 aaPredicted RBP11.9□□□□□ -0.51
SMIM8-208ENST00000608535 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.89□□□□□ -0.51
SMIM8-208ENST00000608535 PSEN1P49768 467 aa11.89□□□□□ -0.51
SMIM8-208ENST00000608535 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
SMIM8-208ENST00000608535 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
SMIM8-208ENST00000608535 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
SMIM8-208ENST00000608535 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
SMIM8-208ENST00000608535 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 PRDM4Q9UKN5 801 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 DYTNA2CJ06 578 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 PES1O00541 588 aaKnown RBP11.88□□□□□ -0.51
SMIM8-208ENST00000608535 C9orf131Q5VYM1 1079 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 NUB1Q9Y5A7 615 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 HOXA2O43364 376 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
SMIM8-208ENST00000608535 AMOTL1Q8IY63 956 aa11.87□□□□□ -0.51
SMIM8-208ENST00000608535 PUF60Q9UHX1 559 aaKnown RBP11.87□□□□□ -0.51
SMIM8-208ENST00000608535 ERICH4A6NGS2 130 aa11.87□□□□□ -0.51
SMIM8-208ENST00000608535 NAP1L1P55209 391 aaKnown RBP11.87□□□□□ -0.51
SMIM8-208ENST00000608535 MYCBPQ99417 103 aaPredicted RBP11.87□□□□□ -0.51
SMIM8-208ENST00000608535 MPHOSPH6Q99547 160 aaKnown RBP11.87□□□□□ -0.51
SMIM8-208ENST00000608535 TMEM51Q9NW97 253 aa11.87□□□□□ -0.51
SMIM8-208ENST00000608535 TRIM66O15016 1216 aa11.86□□□□□ -0.51
SMIM8-208ENST00000608535 RPS6KC1Q96S38 1066 aa11.86□□□□□ -0.51
SMIM8-208ENST00000608535 IBSPP21815 317 aaPredicted RBP11.86□□□□□ -0.51
SMIM8-208ENST00000608535 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
SMIM8-208ENST00000608535 MAP3K20Q9NYL2 800 aaKnown RBP11.86□□□□□ -0.51
SMIM8-208ENST00000608535 TAF3Q5VWG9 929 aa11.86□□□□□ -0.51
SMIM8-208ENST00000608535 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
SMIM8-208ENST00000608535 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
SMIM8-208ENST00000608535 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
SMIM8-208ENST00000608535 HELBQ8NG08 1087 aaPredicted RBP11.86□□□□□ -0.51
SMIM8-208ENST00000608535 MAP2K1Q02750 393 aaPredicted RBP11.85□□□□□ -0.51
SMIM8-208ENST00000608535 PTPROQ16827 1216 aa11.85□□□□□ -0.51
SMIM8-208ENST00000608535 C1orf131Q8NDD1 294 aaKnown RBP11.85□□□□□ -0.51
SMIM8-208ENST00000608535 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
SMIM8-208ENST00000608535 CC2D1AQ6P1N0 951 aaPredicted RBP11.85□□□□□ -0.51
SMIM8-208ENST00000608535 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
SMIM8-208ENST00000608535 LRRC27Q9C0I9 530 aa11.85□□□□□ -0.51
SMIM8-208ENST00000608535 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
SMIM8-208ENST00000608535 RBM47A0AV96 593 aaKnown RBP11.85□□□□□ -0.51
SMIM8-208ENST00000608535 ZNF16P17020 682 aaPredicted RBP11.85□□□□□ -0.51
SMIM8-208ENST00000608535 NCAPD3P42695 1498 aa11.85□□□□□ -0.51
SMIM8-208ENST00000608535 PAF1Q8N7H5 531 aa11.84□□□□□ -0.51
SMIM8-208ENST00000608535 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
SMIM8-208ENST00000608535 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
SMIM8-208ENST00000608535 LMNB1P20700 586 aa11.83□□□□□ -0.52
SMIM8-208ENST00000608535 PUS10Q3MIT2 529 aaKnown RBP11.83□□□□□ -0.52
SMIM8-208ENST00000608535 NGEFQ8N5V2 710 aa11.83□□□□□ -0.52
SMIM8-208ENST00000608535 MAF1Q9H063 256 aa11.83□□□□□ -0.52
SMIM8-208ENST00000608535 NEXNQ0ZGT2 675 aa11.82□□□□□ -0.52
SMIM8-208ENST00000608535 IQSEC3Q9UPP2 1182 aaPredicted RBP11.82□□□□□ -0.52
SMIM8-208ENST00000608535 GYS2P54840 703 aa11.82□□□□□ -0.52
SMIM8-208ENST00000608535 HMGN5P82970 282 aaKnown RBP11.82□□□□□ -0.52
SMIM8-208ENST00000608535 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
SMIM8-208ENST00000608535 PPP1R15AO75807 674 aaPredicted RBP11.81□□□□□ -0.52
SMIM8-208ENST00000608535 KLF15Q9UIH9 416 aa11.81□□□□□ -0.52
SMIM8-208ENST00000608535 MFSD4BQ5TF39 518 aa11.81□□□□□ -0.52
SMIM8-208ENST00000608535 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
SMIM8-208ENST00000608535 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
SMIM8-208ENST00000608535 TANGO6Q9C0B7 1094 aa11.8□□□□□ -0.52
SMIM8-208ENST00000608535 PAIP2Q9BPZ3 127 aaKnown RBP11.8□□□□□ -0.52
SMIM8-208ENST00000608535 COPB2P35606 906 aa11.8□□□□□ -0.52
SMIM8-208ENST00000608535 DIS3Q9Y2L1 958 aaKnown RBP11.8□□□□□ -0.52
SMIM8-208ENST00000608535 IPO8O15397 1037 aaKnown RBP11.79□□□□□ -0.52
SMIM8-208ENST00000608535 SF3A1Q15459 793 aaKnown RBP11.79□□□□□ -0.52
SMIM8-208ENST00000608535 SKAP1Q86WV1 359 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 FAM160A1Q05DH4 1040 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 ACRBPQ8NEB7 543 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 TCEAL9Q9UHQ7 104 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 EXOC5O00471 708 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 GTF2F1P35269 517 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMIM8-208ENST00000608535 SETDB1Q15047 1291 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 TSNAXIP1Q2TAA8 658 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 PMFBP1Q8TBY8 1022 aa11.79□□□□□ -0.52
SMIM8-208ENST00000608535 DHX38Q92620 1227 aaKnown RBP11.78□□□□□ -0.52
SMIM8-208ENST00000608535 PAGR1Q9BTK6 254 aa11.78□□□□□ -0.52
SMIM8-208ENST00000608535 LNPKQ9C0E8 428 aa11.78□□□□□ -0.52
SMIM8-208ENST00000608535 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
SMIM8-208ENST00000608535 NRBP1Q9UHY1 535 aa11.78□□□□□ -0.52
SMIM8-208ENST00000608535 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
SMIM8-208ENST00000608535 PSME1Q06323 249 aa11.77□□□□□ -0.52
SMIM8-208ENST00000608535 ICE2Q659A1 982 aa11.77□□□□□ -0.53
SMIM8-208ENST00000608535 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
SMIM8-208ENST00000608535 STK26Q9P289 416 aa11.77□□□□□ -0.53
SMIM8-208ENST00000608535 MPHOSPH10O00566 681 aaKnown RBP11.77□□□□□ -0.53
SMIM8-208ENST00000608535 SFMBT1Q9UHJ3 866 aa11.76□□□□□ -0.53
SMIM8-208ENST00000608535 NPHP1O15259 732 aa11.76□□□□□ -0.53
SMIM8-208ENST00000608535 LARGE2Q8N3Y3 721 aa11.76□□□□□ -0.53
SMIM8-208ENST00000608535 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
SMIM8-208ENST00000608535 SPACA7Q96KW9 195 aa11.75□□□□□ -0.53
SMIM8-208ENST00000608535 L1TD1Q5T7N2 865 aaKnown RBP11.75□□□□□ -0.53
SMIM8-208ENST00000608535 FNBP4Q8N3X1 1017 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms