RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 SLIT2O94813 1529 aa18.98■□□□□ 0.63
ZNF558-202ENST00000593891 LAMC1P11047 1609 aa18.96■□□□□ 0.63
ZNF558-202ENST00000593891 KCNQ2O43526 872 aa18.96■□□□□ 0.63
ZNF558-202ENST00000593891 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
ZNF558-202ENST00000593891 DISP2A7MBM2 1401 aa18.95■□□□□ 0.62
ZNF558-202ENST00000593891 GIGYF1O75420 1035 aaPredicted RBP18.95■□□□□ 0.62
ZNF558-202ENST00000593891 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
ZNF558-202ENST00000593891 NBPF14Q5TI25 921 aa18.95■□□□□ 0.62
ZNF558-202ENST00000593891 NPHP3Q7Z494 1330 aa18.94■□□□□ 0.62
ZNF558-202ENST00000593891 CAMKK2Q96RR4 588 aa18.93■□□□□ 0.62
ZNF558-202ENST00000593891 TMEM131LA2VDJ0 1609 aa18.89■□□□□ 0.62
ZNF558-202ENST00000593891 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
ZNF558-202ENST00000593891 MARF1Q9Y4F3 1742 aaKnown RBP18.88■□□□□ 0.61
ZNF558-202ENST00000593891 CEP350Q5VT06 3117 aa18.87■□□□□ 0.61
ZNF558-202ENST00000593891 XRN1Q8IZH2 1706 aaKnown RBP18.87■□□□□ 0.61
ZNF558-202ENST00000593891 RGPD1P0DJD0 1748 aa18.86■□□□□ 0.61
ZNF558-202ENST00000593891 HAP1P54257 671 aaPredicted RBP18.86■□□□□ 0.61
ZNF558-202ENST00000593891 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
ZNF558-202ENST00000593891 FAM182BQ5T319 152 aa18.86■□□□□ 0.61
ZNF558-202ENST00000593891 MYOM3Q5VTT5 1437 aa18.85■□□□□ 0.61
ZNF558-202ENST00000593891 XPCQ01831 940 aaPredicted RBP18.85■□□□□ 0.61
ZNF558-202ENST00000593891 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
ZNF558-202ENST00000593891 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
ZNF558-202ENST00000593891 FOXO3O43524 673 aa18.84■□□□□ 0.61
ZNF558-202ENST00000593891 APBA3O96018 575 aa18.84■□□□□ 0.61
ZNF558-202ENST00000593891 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
ZNF558-202ENST00000593891 METP08581 1390 aa18.83■□□□□ 0.61
ZNF558-202ENST00000593891 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
ZNF558-202ENST00000593891 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
ZNF558-202ENST00000593891 TRIM37O94972 964 aa18.81■□□□□ 0.6
ZNF558-202ENST00000593891 PXDNQ92626 1479 aa18.8■□□□□ 0.6
ZNF558-202ENST00000593891 NALCNQ8IZF0 1738 aa18.79■□□□□ 0.6
ZNF558-202ENST00000593891 ADGRL2O95490 1459 aa18.78■□□□□ 0.6
ZNF558-202ENST00000593891 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
ZNF558-202ENST00000593891 FAM196AQ6ZSG2 479 aa18.78■□□□□ 0.6
ZNF558-202ENST00000593891 SPATA31A3Q5VYP0 1347 aa18.75■□□□□ 0.59
ZNF558-202ENST00000593891 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
ZNF558-202ENST00000593891 UTRNP46939 3433 aa18.72■□□□□ 0.59
ZNF558-202ENST00000593891 ANKRD30AQ9BXX3 1397 aa18.72■□□□□ 0.59
ZNF558-202ENST00000593891 USP32Q8NFA0 1604 aa18.72■□□□□ 0.59
ZNF558-202ENST00000593891 FAM83GA6ND36 823 aa18.72■□□□□ 0.59
ZNF558-202ENST00000593891 ABCC5O15440 1437 aa18.72■□□□□ 0.59
ZNF558-202ENST00000593891 SYT17Q9BSW7 474 aa18.71■□□□□ 0.59
ZNF558-202ENST00000593891 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
ZNF558-202ENST00000593891 CABLES1Q8TDN4 633 aa18.7■□□□□ 0.58
ZNF558-202ENST00000593891 PLEKHG5O94827 1062 aa18.69■□□□□ 0.58
ZNF558-202ENST00000593891 NRXN3Q9Y4C0 1643 aa18.68■□□□□ 0.58
ZNF558-202ENST00000593891 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
ZNF558-202ENST00000593891 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
ZNF558-202ENST00000593891 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
ZNF558-202ENST00000593891 CAPN15O75808 1086 aa18.67■□□□□ 0.58
ZNF558-202ENST00000593891 SLC34A2O95436 690 aa18.67■□□□□ 0.58
ZNF558-202ENST00000593891 ZNF326Q5BKZ1 582 aaKnown RBP18.67■□□□□ 0.58
ZNF558-202ENST00000593891 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
ZNF558-202ENST00000593891 HSPA6P17066 643 aa18.66■□□□□ 0.58
ZNF558-202ENST00000593891 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
ZNF558-202ENST00000593891 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
ZNF558-202ENST00000593891 CHD4Q14839 1912 aa18.64■□□□□ 0.58
ZNF558-202ENST00000593891 SPATA31A5Q5VU36 1347 aa18.64■□□□□ 0.57
ZNF558-202ENST00000593891 SPATA31A7Q8IWB4 1347 aa18.64■□□□□ 0.57
ZNF558-202ENST00000593891 ZBTB7AO95365 584 aa18.63■□□□□ 0.57
ZNF558-202ENST00000593891 NRKQ7Z2Y5 1582 aa18.63■□□□□ 0.57
ZNF558-202ENST00000593891 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
ZNF558-202ENST00000593891 PTGER2P43116 358 aa18.62■□□□□ 0.57
ZNF558-202ENST00000593891 PSME1Q06323 249 aa18.62■□□□□ 0.57
ZNF558-202ENST00000593891 GPR162Q16538 588 aa18.62■□□□□ 0.57
ZNF558-202ENST00000593891 CCDC144AA2RUR9 1427 aa18.62■□□□□ 0.57
ZNF558-202ENST00000593891 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
ZNF558-202ENST00000593891 DAPK1P53355 1430 aa18.61■□□□□ 0.57
ZNF558-202ENST00000593891 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
ZNF558-202ENST00000593891 ATF5Q9Y2D1 282 aaPredicted RBP18.61■□□□□ 0.57
ZNF558-202ENST00000593891 NUP188Q5SRE5 1749 aa18.6■□□□□ 0.57
ZNF558-202ENST00000593891 RREB1Q92766 1687 aa18.6■□□□□ 0.57
ZNF558-202ENST00000593891 NUTM2FA1L443 756 aa18.6■□□□□ 0.57
ZNF558-202ENST00000593891 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
ZNF558-202ENST00000593891 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
ZNF558-202ENST00000593891 PRELPP51888 382 aa18.56■□□□□ 0.56
ZNF558-202ENST00000593891 PCDH10Q9P2E7 1040 aa18.56■□□□□ 0.56
ZNF558-202ENST00000593891 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
ZNF558-202ENST00000593891 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
ZNF558-202ENST00000593891 PDGFDQ9GZP0 370 aaPredicted RBP18.54■□□□□ 0.56
ZNF558-202ENST00000593891 DLC1Q96QB1 1528 aa18.54■□□□□ 0.56
ZNF558-202ENST00000593891 CDC42BPGQ6DT37 1551 aa18.53■□□□□ 0.56
ZNF558-202ENST00000593891 MYOM1P52179 1685 aa18.53■□□□□ 0.56
ZNF558-202ENST00000593891 THSD7AQ9UPZ6 1657 aa18.53■□□□□ 0.56
ZNF558-202ENST00000593891 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
ZNF558-202ENST00000593891 IQGAP3Q86VI3 1631 aa18.52■□□□□ 0.56
ZNF558-202ENST00000593891 ANKRD50Q9ULJ7 1429 aa18.52■□□□□ 0.56
ZNF558-202ENST00000593891 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
ZNF558-202ENST00000593891 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
ZNF558-202ENST00000593891 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
ZNF558-202ENST00000593891 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
ZNF558-202ENST00000593891 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
ZNF558-202ENST00000593891 COL13A1Q5TAT6 717 aaPredicted RBP18.49■□□□□ 0.55
ZNF558-202ENST00000593891 ARXQ96QS3 562 aa18.49■□□□□ 0.55
ZNF558-202ENST00000593891 SBNO1A3KN83 1393 aa18.49■□□□□ 0.55
ZNF558-202ENST00000593891 NAIPQ13075 1403 aa18.49■□□□□ 0.55
ZNF558-202ENST00000593891 TNS4Q8IZW8 715 aa18.48■□□□□ 0.55
ZNF558-202ENST00000593891 MTFR1LQ9H019 292 aa18.48■□□□□ 0.55
ZNF558-202ENST00000593891 NRAPQ86VF7 1730 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms