RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 AQRO60306 1485 aaKnown RBP eCLIP9.69□□□□□ -0.865e-7■■■■□ 21.9
FARP1-219ENST00000596580 TAOK2Q9UL54 1235 aa9.69□□□□□ -0.86
FARP1-219ENST00000596580 ANKRD45Q5TZF3 282 aa9.69□□□□□ -0.86
FARP1-219ENST00000596580 THOC2Q8NI27 1593 aaKnown RBP9.68□□□□□ -0.86
FARP1-219ENST00000596580 PDE4AP27815 886 aa9.68□□□□□ -0.86
FARP1-219ENST00000596580 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
FARP1-219ENST00000596580 IQGAP2Q13576 1575 aa9.68□□□□□ -0.86
FARP1-219ENST00000596580 ERCC4Q92889 916 aaPredicted RBP9.68□□□□□ -0.86
FARP1-219ENST00000596580 DCTN1Q14203 1278 aa9.68□□□□□ -0.86
FARP1-219ENST00000596580 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
FARP1-219ENST00000596580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.68□□□□□ -0.864e-7■■□□□ 13.2
FARP1-219ENST00000596580 ANKRD30BQ9BXX2 1392 aa9.68□□□□□ -0.86
FARP1-219ENST00000596580 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
FARP1-219ENST00000596580 C9orf84Q5VXU9 1444 aa9.67□□□□□ -0.86
FARP1-219ENST00000596580 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
FARP1-219ENST00000596580 RALYLQ86SE5 291 aaKnown RBP9.67□□□□□ -0.86
FARP1-219ENST00000596580 CCDC173Q0VFZ6 552 aa9.67□□□□□ -0.86
FARP1-219ENST00000596580 CAVIN1Q6NZI2 390 aaKnown RBP9.67□□□□□ -0.86
FARP1-219ENST00000596580 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
FARP1-219ENST00000596580 CTTNBP2Q8WZ74 1663 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 SLC3A2P08195 630 aaKnown RBP9.66□□□□□ -0.86
FARP1-219ENST00000596580 GNAI3P08754 354 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 CDC45O75419 566 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 LUC7LQ9NQ29 371 aaKnown RBP9.66□□□□□ -0.86
FARP1-219ENST00000596580 SYNJ1O43426 1573 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 CNTROBQ8N137 903 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 JMYQ8N9B5 988 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 IGF1RP08069 1367 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 RPGRIP1LQ68CZ1 1315 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 HSP90B2PQ58FF3 399 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 POGZQ7Z3K3 1410 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 RILPL2Q969X0 211 aa9.66□□□□□ -0.86
FARP1-219ENST00000596580 VPS53Q5VIR6 699 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 TRAK1Q9UPV9 953 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 FAM135AQ9P2D6 1515 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 CWC15Q9P013 229 aaKnown RBP9.65□□□□□ -0.86
FARP1-219ENST00000596580 SRCIN1Q9C0H9 1055 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 RUFY1Q96T51 708 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
FARP1-219ENST00000596580 KIAA1107Q9UPP5 1409 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 CCDC146Q8IYE0 955 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.86
FARP1-219ENST00000596580 RABEP1Q15276 862 aa9.65□□□□□ -0.87
FARP1-219ENST00000596580 ANKRD1Q15327 319 aa9.65□□□□□ -0.87
FARP1-219ENST00000596580 CCDC43Q96MW1 224 aaKnown RBP9.65□□□□□ -0.87
FARP1-219ENST00000596580 CTDP1Q9Y5B0 961 aaPredicted RBP9.65□□□□□ -0.87
FARP1-219ENST00000596580 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 PNISRQ8TF01 805 aaKnown RBP9.64□□□□□ -0.87
FARP1-219ENST00000596580 MCTP1Q6DN14 999 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 PES1O00541 588 aaKnown RBP9.64□□□□□ -0.87
FARP1-219ENST00000596580 PTPN23Q9H3S7 1636 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 GCC1Q96CN9 775 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 SMC3Q9UQE7 1217 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 MRE11P49959 708 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 RIPK4P57078 832 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 EVA1CP58658 441 aa9.64□□□□□ -0.87
FARP1-219ENST00000596580 ANO2Q9NQ90 1003 aa9.63□□□□□ -0.87
FARP1-219ENST00000596580 TROQ12816 1431 aaPredicted RBP9.63□□□□□ -0.87
FARP1-219ENST00000596580 CWC22Q9HCG8 908 aaKnown RBP9.63□□□□□ -0.87
FARP1-219ENST00000596580 TSHZ2Q9NRE2 1034 aa9.63□□□□□ -0.87
FARP1-219ENST00000596580 TXLNAP40222 546 aa9.63□□□□□ -0.87
FARP1-219ENST00000596580 OLFM4Q6UX06 510 aa9.63□□□□□ -0.87
FARP1-219ENST00000596580 EPRSP07814 1512 aaKnown RBP9.63□□□□□ -0.87
FARP1-219ENST00000596580 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
FARP1-219ENST00000596580 BICD2Q8TD16 824 aa9.62□□□□□ -0.87
FARP1-219ENST00000596580 PSME1Q06323 249 aa9.62□□□□□ -0.87
FARP1-219ENST00000596580 RAPGEF4Q8WZA2 1011 aa9.62□□□□□ -0.87
FARP1-219ENST00000596580 UNC13AQ9UPW8 1703 aa9.62□□□□□ -0.87
FARP1-219ENST00000596580 CALRP27797 417 aaKnown RBP9.62□□□□□ -0.87
FARP1-219ENST00000596580 CCDC30Q5VVM6 783 aa9.62□□□□□ -0.87
FARP1-219ENST00000596580 GNL3LQ9NVN8 582 aaKnown RBP9.62□□□□□ -0.87
FARP1-219ENST00000596580 CCDC9Q9Y3X0 531 aaKnown RBP9.62□□□□□ -0.87
FARP1-219ENST00000596580 EPS15P42566 896 aa9.62□□□□□ -0.87
FARP1-219ENST00000596580 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
FARP1-219ENST00000596580 EIF2AK4Q9P2K8 1649 aaKnown RBP9.62□□□□□ -0.87
FARP1-219ENST00000596580 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
FARP1-219ENST00000596580 UBTFL1P0CB47 393 aaPredicted RBP9.61□□□□□ -0.87
FARP1-219ENST00000596580 SMARCE1Q969G3 411 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 SNAPC4Q5SXM2 1469 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 IQCEQ6IPM2 695 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 C22orf23Q9BZE7 217 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 HOMER1Q86YM7 354 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 AEBP1Q8IUX7 1158 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.61□□□□□ -0.87
FARP1-219ENST00000596580 NFXL1Q6ZNB6 911 aa9.61□□□□□ -0.87
FARP1-219ENST00000596580 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
FARP1-219ENST00000596580 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
FARP1-219ENST00000596580 DACH1Q9UI36 760 aa9.6□□□□□ -0.87
FARP1-219ENST00000596580 TOPBP1Q92547 1522 aa9.6□□□□□ -0.87
FARP1-219ENST00000596580 MAGI1Q96QZ7 1491 aaPredicted RBP9.6□□□□□ -0.87
FARP1-219ENST00000596580 ATF3P18847 181 aa9.6□□□□□ -0.87
FARP1-219ENST00000596580 CAGE1Q8TC20 777 aa9.6□□□□□ -0.87
FARP1-219ENST00000596580 KINO60870 393 aaKnown RBP9.6□□□□□ -0.87
FARP1-219ENST00000596580 CREBRFQ8IUR6 639 aa9.6□□□□□ -0.87
FARP1-219ENST00000596580 PLEKHH1Q9ULM0 1364 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms