RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
HDAC5-212ENST00000593013 TBX22Q9Y458 520 aa25.35■■□□□ 1.65
HDAC5-212ENST00000593013 METP08581 1390 aa25.35■■□□□ 1.65
HDAC5-212ENST00000593013 DIP2AQ14689 1571 aa25.35■■□□□ 1.65
HDAC5-212ENST00000593013 FKBP8Q14318 412 aa25.33■■□□□ 1.65
HDAC5-212ENST00000593013 INSRP06213 1382 aa25.3■■□□□ 1.64
HDAC5-212ENST00000593013 CNGB1Q14028 1251 aaPredicted RBP25.3■■□□□ 1.64
HDAC5-212ENST00000593013 YTHDC2Q9H6S0 1430 aaKnown RBP25.3■■□□□ 1.64
HDAC5-212ENST00000593013 QRICH2Q9H0J4 1663 aa25.29■■□□□ 1.64
HDAC5-212ENST00000593013 NPC1L1Q9UHC9 1359 aa25.28■■□□□ 1.64
HDAC5-212ENST00000593013 SMG6Q86US8 1419 aaKnown RBP25.26■■□□□ 1.63
HDAC5-212ENST00000593013 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
HDAC5-212ENST00000593013 PIK3R4Q99570 1358 aa25.26■■□□□ 1.63
HDAC5-212ENST00000593013 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
HDAC5-212ENST00000593013 ARHGEF28Q8N1W1 1705 aaKnown RBP25.25■■□□□ 1.63
HDAC5-212ENST00000593013 PELP1Q8IZL8 1130 aaKnown RBP25.24■■□□□ 1.63
HDAC5-212ENST00000593013 TRAK1Q9UPV9 953 aa25.24■■□□□ 1.63
HDAC5-212ENST00000593013 DMRT2Q9Y5R5 561 aa25.24■■□□□ 1.63
HDAC5-212ENST00000593013 STK26Q9P289 416 aa25.23■■□□□ 1.63
HDAC5-212ENST00000593013 TECPR2O15040 1411 aa25.22■■□□□ 1.63
HDAC5-212ENST00000593013 CENPJQ9HC77 1338 aaPredicted RBP25.22■■□□□ 1.63
HDAC5-212ENST00000593013 CHD2O14647 1828 aaKnown RBP25.22■■□□□ 1.63
HDAC5-212ENST00000593013 KNDC1Q76NI1 1749 aa25.21■■□□□ 1.63
HDAC5-212ENST00000593013 AMER1Q5JTC6 1135 aaPredicted RBP25.21■■□□□ 1.63
HDAC5-212ENST00000593013 DLC1Q96QB1 1528 aa25.21■■□□□ 1.63
HDAC5-212ENST00000593013 CC2D1BQ5T0F9 858 aaKnown RBP25.2■■□□□ 1.63
HDAC5-212ENST00000593013 KNSTRNQ9Y448 316 aa25.2■■□□□ 1.62
HDAC5-212ENST00000593013 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.62
HDAC5-212ENST00000593013 AMOTL2Q9Y2J4 779 aa25.18■■□□□ 1.62
HDAC5-212ENST00000593013 BLMP54132 1417 aaPredicted RBP25.18■■□□□ 1.62
HDAC5-212ENST00000593013 CPS1P31327 1500 aa25.18■■□□□ 1.62
HDAC5-212ENST00000593013 ERICH6BQ5W0A0 696 aa25.17■■□□□ 1.62
HDAC5-212ENST00000593013 SIRT1Q96EB6 747 aa25.17■■□□□ 1.62
HDAC5-212ENST00000593013 ROBO2Q9HCK4 1378 aa25.15■■□□□ 1.62
HDAC5-212ENST00000593013 FAM135BQ49AJ0 1406 aa25.14■■□□□ 1.62
HDAC5-212ENST00000593013 PTCH1Q13635 1447 aa25.14■■□□□ 1.61
HDAC5-212ENST00000593013 KCNA6P17658 529 aa25.13■■□□□ 1.61
HDAC5-212ENST00000593013 NWD1Q149M9 1564 aa25.13■■□□□ 1.61
HDAC5-212ENST00000593013 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
HDAC5-212ENST00000593013 NUDCQ9Y266 331 aa25.13■■□□□ 1.61
HDAC5-212ENST00000593013 USP32Q8NFA0 1604 aa25.12■■□□□ 1.61
HDAC5-212ENST00000593013 WAPLQ7Z5K2 1190 aa25.12■■□□□ 1.61
HDAC5-212ENST00000593013 PUS7Q96PZ0 661 aaKnown RBP25.12■■□□□ 1.61
HDAC5-212ENST00000593013 PLEKHH1Q9ULM0 1364 aa25.11■■□□□ 1.61
HDAC5-212ENST00000593013 STRCP1A6NGW2 1772 aa25.1■■□□□ 1.61
HDAC5-212ENST00000593013 PPP2R1AP30153 589 aa25.09■■□□□ 1.61
HDAC5-212ENST00000593013 POGKQ9P215 609 aa25.09■■□□□ 1.61
HDAC5-212ENST00000593013 TULP4Q9NRJ4 1543 aa25.08■■□□□ 1.61
HDAC5-212ENST00000593013 ZNF335Q9H4Z2 1342 aaPredicted RBP25.07■■□□□ 1.6
HDAC5-212ENST00000593013 SAFB2Q14151 953 aaKnown RBP eCLIP25.06■■□□□ 1.6
HDAC5-212ENST00000593013 RNF123Q5XPI4 1314 aa25.05■■□□□ 1.6
HDAC5-212ENST00000593013 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
HDAC5-212ENST00000593013 CARD14Q9BXL6 1004 aa25.03■■□□□ 1.6
HDAC5-212ENST00000593013 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.03■■□□□ 1.6
HDAC5-212ENST00000593013 PDE3BQ13370 1112 aa25.01■■□□□ 1.59
HDAC5-212ENST00000593013 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
HDAC5-212ENST00000593013 LTBP4Q8N2S1 1624 aa25.01■■□□□ 1.59
HDAC5-212ENST00000593013 EVC2Q86UK5 1308 aa24.99■■□□□ 1.59
HDAC5-212ENST00000593013 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
HDAC5-212ENST00000593013 NSD3Q9BZ95 1437 aa24.97■■□□□ 1.59
HDAC5-212ENST00000593013 PROSER2Q86WR7 435 aaPredicted RBP24.96■■□□□ 1.59
HDAC5-212ENST00000593013 NINLQ9Y2I6 1382 aa24.95■■□□□ 1.59
HDAC5-212ENST00000593013 RBM33Q96EV2 1170 aaKnown RBP24.95■■□□□ 1.59
HDAC5-212ENST00000593013 IRX6P78412 446 aaPredicted RBP24.94■■□□□ 1.58
HDAC5-212ENST00000593013 NALCNQ8IZF0 1738 aa24.93■■□□□ 1.58
HDAC5-212ENST00000593013 PPP4R2Q9NY27 417 aa24.93■■□□□ 1.58
HDAC5-212ENST00000593013 ANKRD36BQ8N2N9 1353 aa24.93■■□□□ 1.58
HDAC5-212ENST00000593013 LRRC7Q96NW7 1537 aa24.92■■□□□ 1.58
HDAC5-212ENST00000593013 WASLO00401 505 aaPredicted RBP24.92■■□□□ 1.58
HDAC5-212ENST00000593013 TMEM94Q12767 1356 aa24.91■■□□□ 1.58
HDAC5-212ENST00000593013 ADGRL3Q9HAR2 1447 aa24.91■■□□□ 1.58
HDAC5-212ENST00000593013 NCOA3Q9Y6Q9 1424 aa24.91■■□□□ 1.58
HDAC5-212ENST00000593013 XIRP1Q702N8 1843 aaKnown RBP24.91■■□□□ 1.58
HDAC5-212ENST00000593013 CDK19Q9BWU1 502 aa24.91■■□□□ 1.58
HDAC5-212ENST00000593013 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
HDAC5-212ENST00000593013 ADAMTS8Q9UP79 889 aa24.91■■□□□ 1.58
HDAC5-212ENST00000593013 WDR43Q15061 677 aaKnown RBP eCLIP24.89■■□□□ 1.58
HDAC5-212ENST00000593013 NSD2O96028 1365 aa24.89■■□□□ 1.58
HDAC5-212ENST00000593013 POLR3AO14802 1390 aaPredicted RBP24.89■■□□□ 1.57
HDAC5-212ENST00000593013 CABP2Q9NPB3 220 aa24.88■■□□□ 1.57
HDAC5-212ENST00000593013 TSHZ2Q9NRE2 1034 aa24.86■■□□□ 1.57
HDAC5-212ENST00000593013 CDC42BPGQ6DT37 1551 aa24.86■■□□□ 1.57
HDAC5-212ENST00000593013 ATAD2Q6PL18 1390 aa24.86■■□□□ 1.57
HDAC5-212ENST00000593013 SENP3-EIF4A1A0A087X0R7 540 aa24.86■■□□□ 1.57
HDAC5-212ENST00000593013 SHPRHQ149N8 1683 aa24.86■■□□□ 1.57
HDAC5-212ENST00000593013 SRPK2P78362 688 aaKnown RBP24.85■■□□□ 1.57
HDAC5-212ENST00000593013 C19orf44Q9H6X5 657 aa24.84■■□□□ 1.57
HDAC5-212ENST00000593013 ANKRD26Q9UPS8 1709 aa24.84■■□□□ 1.57
HDAC5-212ENST00000593013 CGNL1Q0VF96 1302 aa24.84■■□□□ 1.57
HDAC5-212ENST00000593013 C14orf37Q86TY3 774 aa24.83■■□□□ 1.57
HDAC5-212ENST00000593013 FMN2Q9NZ56 1722 aa24.82■■□□□ 1.56
HDAC5-212ENST00000593013 ATP7BP35670 1465 aa24.81■■□□□ 1.56
HDAC5-212ENST00000593013 ZNF521Q96K83 1311 aa24.81■■□□□ 1.56
HDAC5-212ENST00000593013 PRR36Q9H6K5 1346 aa24.81■■□□□ 1.56
HDAC5-212ENST00000593013 DCCP43146 1447 aa24.79■■□□□ 1.56
HDAC5-212ENST00000593013 MORC1Q86VD1 984 aa24.79■■□□□ 1.56
HDAC5-212ENST00000593013 NUDT16Q96DE0 195 aaKnown RBP24.79■■□□□ 1.56
HDAC5-212ENST00000593013 IQSEC2Q5JU85 1478 aa24.78■■□□□ 1.56
HDAC5-212ENST00000593013 CD163L1Q9NR16 1453 aa24.78■■□□□ 1.56
HDAC5-212ENST00000593013 A0A1W2PP64 1363 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms