RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PTPRUQ92729 1446 aa17.21■□□□□ 0.35
DDX39A-219ENST00000592927 LRP5O75197 1615 aa17.21■□□□□ 0.35
DDX39A-219ENST00000592927 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-219ENST00000592927 ZNF326Q5BKZ1 582 aaKnown RBP17.21■□□□□ 0.35
DDX39A-219ENST00000592927 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
DDX39A-219ENST00000592927 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
DDX39A-219ENST00000592927 GJD4Q96KN9 370 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-219ENST00000592927 RGL3Q3MIN7 710 aa17.18■□□□□ 0.34
DDX39A-219ENST00000592927 PTCH1Q13635 1447 aa17.18■□□□□ 0.34
DDX39A-219ENST00000592927 KIF1BO60333 1816 aa17.17■□□□□ 0.34
DDX39A-219ENST00000592927 YY1P25490 414 aa17.16■□□□□ 0.34
DDX39A-219ENST00000592927 SPATA31E1Q6ZUB1 1445 aa17.15■□□□□ 0.34
DDX39A-219ENST00000592927 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
DDX39A-219ENST00000592927 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
DDX39A-219ENST00000592927 BCL9LQ86UU0 1499 aa17.15■□□□□ 0.34
DDX39A-219ENST00000592927 RPGRIP1LQ68CZ1 1315 aa17.15■□□□□ 0.34
DDX39A-219ENST00000592927 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-219ENST00000592927 MYO5BQ9ULV0 1848 aa17.13■□□□□ 0.33
DDX39A-219ENST00000592927 ORAI2Q96SN7 254 aa17.11■□□□□ 0.33
DDX39A-219ENST00000592927 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-219ENST00000592927 TIMELESSQ9UNS1 1208 aa17.09■□□□□ 0.33
DDX39A-219ENST00000592927 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
DDX39A-219ENST00000592927 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
DDX39A-219ENST00000592927 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
DDX39A-219ENST00000592927 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
DDX39A-219ENST00000592927 UNC5CLQ8IV45 518 aa17.06■□□□□ 0.32
DDX39A-219ENST00000592927 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
DDX39A-219ENST00000592927 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
DDX39A-219ENST00000592927 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
DDX39A-219ENST00000592927 STAC3Q96MF2 364 aa17.05■□□□□ 0.32
DDX39A-219ENST00000592927 METP08581 1390 aa17.04■□□□□ 0.32
DDX39A-219ENST00000592927 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
DDX39A-219ENST00000592927 BAG6P46379 1132 aa17.04■□□□□ 0.32
DDX39A-219ENST00000592927 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
DDX39A-219ENST00000592927 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
DDX39A-219ENST00000592927 MYOM2P54296 1465 aa17.04■□□□□ 0.32
DDX39A-219ENST00000592927 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
DDX39A-219ENST00000592927 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
DDX39A-219ENST00000592927 XRN1Q8IZH2 1706 aaKnown RBP17.03■□□□□ 0.32
DDX39A-219ENST00000592927 PPLO60437 1756 aa17.02■□□□□ 0.32
DDX39A-219ENST00000592927 GLI3P10071 1580 aa17.01■□□□□ 0.31
DDX39A-219ENST00000592927 LAMC1P11047 1609 aa17■□□□□ 0.31
DDX39A-219ENST00000592927 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
DDX39A-219ENST00000592927 IFT172Q9UG01 1749 aa17■□□□□ 0.31
DDX39A-219ENST00000592927 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-219ENST00000592927 EN1Q05925 392 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-219ENST00000592927 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-219ENST00000592927 NRXN1Q9ULB1 1477 aa16.97■□□□□ 0.31
DDX39A-219ENST00000592927 PIK3C2GO75747 1445 aa16.96■□□□□ 0.31
DDX39A-219ENST00000592927 SLIT2O94813 1529 aa16.96■□□□□ 0.31
DDX39A-219ENST00000592927 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.31
DDX39A-219ENST00000592927 ONECUT3O60422 494 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-219ENST00000592927 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.3
DDX39A-219ENST00000592927 ESCO1Q5FWF5 840 aa16.95■□□□□ 0.3
DDX39A-219ENST00000592927 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
DDX39A-219ENST00000592927 NRXN3Q9Y4C0 1643 aa16.95■□□□□ 0.3
DDX39A-219ENST00000592927 VPS72Q15906 364 aa16.94■□□□□ 0.3
DDX39A-219ENST00000592927 C14orf93Q9H972 538 aaKnown RBP16.94■□□□□ 0.3
DDX39A-219ENST00000592927 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
DDX39A-219ENST00000592927 FOXO3O43524 673 aa16.93■□□□□ 0.3
DDX39A-219ENST00000592927 CFAP70Q5T0N1 1121 aa16.93■□□□□ 0.3
DDX39A-219ENST00000592927 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
DDX39A-219ENST00000592927 A0A0G2JS52 829 aa16.91■□□□□ 0.3
DDX39A-219ENST00000592927 MYT1Q01538 1121 aa16.91■□□□□ 0.3
DDX39A-219ENST00000592927 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.9■□□□□ 0.3
DDX39A-219ENST00000592927 SENP3-EIF4A1A0A087X0R7 540 aa16.9■□□□□ 0.3
DDX39A-219ENST00000592927 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
DDX39A-219ENST00000592927 PXDNQ92626 1479 aa16.9■□□□□ 0.3
DDX39A-219ENST00000592927 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
DDX39A-219ENST00000592927 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.29
DDX39A-219ENST00000592927 TMEM132EQ6IEE7 984 aa16.89■□□□□ 0.29
DDX39A-219ENST00000592927 MARF1Q9Y4F3 1742 aaKnown RBP16.88■□□□□ 0.29
DDX39A-219ENST00000592927 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
DDX39A-219ENST00000592927 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
DDX39A-219ENST00000592927 STK26Q9P289 416 aa16.86■□□□□ 0.29
DDX39A-219ENST00000592927 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-219ENST00000592927 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
DDX39A-219ENST00000592927 LRPPRCP42704 1394 aaKnown RBP16.85■□□□□ 0.29
DDX39A-219ENST00000592927 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
DDX39A-219ENST00000592927 SPATA31A3Q5VYP0 1347 aa16.84■□□□□ 0.29
DDX39A-219ENST00000592927 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
DDX39A-219ENST00000592927 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
DDX39A-219ENST00000592927 ZNF784Q8NCA9 323 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-219ENST00000592927 YTHDC2Q9H6S0 1430 aaKnown RBP16.83■□□□□ 0.28
DDX39A-219ENST00000592927 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-219ENST00000592927 ROCK2O75116 1388 aaKnown RBP16.82■□□□□ 0.28
DDX39A-219ENST00000592927 CABLES1Q8TDN4 633 aa16.82■□□□□ 0.28
DDX39A-219ENST00000592927 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
DDX39A-219ENST00000592927 KIAA1210Q9ULL0 1709 aa16.82■□□□□ 0.28
DDX39A-219ENST00000592927 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
DDX39A-219ENST00000592927 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
DDX39A-219ENST00000592927 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
DDX39A-219ENST00000592927 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
DDX39A-219ENST00000592927 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
DDX39A-219ENST00000592927 TECPR2O15040 1411 aa16.79■□□□□ 0.28
DDX39A-219ENST00000592927 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
DDX39A-219ENST00000592927 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
DDX39A-219ENST00000592927 C1QTNF8P60827 252 aa16.78■□□□□ 0.28
DDX39A-219ENST00000592927 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
DDX39A-219ENST00000592927 SIRT1Q96EB6 747 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms