RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 GOLGA6L3A6NEY3 463 aa23.71■■□□□ 1.39
ARHGEF1-221ENST00000600387 KIF1BO60333 1816 aa23.7■■□□□ 1.39
ARHGEF1-221ENST00000600387 KANK1Q14678 1352 aa23.7■■□□□ 1.38
ARHGEF1-221ENST00000600387 FSD2A1L4K1 749 aa23.7■■□□□ 1.38
ARHGEF1-221ENST00000600387 RLBP1P12271 317 aa23.7■■□□□ 1.38
ARHGEF1-221ENST00000600387 IFT172Q9UG01 1749 aa23.69■■□□□ 1.38
ARHGEF1-221ENST00000600387 MCM4P33991 863 aa23.69■■□□□ 1.38
ARHGEF1-221ENST00000600387 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
ARHGEF1-221ENST00000600387 CCDC27Q2M243 656 aa23.68■■□□□ 1.38
ARHGEF1-221ENST00000600387 VWDEQ8N2E2 1590 aa23.68■■□□□ 1.38
ARHGEF1-221ENST00000600387 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
ARHGEF1-221ENST00000600387 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
ARHGEF1-221ENST00000600387 TCP11L2Q8N4U5 519 aa23.67■■□□□ 1.38
ARHGEF1-221ENST00000600387 XRCC6P12956 609 aaKnown RBP eCLIP23.67■■□□□ 1.38
ARHGEF1-221ENST00000600387 NCBP3Q53F19 620 aaKnown RBP23.67■■□□□ 1.38
ARHGEF1-221ENST00000600387 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
ARHGEF1-221ENST00000600387 MORC1Q86VD1 984 aa23.66■■□□□ 1.38
ARHGEF1-221ENST00000600387 CHMP5Q9NZZ3 219 aa23.66■■□□□ 1.38
ARHGEF1-221ENST00000600387 USP32Q8NFA0 1604 aa23.65■■□□□ 1.38
ARHGEF1-221ENST00000600387 MVPQ14764 893 aaKnown RBP23.64■■□□□ 1.37
ARHGEF1-221ENST00000600387 NSD3Q9BZ95 1437 aa23.64■■□□□ 1.37
ARHGEF1-221ENST00000600387 MYH16Q9H6N6 1097 aa23.63■■□□□ 1.37
ARHGEF1-221ENST00000600387 TNNQ9UQP3 1299 aa23.63■■□□□ 1.37
ARHGEF1-221ENST00000600387 RRP7AQ9Y3A4 280 aaKnown RBP23.63■■□□□ 1.37
ARHGEF1-221ENST00000600387 CHD1O14646 1710 aa23.63■■□□□ 1.37
ARHGEF1-221ENST00000600387 C22orf23Q9BZE7 217 aa23.63■■□□□ 1.37
ARHGEF1-221ENST00000600387 ZCCHC11Q5TAX3 1644 aaKnown RBP23.61■■□□□ 1.37
ARHGEF1-221ENST00000600387 ZC3H13Q5T200 1668 aaKnown RBP23.61■■□□□ 1.37
ARHGEF1-221ENST00000600387 ARAP3Q8WWN8 1544 aa23.61■■□□□ 1.37
ARHGEF1-221ENST00000600387 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
ARHGEF1-221ENST00000600387 ADGRF5Q8IZF2 1346 aa23.6■■□□□ 1.37
ARHGEF1-221ENST00000600387 ZNF518AQ6AHZ1 1483 aa23.6■■□□□ 1.37
ARHGEF1-221ENST00000600387 NRXN1Q9ULB1 1477 aa23.6■■□□□ 1.37
ARHGEF1-221ENST00000600387 BCL2L13Q9BXK5 485 aa23.6■■□□□ 1.37
ARHGEF1-221ENST00000600387 ZKSCAN2Q63HK3 967 aa23.59■■□□□ 1.37
ARHGEF1-221ENST00000600387 CT47B1P0C2W7 299 aaPredicted RBP23.59■■□□□ 1.37
ARHGEF1-221ENST00000600387 CLCN1P35523 988 aa23.59■■□□□ 1.37
ARHGEF1-221ENST00000600387 CFAP53Q96M91 514 aa23.59■■□□□ 1.37
ARHGEF1-221ENST00000600387 TRAK2O60296 914 aa23.58■■□□□ 1.37
ARHGEF1-221ENST00000600387 MRE11P49959 708 aa23.58■■□□□ 1.36
ARHGEF1-221ENST00000600387 DZIP1LQ8IYY4 767 aaKnown RBP23.57■■□□□ 1.36
ARHGEF1-221ENST00000600387 SPRYD3Q8NCJ5 442 aa23.57■■□□□ 1.36
ARHGEF1-221ENST00000600387 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
ARHGEF1-221ENST00000600387 FTSJ3Q8IY81 847 aaKnown RBP23.57■■□□□ 1.36
ARHGEF1-221ENST00000600387 ISY1Q9ULR0 285 aaKnown RBP23.57■■□□□ 1.36
ARHGEF1-221ENST00000600387 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
ARHGEF1-221ENST00000600387 MROH2AA6NES4 1674 aa23.56■■□□□ 1.36
ARHGEF1-221ENST00000600387 DDX11L8A8MPP1 907 aa23.56■■□□□ 1.36
ARHGEF1-221ENST00000600387 HDAC1Q13547 482 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF1-221ENST00000600387 ADGRB2O60241 1585 aa23.55■■□□□ 1.36
ARHGEF1-221ENST00000600387 INO80Q9ULG1 1556 aaPredicted RBP23.55■■□□□ 1.36
ARHGEF1-221ENST00000600387 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
ARHGEF1-221ENST00000600387 GZF1Q9H116 711 aaPredicted RBP23.55■■□□□ 1.36
ARHGEF1-221ENST00000600387 PNNQ9H307 717 aaKnown RBP23.55■■□□□ 1.36
ARHGEF1-221ENST00000600387 UGGT1Q9NYU2 1555 aa23.55■■□□□ 1.36
ARHGEF1-221ENST00000600387 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
ARHGEF1-221ENST00000600387 HSCBQ8IWL3 235 aa23.54■■□□□ 1.36
ARHGEF1-221ENST00000600387 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
ARHGEF1-221ENST00000600387 AFAP1Q8N556 730 aa23.54■■□□□ 1.36
ARHGEF1-221ENST00000600387 ARXQ96QS3 562 aa23.54■■□□□ 1.36
ARHGEF1-221ENST00000600387 PANK2Q9BZ23 570 aa23.53■■□□□ 1.36
ARHGEF1-221ENST00000600387 MTHFSP49914 203 aa23.53■■□□□ 1.36
ARHGEF1-221ENST00000600387 NCOA3Q9Y6Q9 1424 aa23.51■■□□□ 1.35
ARHGEF1-221ENST00000600387 ERCC6L2Q5T890 1561 aa23.51■■□□□ 1.35
ARHGEF1-221ENST00000600387 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
ARHGEF1-221ENST00000600387 DDX19BQ9UMR2 479 aa23.5■■□□□ 1.35
ARHGEF1-221ENST00000600387 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
ARHGEF1-221ENST00000600387 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
ARHGEF1-221ENST00000600387 EFCAB6Q5THR3 1501 aa23.5■■□□□ 1.35
ARHGEF1-221ENST00000600387 NAP1L5Q96NT1 182 aaPredicted RBP23.49■■□□□ 1.35
ARHGEF1-221ENST00000600387 ZNF692Q9BU19 519 aaPredicted RBP23.49■■□□□ 1.35
ARHGEF1-221ENST00000600387 KIF3BO15066 747 aa23.48■■□□□ 1.35
ARHGEF1-221ENST00000600387 GRPEL1Q9HAV7 217 aa23.48■■□□□ 1.35
ARHGEF1-221ENST00000600387 NSD2O96028 1365 aa23.48■■□□□ 1.35
ARHGEF1-221ENST00000600387 SMC5Q8IY18 1101 aa23.47■■□□□ 1.35
ARHGEF1-221ENST00000600387 SNX21Q969T3 373 aa23.47■■□□□ 1.35
ARHGEF1-221ENST00000600387 ADGRB3O60242 1522 aa23.46■■□□□ 1.35
ARHGEF1-221ENST00000600387 DDIT3P35638 169 aa23.46■■□□□ 1.35
ARHGEF1-221ENST00000600387 GLIPR1L2Q4G1C9 344 aa23.46■■□□□ 1.35
ARHGEF1-221ENST00000600387 SMC4Q9NTJ3 1288 aa23.46■■□□□ 1.35
ARHGEF1-221ENST00000600387 RBM25P49756 843 aaKnown RBP23.45■■□□□ 1.35
ARHGEF1-221ENST00000600387 PPLO60437 1756 aa23.45■■□□□ 1.35
ARHGEF1-221ENST00000600387 NOS1P29475 1434 aa23.45■■□□□ 1.34
ARHGEF1-221ENST00000600387 U2AF1L5P0DN76 240 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF1-221ENST00000600387 TRIM27P14373 513 aa23.44■■□□□ 1.34
ARHGEF1-221ENST00000600387 U2AF1Q01081 240 aaKnown RBP eCLIP23.44■■□□□ 1.34
ARHGEF1-221ENST00000600387 CIZ1Q9ULV3 898 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF1-221ENST00000600387 FANCAO15360 1455 aa23.44■■□□□ 1.34
ARHGEF1-221ENST00000600387 ATF7IPQ6VMQ6 1270 aa23.43■■□□□ 1.34
ARHGEF1-221ENST00000600387 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
ARHGEF1-221ENST00000600387 PPRC1Q5VV67 1664 aaKnown RBP23.43■■□□□ 1.34
ARHGEF1-221ENST00000600387 PUS7Q96PZ0 661 aaKnown RBP23.43■■□□□ 1.34
ARHGEF1-221ENST00000600387 TRAK1Q9UPV9 953 aa23.43■■□□□ 1.34
ARHGEF1-221ENST00000600387 PTMSP20962 102 aa23.42■■□□□ 1.34
ARHGEF1-221ENST00000600387 ABCA9Q8IUA7 1624 aa23.42■■□□□ 1.34
ARHGEF1-221ENST00000600387 ADGRB1O14514 1584 aa23.41■■□□□ 1.34
ARHGEF1-221ENST00000600387 LMTK2Q8IWU2 1503 aa23.4■■□□□ 1.34
ARHGEF1-221ENST00000600387 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
ARHGEF1-221ENST00000600387 GBP4Q96PP9 640 aa23.4■■□□□ 1.34
ARHGEF1-221ENST00000600387 C14orf93Q9H972 538 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms