RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 COL16A1Q07092 1604 aaPredicted RBP15.21■□□□□ 0.03
SCNM1-207ENST00000602841 NUTM2BA6NNL0 878 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-207ENST00000602841 NUTM2EB1AL46 878 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-207ENST00000602841 NUTM2AQ8IVF1 878 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-207ENST00000602841 WASHC2AQ641Q2 1341 aa15.19■□□□□ 0.02
SCNM1-207ENST00000602841 METP08581 1390 aa15.19■□□□□ 0.02
SCNM1-207ENST00000602841 AFF2P51816 1311 aa15.18■□□□□ 0.02
SCNM1-207ENST00000602841 MSH6P52701 1360 aa15.16■□□□□ 0.02
SCNM1-207ENST00000602841 HDGFP51858 240 aaKnown RBP15.16■□□□□ 0.02
SCNM1-207ENST00000602841 RBM6P78332 1123 aaKnown RBP15.16■□□□□ 0.02
SCNM1-207ENST00000602841 EID1Q9Y6B2 187 aa15.16■□□□□ 0.02
SCNM1-207ENST00000602841 PTPRUQ92729 1446 aa15.16■□□□□ 0.02
SCNM1-207ENST00000602841 QTRT2Q9H974 415 aaKnown RBP15.15■□□□□ 0.02
SCNM1-207ENST00000602841 KIF7Q2M1P5 1343 aa15.15■□□□□ 0.02
SCNM1-207ENST00000602841 LRPPRCP42704 1394 aaKnown RBP15.14■□□□□ 0.01
SCNM1-207ENST00000602841 CCDC7Q96M83 1385 aa15.14■□□□□ 0.01
SCNM1-207ENST00000602841 TBX22Q9Y458 520 aa15.14■□□□□ 0.01
SCNM1-207ENST00000602841 YTHDC2Q9H6S0 1430 aaKnown RBP15.14■□□□□ 0.01
SCNM1-207ENST00000602841 ABCC11Q96J66 1382 aa15.13■□□□□ 0.01
SCNM1-207ENST00000602841 SLC26A8Q96RN1 970 aa15.13■□□□□ 0.01
SCNM1-207ENST00000602841 TRAK1Q9UPV9 953 aa15.13■□□□□ 0.01
SCNM1-207ENST00000602841 ATAD2Q6PL18 1390 aa15.12■□□□□ 0.01
SCNM1-207ENST00000602841 TECPR2O15040 1411 aa15.11■□□□□ 0.01
SCNM1-207ENST00000602841 SIRT1Q96EB6 747 aa15.11■□□□□ 0.01
SCNM1-207ENST00000602841 SBNO2Q9Y2G9 1366 aa15.11■□□□□ 0.01
SCNM1-207ENST00000602841 DLC1Q96QB1 1528 aa15.1■□□□□ 0.01
SCNM1-207ENST00000602841 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
SCNM1-207ENST00000602841 ARHGEF28Q8N1W1 1705 aaKnown RBP15.09■□□□□ 0.01
SCNM1-207ENST00000602841 NKTRP30414 1462 aaKnown RBP15.08■□□□□ 0.01
SCNM1-207ENST00000602841 EP400Q96L91 3159 aa15.08■□□□□ 0
SCNM1-207ENST00000602841 CENPJQ9HC77 1338 aaPredicted RBP15.08■□□□□ 0
SCNM1-207ENST00000602841 PLEKHH1Q9ULM0 1364 aa15.08■□□□□ 0
SCNM1-207ENST00000602841 AHDC1Q5TGY3 1603 aaPredicted RBP15.07■□□□□ 0
SCNM1-207ENST00000602841 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
SCNM1-207ENST00000602841 C8orf37Q96NL8 207 aa15.07■□□□□ 0
SCNM1-207ENST00000602841 STK26Q9P289 416 aa15.07■□□□□ 0
SCNM1-207ENST00000602841 DIEXFQ68CQ4 756 aaKnown RBP15.06■□□□□ 0
SCNM1-207ENST00000602841 ROBO2Q9HCK4 1378 aa15.06■□□□□ 0
SCNM1-207ENST00000602841 DIP2AQ14689 1571 aa15.06■□□□□ 0
SCNM1-207ENST00000602841 WAPLQ7Z5K2 1190 aa15.05■□□□□ -0
SCNM1-207ENST00000602841 EIF3AQ14152 1382 aaKnown RBP15.05■□□□□ -0
SCNM1-207ENST00000602841 NWD1Q149M9 1564 aa15.05■□□□□ -0
SCNM1-207ENST00000602841 PIK3R4Q99570 1358 aa15.04■□□□□ -0
SCNM1-207ENST00000602841 CCDC125Q86Z20 511 aa15.04■□□□□ -0
SCNM1-207ENST00000602841 NGLY1Q96IV0 654 aa15.04■□□□□ -0
SCNM1-207ENST00000602841 PRAM1Q96QH2 718 aa15.04■□□□□ -0
SCNM1-207ENST00000602841 KNDC1Q76NI1 1749 aa15.03■□□□□ -0
SCNM1-207ENST00000602841 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
SCNM1-207ENST00000602841 TMF1P82094 1093 aa15.02■□□□□ -0
SCNM1-207ENST00000602841 AMOTL2Q9Y2J4 779 aa15.02■□□□□ -0
SCNM1-207ENST00000602841 XRN1Q8IZH2 1706 aaKnown RBP15.02□□□□□ -0.01
SCNM1-207ENST00000602841 BRINP3Q76B58 766 aa15.01□□□□□ -0.01
SCNM1-207ENST00000602841 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
SCNM1-207ENST00000602841 PTCH1Q13635 1447 aa15□□□□□ -0.01
SCNM1-207ENST00000602841 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
SCNM1-207ENST00000602841 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
SCNM1-207ENST00000602841 CADPS2Q86UW7 1296 aa14.99□□□□□ -0.01
SCNM1-207ENST00000602841 BCANQ96GW7 911 aa14.99□□□□□ -0.01
SCNM1-207ENST00000602841 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.98□□□□□ -0.01
SCNM1-207ENST00000602841 IFFO2Q5TF58 517 aa14.98□□□□□ -0.01
SCNM1-207ENST00000602841 LRP5O75197 1615 aa14.98□□□□□ -0.01
SCNM1-207ENST00000602841 NCOA3Q9Y6Q9 1424 aa14.98□□□□□ -0.01
SCNM1-207ENST00000602841 SAFB2Q14151 953 aaKnown RBP eCLIP14.97□□□□□ -0.01
SCNM1-207ENST00000602841 CHD2O14647 1828 aaKnown RBP14.96□□□□□ -0.01
SCNM1-207ENST00000602841 MINK1Q8N4C8 1332 aaPredicted RBP14.96□□□□□ -0.01
SCNM1-207ENST00000602841 SLC24A1O60721 1099 aa14.96□□□□□ -0.01
SCNM1-207ENST00000602841 MIER1Q8N108 512 aa14.96□□□□□ -0.01
SCNM1-207ENST00000602841 C19orf44Q9H6X5 657 aa14.96□□□□□ -0.01
SCNM1-207ENST00000602841 ATF3P18847 181 aa14.95□□□□□ -0.02
SCNM1-207ENST00000602841 C14orf37Q86TY3 774 aa14.95□□□□□ -0.02
SCNM1-207ENST00000602841 POGKQ9P215 609 aa14.95□□□□□ -0.02
SCNM1-207ENST00000602841 MYOM1P52179 1685 aa14.94□□□□□ -0.02
SCNM1-207ENST00000602841 LRRC59Q96AG4 307 aaKnown RBP14.94□□□□□ -0.02
SCNM1-207ENST00000602841 ADAMTS2O95450 1211 aa14.93□□□□□ -0.02
SCNM1-207ENST00000602841 DEFB132Q7Z7B7 95 aa14.93□□□□□ -0.02
SCNM1-207ENST00000602841 CDK19Q9BWU1 502 aa14.93□□□□□ -0.02
SCNM1-207ENST00000602841 CABP2Q9NPB3 220 aa14.93□□□□□ -0.02
SCNM1-207ENST00000602841 USP21Q9UK80 565 aa14.93□□□□□ -0.02
SCNM1-207ENST00000602841 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
SCNM1-207ENST00000602841 PNPLA6Q8IY17 1366 aa14.93□□□□□ -0.02
SCNM1-207ENST00000602841 ADGRB2O60241 1585 aa14.93□□□□□ -0.02
SCNM1-207ENST00000602841 EVC2Q86UK5 1308 aa14.92□□□□□ -0.02
SCNM1-207ENST00000602841 WASLO00401 505 aaPredicted RBP14.92□□□□□ -0.02
SCNM1-207ENST00000602841 CARD14Q9BXL6 1004 aa14.92□□□□□ -0.02
SCNM1-207ENST00000602841 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
SCNM1-207ENST00000602841 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
SCNM1-207ENST00000602841 YY1P25490 414 aa14.91□□□□□ -0.02
SCNM1-207ENST00000602841 CDCA8Q53HL2 280 aa14.91□□□□□ -0.02
SCNM1-207ENST00000602841 SLC12A5Q9H2X9 1139 aa14.91□□□□□ -0.02
SCNM1-207ENST00000602841 PANK3Q9H999 370 aa14.91□□□□□ -0.02
SCNM1-207ENST00000602841 DDX17Q92841 729 aaKnown RBP14.9□□□□□ -0.02
SCNM1-207ENST00000602841 FNBP4Q8N3X1 1017 aaPredicted RBP14.89□□□□□ -0.03
SCNM1-207ENST00000602841 ATRNO75882 1429 aa14.89□□□□□ -0.03
SCNM1-207ENST00000602841 PSDA5PKW4 1024 aaPredicted RBP14.88□□□□□ -0.03
SCNM1-207ENST00000602841 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
SCNM1-207ENST00000602841 BLMP54132 1417 aaPredicted RBP14.88□□□□□ -0.03
SCNM1-207ENST00000602841 ATP7BP35670 1465 aa14.86□□□□□ -0.03
SCNM1-207ENST00000602841 USP32Q8NFA0 1604 aa14.85□□□□□ -0.03
SCNM1-207ENST00000602841 AMER1Q5JTC6 1135 aaPredicted RBP14.85□□□□□ -0.03
SCNM1-207ENST00000602841 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms