RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
ZNF548-212ENST00000602086 ANKLE2Q86XL3 938 aa19.86■□□□□ 0.77
ZNF548-212ENST00000602086 ANP32CO43423 234 aa19.85■□□□□ 0.77
ZNF548-212ENST00000602086 HSPA1LP34931 641 aa19.85■□□□□ 0.77
ZNF548-212ENST00000602086 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
ZNF548-212ENST00000602086 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
ZNF548-212ENST00000602086 STK26Q9P289 416 aa19.82■□□□□ 0.76
ZNF548-212ENST00000602086 MYOM1P52179 1685 aa19.81■□□□□ 0.76
ZNF548-212ENST00000602086 EVC2Q86UK5 1308 aa19.81■□□□□ 0.76
ZNF548-212ENST00000602086 BCANQ96GW7 911 aa19.81■□□□□ 0.76
ZNF548-212ENST00000602086 PRAM1Q96QH2 718 aa19.8■□□□□ 0.76
ZNF548-212ENST00000602086 POLR3GLQ9BT43 218 aa19.8■□□□□ 0.76
ZNF548-212ENST00000602086 TULP4Q9NRJ4 1543 aa19.8■□□□□ 0.76
ZNF548-212ENST00000602086 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
ZNF548-212ENST00000602086 POGKQ9P215 609 aa19.79■□□□□ 0.76
ZNF548-212ENST00000602086 KTN1Q86UP2 1357 aaKnown RBP19.79■□□□□ 0.76
ZNF548-212ENST00000602086 PTCH1Q13635 1447 aa19.78■□□□□ 0.76
ZNF548-212ENST00000602086 TOM1O60784 492 aa19.78■□□□□ 0.76
ZNF548-212ENST00000602086 XRN1Q8IZH2 1706 aaKnown RBP19.77■□□□□ 0.76
ZNF548-212ENST00000602086 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.76
ZNF548-212ENST00000602086 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
ZNF548-212ENST00000602086 XIRP1Q702N8 1843 aaKnown RBP19.76■□□□□ 0.75
ZNF548-212ENST00000602086 PTPRUQ92729 1446 aa19.76■□□□□ 0.75
ZNF548-212ENST00000602086 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
ZNF548-212ENST00000602086 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
ZNF548-212ENST00000602086 PRKRIP1Q9H875 184 aaPredicted RBP19.74■□□□□ 0.75
ZNF548-212ENST00000602086 LRRC7Q96NW7 1537 aa19.74■□□□□ 0.75
ZNF548-212ENST00000602086 CHD2O14647 1828 aaKnown RBP19.74■□□□□ 0.75
ZNF548-212ENST00000602086 ATAD2Q6PL18 1390 aa19.73■□□□□ 0.75
ZNF548-212ENST00000602086 PANK3Q9H999 370 aa19.72■□□□□ 0.75
ZNF548-212ENST00000602086 ROBO2Q9HCK4 1378 aa19.71■□□□□ 0.75
ZNF548-212ENST00000602086 NPC1L1Q9UHC9 1359 aa19.71■□□□□ 0.75
ZNF548-212ENST00000602086 PLEKHH1Q9ULM0 1364 aa19.7■□□□□ 0.74
ZNF548-212ENST00000602086 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
ZNF548-212ENST00000602086 AMOTL2Q9Y2J4 779 aa19.7■□□□□ 0.74
ZNF548-212ENST00000602086 MINK1Q8N4C8 1332 aaPredicted RBP19.69■□□□□ 0.74
ZNF548-212ENST00000602086 RALBP1Q15311 655 aa19.68■□□□□ 0.74
ZNF548-212ENST00000602086 SAFB2Q14151 953 aaKnown RBP eCLIP19.67■□□□□ 0.74
ZNF548-212ENST00000602086 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
ZNF548-212ENST00000602086 NWD1Q149M9 1564 aa19.66■□□□□ 0.74
ZNF548-212ENST00000602086 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.66■□□□□ 0.74
ZNF548-212ENST00000602086 WASLO00401 505 aaPredicted RBP19.66■□□□□ 0.74
ZNF548-212ENST00000602086 CDK19Q9BWU1 502 aa19.66■□□□□ 0.74
ZNF548-212ENST00000602086 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
ZNF548-212ENST00000602086 ANKRD36BQ8N2N9 1353 aa19.65■□□□□ 0.74
ZNF548-212ENST00000602086 PARD3Q8TEW0 1356 aa19.65■□□□□ 0.74
ZNF548-212ENST00000602086 SRPK2P78362 688 aaKnown RBP19.64■□□□□ 0.73
ZNF548-212ENST00000602086 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.73
ZNF548-212ENST00000602086 CABP2Q9NPB3 220 aa19.63■□□□□ 0.73
ZNF548-212ENST00000602086 AMER1Q5JTC6 1135 aaPredicted RBP19.62■□□□□ 0.73
ZNF548-212ENST00000602086 ATP7BP35670 1465 aa19.61■□□□□ 0.73
ZNF548-212ENST00000602086 KCNA6P17658 529 aa19.61■□□□□ 0.73
ZNF548-212ENST00000602086 SLC12A5Q9H2X9 1139 aa19.61■□□□□ 0.73
ZNF548-212ENST00000602086 TMC1Q8TDI8 760 aa19.59■□□□□ 0.73
ZNF548-212ENST00000602086 MYBBP1AQ9BQG0 1328 aaKnown RBP19.58■□□□□ 0.73
ZNF548-212ENST00000602086 CARD14Q9BXL6 1004 aa19.58■□□□□ 0.72
ZNF548-212ENST00000602086 TERF2IPQ9NYB0 399 aa19.58■□□□□ 0.72
ZNF548-212ENST00000602086 NKTRP30414 1462 aaKnown RBP19.58■□□□□ 0.72
ZNF548-212ENST00000602086 TOPAZ1Q8N9V7 1692 aa19.57■□□□□ 0.72
ZNF548-212ENST00000602086 CD163L1Q9NR16 1453 aa19.57■□□□□ 0.72
ZNF548-212ENST00000602086 NSD2O96028 1365 aa19.57■□□□□ 0.72
ZNF548-212ENST00000602086 CCDC61Q9Y6R9 512 aa19.56■□□□□ 0.72
ZNF548-212ENST00000602086 CDC42BPGQ6DT37 1551 aa19.56■□□□□ 0.72
ZNF548-212ENST00000602086 BRD4O60885 1362 aaPredicted RBP19.56■□□□□ 0.72
ZNF548-212ENST00000602086 NUDT16Q96DE0 195 aaKnown RBP19.55■□□□□ 0.72
ZNF548-212ENST00000602086 NSD3Q9BZ95 1437 aa19.55■□□□□ 0.72
ZNF548-212ENST00000602086 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
ZNF548-212ENST00000602086 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
ZNF548-212ENST00000602086 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
ZNF548-212ENST00000602086 ROBO1Q9Y6N7 1651 aa19.54■□□□□ 0.72
ZNF548-212ENST00000602086 A0A1W2PP64 1363 aa19.54■□□□□ 0.72
ZNF548-212ENST00000602086 CPSF1Q10570 1443 aaKnown RBP19.53■□□□□ 0.72
ZNF548-212ENST00000602086 HDGFL2Q7Z4V5 671 aaPredicted RBP19.53■□□□□ 0.72
ZNF548-212ENST00000602086 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
ZNF548-212ENST00000602086 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
ZNF548-212ENST00000602086 CGNL1Q0VF96 1302 aa19.52■□□□□ 0.72
ZNF548-212ENST00000602086 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
ZNF548-212ENST00000602086 ADGRL3Q9HAR2 1447 aa19.52■□□□□ 0.72
ZNF548-212ENST00000602086 NALCNQ8IZF0 1738 aa19.52■□□□□ 0.72
ZNF548-212ENST00000602086 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
ZNF548-212ENST00000602086 AKAP12Q02952 1782 aa19.52■□□□□ 0.71
ZNF548-212ENST00000602086 PLEKHG3A1L390 1219 aa19.51■□□□□ 0.71
ZNF548-212ENST00000602086 RBM33Q96EV2 1170 aaKnown RBP19.51■□□□□ 0.71
ZNF548-212ENST00000602086 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
ZNF548-212ENST00000602086 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
ZNF548-212ENST00000602086 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
ZNF548-212ENST00000602086 MON2Q7Z3U7 1717 aa19.5■□□□□ 0.71
ZNF548-212ENST00000602086 MRS2Q9HD23 443 aa19.49■□□□□ 0.71
ZNF548-212ENST00000602086 ANKRD26Q9UPS8 1709 aa19.48■□□□□ 0.71
ZNF548-212ENST00000602086 TMEM94Q12767 1356 aa19.48■□□□□ 0.71
ZNF548-212ENST00000602086 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
ZNF548-212ENST00000602086 EDC4Q6P2E9 1401 aaKnown RBP19.47■□□□□ 0.71
ZNF548-212ENST00000602086 PHLPP1O60346 1717 aa19.45■□□□□ 0.7
ZNF548-212ENST00000602086 CCDC184Q52MB2 194 aa19.45■□□□□ 0.7
ZNF548-212ENST00000602086 KIF20BQ96Q89 1820 aa19.45■□□□□ 0.7
ZNF548-212ENST00000602086 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
ZNF548-212ENST00000602086 PPP2R1AP30153 589 aa19.43■□□□□ 0.7
ZNF548-212ENST00000602086 INSRP06213 1382 aa19.43■□□□□ 0.7
ZNF548-212ENST00000602086 DCCP43146 1447 aa19.42■□□□□ 0.7
ZNF548-212ENST00000602086 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms