RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 CADPSQ9ULU8 1353 aa8.53□□□□□ -1.04
SNX5-218ENST00000606570 NAIPQ13075 1403 aa8.53□□□□□ -1.04
SNX5-218ENST00000606570 NCAPGQ9BPX3 1015 aa8.53□□□□□ -1.04
SNX5-218ENST00000606570 DHX16O60231 1041 aaKnown RBP8.52□□□□□ -1.04
SNX5-218ENST00000606570 SIRT1Q96EB6 747 aa8.52□□□□□ -1.04
SNX5-218ENST00000606570 PANK2Q9BZ23 570 aa8.52□□□□□ -1.04
SNX5-218ENST00000606570 SLKQ9H2G2 1235 aaPredicted RBP8.52□□□□□ -1.04
SNX5-218ENST00000606570 ZKSCAN8Q15776 578 aaPredicted RBP8.52□□□□□ -1.05
SNX5-218ENST00000606570 KIF3AQ9Y496 699 aa8.52□□□□□ -1.05
SNX5-218ENST00000606570 BRD1O95696 1058 aa8.52□□□□□ -1.05
SNX5-218ENST00000606570 ZNF853P0CG23 659 aa8.52□□□□□ -1.05
SNX5-218ENST00000606570 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.52□□□□□ -1.05
SNX5-218ENST00000606570 CDCA7LQ96GN5 454 aa8.52□□□□□ -1.05
SNX5-218ENST00000606570 PAIP2Q9BPZ3 127 aaKnown RBP8.52□□□□□ -1.05
SNX5-218ENST00000606570 NCOA1Q15788 1441 aa8.52□□□□□ -1.05
SNX5-218ENST00000606570 MAP3K1Q13233 1512 aa8.51□□□□□ -1.05
SNX5-218ENST00000606570 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.055e-9■■■■□ 20.4
SNX5-218ENST00000606570 DYNC1I1O14576 645 aa8.51□□□□□ -1.05
SNX5-218ENST00000606570 USP47Q96K76 1375 aa8.51□□□□□ -1.05
SNX5-218ENST00000606570 BIRC2Q13490 618 aa8.51□□□□□ -1.05
SNX5-218ENST00000606570 PTPRKQ15262 1439 aa8.51□□□□□ -1.05
SNX5-218ENST00000606570 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
SNX5-218ENST00000606570 OFD1O75665 1012 aa8.5□□□□□ -1.05
SNX5-218ENST00000606570 CALRP27797 417 aaKnown RBP8.5□□□□□ -1.05
SNX5-218ENST00000606570 HDAC1Q13547 482 aaPredicted RBP8.5□□□□□ -1.05
SNX5-218ENST00000606570 BECN1Q14457 450 aa8.5□□□□□ -1.05
SNX5-218ENST00000606570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.5□□□□□ -1.05
SNX5-218ENST00000606570 ATL2Q8NHH9 583 aa8.5□□□□□ -1.05
SNX5-218ENST00000606570 UPF2Q9HAU5 1272 aaKnown RBP8.5□□□□□ -1.05
SNX5-218ENST00000606570 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
SNX5-218ENST00000606570 MYOM3Q5VTT5 1437 aa8.5□□□□□ -1.05
SNX5-218ENST00000606570 WDR43Q15061 677 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX5-218ENST00000606570 MYBBP1AQ9BQG0 1328 aaKnown RBP8.49□□□□□ -1.05
SNX5-218ENST00000606570 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
SNX5-218ENST00000606570 PDE3BQ13370 1112 aa8.49□□□□□ -1.05
SNX5-218ENST00000606570 PCF11O94913 1555 aaKnown RBP8.49□□□□□ -1.05
SNX5-218ENST00000606570 CASKIN1Q8WXD9 1431 aa8.49□□□□□ -1.05
SNX5-218ENST00000606570 FANCD2Q9BXW9 1451 aa8.49□□□□□ -1.05
SNX5-218ENST00000606570 NRDCO43847 1150 aa8.49□□□□□ -1.05
SNX5-218ENST00000606570 MSNP26038 577 aaKnown RBP8.49□□□□□ -1.05
SNX5-218ENST00000606570 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
SNX5-218ENST00000606570 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
SNX5-218ENST00000606570 GOLGA6CA6NDK9 693 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 GOLGA6BA6NDN3 693 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 GOLGA6DP0CG33 693 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 DNAJC21Q5F1R6 531 aaKnown RBP8.48□□□□□ -1.05
SNX5-218ENST00000606570 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
SNX5-218ENST00000606570 GOLGA6AQ9NYA3 693 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 NOL8Q76FK4 1167 aaKnown RBP8.48□□□□□ -1.05
SNX5-218ENST00000606570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNX5-218ENST00000606570 KIF15Q9NS87 1388 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 MTA1Q13330 715 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 LRCH2Q5VUJ6 765 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 NCOA2Q15596 1464 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 RAD54L2Q9Y4B4 1467 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 SCP2P22307 547 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 BORCS6Q96GS4 357 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
SNX5-218ENST00000606570 CREBRFQ8IUR6 639 aa8.47□□□□□ -1.05
SNX5-218ENST00000606570 TOMM22Q9NS69 142 aa8.47□□□□□ -1.05
SNX5-218ENST00000606570 BSDC1Q9NW68 430 aaPredicted RBP8.47□□□□□ -1.05
SNX5-218ENST00000606570 FYCO1Q9BQS8 1478 aa8.47□□□□□ -1.05
SNX5-218ENST00000606570 RNF123Q5XPI4 1314 aa8.46□□□□□ -1.05
SNX5-218ENST00000606570 KTN1Q86UP2 1357 aaKnown RBP8.46□□□□□ -1.05
SNX5-218ENST00000606570 ECM2O94769 699 aaPredicted RBP8.46□□□□□ -1.05
SNX5-218ENST00000606570 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.05
SNX5-218ENST00000606570 RIPOR2Q9Y4F9 1068 aa8.46□□□□□ -1.05
SNX5-218ENST00000606570 KIF21AQ7Z4S6 1674 aa8.46□□□□□ -1.05
SNX5-218ENST00000606570 RBM26Q5T8P6 1007 aaKnown RBP8.46□□□□□ -1.06
SNX5-218ENST00000606570 ITFG2Q969R8 447 aa8.46□□□□□ -1.06
SNX5-218ENST00000606570 CALCOCO1Q9P1Z2 691 aa8.46□□□□□ -1.06
SNX5-218ENST00000606570 MYBPC2Q14324 1141 aa8.46□□□□□ -1.06
SNX5-218ENST00000606570 CENPQQ7L2Z9 268 aaPredicted RBP8.46□□□□□ -1.06
SNX5-218ENST00000606570 TSPAN18Q96SJ8 248 aa8.46□□□□□ -1.06
SNX5-218ENST00000606570 NOL10Q9BSC4 688 aaKnown RBP8.46□□□□□ -1.06
SNX5-218ENST00000606570 PTPN23Q9H3S7 1636 aa8.45□□□□□ -1.06
SNX5-218ENST00000606570 NUTM2GQ5VZR2 741 aa8.45□□□□□ -1.06
SNX5-218ENST00000606570 ROCK2O75116 1388 aaKnown RBP8.45□□□□□ -1.06
SNX5-218ENST00000606570 GET4Q7L5D6 327 aaPredicted RBP8.45□□□□□ -1.06
SNX5-218ENST00000606570 ANKRD23Q86SG2 305 aa8.45□□□□□ -1.06
SNX5-218ENST00000606570 SPINK5Q9NQ38 1064 aaPredicted RBP8.45□□□□□ -1.06
SNX5-218ENST00000606570 DONSONQ9NYP3 566 aa8.45□□□□□ -1.06
SNX5-218ENST00000606570 RSPH14Q9UHP6 348 aa8.45□□□□□ -1.06
SNX5-218ENST00000606570 CHGAP10645 457 aaKnown RBP8.45□□□□□ -1.06
SNX5-218ENST00000606570 CCT2P78371 535 aaKnown RBP8.45□□□□□ -1.06
SNX5-218ENST00000606570 MFSD4BQ5TF39 518 aa8.45□□□□□ -1.06
SNX5-218ENST00000606570 ARHGEF1Q92888 912 aaKnown RBP8.45□□□□□ -1.06
SNX5-218ENST00000606570 MRE11P49959 708 aa8.44□□□□□ -1.06
SNX5-218ENST00000606570 KIF16BQ96L93 1317 aa8.44□□□□□ -1.06
SNX5-218ENST00000606570 APBB1O00213 710 aa8.44□□□□□ -1.06
SNX5-218ENST00000606570 SPDYE4A6NLX3 237 aa8.44□□□□□ -1.06
SNX5-218ENST00000606570 SSFA2P28290 1259 aa8.44□□□□□ -1.06
SNX5-218ENST00000606570 APBB1IPQ7Z5R6 666 aaPredicted RBP8.44□□□□□ -1.06
SNX5-218ENST00000606570 FAM212AQ96EL1 285 aa8.44□□□□□ -1.06
SNX5-218ENST00000606570 MFAP1P55081 439 aaKnown RBP8.43□□□□□ -1.06
SNX5-218ENST00000606570 FOXD4Q12950 439 aaPredicted RBP8.43□□□□□ -1.06
SNX5-218ENST00000606570 SF3A1Q15459 793 aaKnown RBP8.43□□□□□ -1.06
SNX5-218ENST00000606570 CFDP1Q9UEE9 299 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms