RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 PARD3Q8TEW0 1356 aa14.4□□□□□ -0.1
LINC01539-205ENST00000591974 NINLQ9Y2I6 1382 aa14.4□□□□□ -0.1
LINC01539-205ENST00000591974 ATAD2Q6PL18 1390 aa14.4□□□□□ -0.1
LINC01539-205ENST00000591974 XRN1Q8IZH2 1706 aaKnown RBP14.39□□□□□ -0.11
LINC01539-205ENST00000591974 NPC1L1Q9UHC9 1359 aa14.39□□□□□ -0.11
LINC01539-205ENST00000591974 MINK1Q8N4C8 1332 aaPredicted RBP14.39□□□□□ -0.11
LINC01539-205ENST00000591974 CENPBP07199 599 aaPredicted RBP14.39□□□□□ -0.11
LINC01539-205ENST00000591974 ANKLE2Q86XL3 938 aa14.39□□□□□ -0.11
LINC01539-205ENST00000591974 KNSTRNQ9Y448 316 aa14.39□□□□□ -0.11
LINC01539-205ENST00000591974 USP32Q8NFA0 1604 aa14.38□□□□□ -0.11
LINC01539-205ENST00000591974 PIK3R4Q99570 1358 aa14.38□□□□□ -0.11
LINC01539-205ENST00000591974 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
LINC01539-205ENST00000591974 ADGRB2O60241 1585 aa14.38□□□□□ -0.11
LINC01539-205ENST00000591974 PTCH1Q13635 1447 aa14.38□□□□□ -0.11
LINC01539-205ENST00000591974 PTPRUQ92729 1446 aa14.38□□□□□ -0.11
LINC01539-205ENST00000591974 SLC26A8Q96RN1 970 aa14.38□□□□□ -0.11
LINC01539-205ENST00000591974 MYBBP1AQ9BQG0 1328 aaKnown RBP14.37□□□□□ -0.11
LINC01539-205ENST00000591974 WAPLQ7Z5K2 1190 aa14.37□□□□□ -0.11
LINC01539-205ENST00000591974 CHD2O14647 1828 aaKnown RBP14.37□□□□□ -0.11
LINC01539-205ENST00000591974 ROBO2Q9HCK4 1378 aa14.36□□□□□ -0.11
LINC01539-205ENST00000591974 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
LINC01539-205ENST00000591974 AMER1Q5JTC6 1135 aaPredicted RBP14.35□□□□□ -0.11
LINC01539-205ENST00000591974 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
LINC01539-205ENST00000591974 ANKRD36BQ8N2N9 1353 aa14.35□□□□□ -0.11
LINC01539-205ENST00000591974 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
LINC01539-205ENST00000591974 MRS2Q9HD23 443 aa14.35□□□□□ -0.11
LINC01539-205ENST00000591974 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
LINC01539-205ENST00000591974 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
LINC01539-205ENST00000591974 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
LINC01539-205ENST00000591974 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.11
LINC01539-205ENST00000591974 CCDC184Q52MB2 194 aa14.33□□□□□ -0.11
LINC01539-205ENST00000591974 CDK19Q9BWU1 502 aa14.33□□□□□ -0.11
LINC01539-205ENST00000591974 CC2D1BQ5T0F9 858 aaKnown RBP14.33□□□□□ -0.12
LINC01539-205ENST00000591974 NPHP4O75161 1426 aaPredicted RBP14.32□□□□□ -0.12
LINC01539-205ENST00000591974 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
LINC01539-205ENST00000591974 CARD14Q9BXL6 1004 aa14.32□□□□□ -0.12
LINC01539-205ENST00000591974 AMOTL2Q9Y2J4 779 aa14.32□□□□□ -0.12
LINC01539-205ENST00000591974 WASLO00401 505 aaPredicted RBP14.31□□□□□ -0.12
LINC01539-205ENST00000591974 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
LINC01539-205ENST00000591974 ATP7BP35670 1465 aa14.3□□□□□ -0.12
LINC01539-205ENST00000591974 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
LINC01539-205ENST00000591974 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
LINC01539-205ENST00000591974 TOPAZ1Q8N9V7 1692 aa14.29□□□□□ -0.12
LINC01539-205ENST00000591974 ANKRD26Q9UPS8 1709 aa14.29□□□□□ -0.12
LINC01539-205ENST00000591974 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
LINC01539-205ENST00000591974 NSD2O96028 1365 aa14.28□□□□□ -0.12
LINC01539-205ENST00000591974 KDM4FA0A1W2PPD8 638 aa14.28□□□□□ -0.12
LINC01539-205ENST00000591974 ITSN1Q15811 1721 aa14.28□□□□□ -0.12
LINC01539-205ENST00000591974 AKAP12Q02952 1782 aa14.28□□□□□ -0.12
LINC01539-205ENST00000591974 NWD1Q149M9 1564 aa14.27□□□□□ -0.12
LINC01539-205ENST00000591974 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
LINC01539-205ENST00000591974 KIF20BQ96Q89 1820 aa14.27□□□□□ -0.12
LINC01539-205ENST00000591974 MON2Q7Z3U7 1717 aa14.26□□□□□ -0.13
LINC01539-205ENST00000591974 CDC42BPGQ6DT37 1551 aa14.26□□□□□ -0.13
LINC01539-205ENST00000591974 PPIP5K1Q6PFW1 1433 aa14.26□□□□□ -0.13
LINC01539-205ENST00000591974 KCNA6P17658 529 aa14.25□□□□□ -0.13
LINC01539-205ENST00000591974 HDGFL2Q7Z4V5 671 aaPredicted RBP14.25□□□□□ -0.13
LINC01539-205ENST00000591974 FAM9BQ8IZU0 186 aa14.25□□□□□ -0.13
LINC01539-205ENST00000591974 PNISRQ8TF01 805 aaKnown RBP14.25□□□□□ -0.13
LINC01539-205ENST00000591974 CABP1Q9NZU7 370 aa14.25□□□□□ -0.13
LINC01539-205ENST00000591974 NCKAP5LQ9HCH0 1330 aa14.25□□□□□ -0.13
LINC01539-205ENST00000591974 NALCNQ8IZF0 1738 aa14.24□□□□□ -0.13
LINC01539-205ENST00000591974 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
LINC01539-205ENST00000591974 NUDT16Q96DE0 195 aaKnown RBP14.24□□□□□ -0.13
LINC01539-205ENST00000591974 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
LINC01539-205ENST00000591974 CPSF1Q10570 1443 aaKnown RBP14.24□□□□□ -0.13
LINC01539-205ENST00000591974 FMN2Q9NZ56 1722 aa14.23□□□□□ -0.13
LINC01539-205ENST00000591974 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
LINC01539-205ENST00000591974 RGPD8O14715 1765 aaPredicted RBP14.22□□□□□ -0.13
LINC01539-205ENST00000591974 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
LINC01539-205ENST00000591974 EDC4Q6P2E9 1401 aaKnown RBP14.21□□□□□ -0.14
LINC01539-205ENST00000591974 HNRNPUQ00839 825 aaKnown RBP eCLIP14.21□□□□□ -0.14
LINC01539-205ENST00000591974 MORC1Q86VD1 984 aa14.21□□□□□ -0.14
LINC01539-205ENST00000591974 NKTRP30414 1462 aaKnown RBP14.2□□□□□ -0.14
LINC01539-205ENST00000591974 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
LINC01539-205ENST00000591974 INSRP06213 1382 aa14.2□□□□□ -0.14
LINC01539-205ENST00000591974 NRKQ7Z2Y5 1582 aa14.19□□□□□ -0.14
LINC01539-205ENST00000591974 STRCQ7RTU9 1775 aa14.19□□□□□ -0.14
LINC01539-205ENST00000591974 ADGRL3Q9HAR2 1447 aa14.18□□□□□ -0.14
LINC01539-205ENST00000591974 PLEKHG3A1L390 1219 aa14.18□□□□□ -0.14
LINC01539-205ENST00000591974 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
LINC01539-205ENST00000591974 FYB1O15117 783 aa14.16□□□□□ -0.14
LINC01539-205ENST00000591974 POLR3AO14802 1390 aaPredicted RBP14.16□□□□□ -0.14
LINC01539-205ENST00000591974 STRCP1A6NGW2 1772 aa14.16□□□□□ -0.14
LINC01539-205ENST00000591974 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
LINC01539-205ENST00000591974 HSPA2P54652 639 aa14.15□□□□□ -0.14
LINC01539-205ENST00000591974 BLMP54132 1417 aaPredicted RBP14.14□□□□□ -0.15
LINC01539-205ENST00000591974 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
LINC01539-205ENST00000591974 ACEP12821 1306 aa14.13□□□□□ -0.15
LINC01539-205ENST00000591974 USP6P35125 1406 aa14.13□□□□□ -0.15
LINC01539-205ENST00000591974 MAP2P11137 1827 aaKnown RBP14.13□□□□□ -0.15
LINC01539-205ENST00000591974 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
LINC01539-205ENST00000591974 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
LINC01539-205ENST00000591974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
LINC01539-205ENST00000591974 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
LINC01539-205ENST00000591974 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
LINC01539-205ENST00000591974 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
LINC01539-205ENST00000591974 WDR43Q15061 677 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC01539-205ENST00000591974 SSH2Q76I76 1423 aa14.1□□□□□ -0.15
LINC01539-205ENST00000591974 PROSER2Q86WR7 435 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms