RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 ANKRD30AQ9BXX3 1397 aa10.22□□□□□ -0.77
DNMT1-222ENST00000590619 DCAF8L1A6NGE4 600 aa10.21□□□□□ -0.77
DNMT1-222ENST00000590619 C1QTNF8P60827 252 aa10.21□□□□□ -0.77
DNMT1-222ENST00000590619 CAMKK2Q96RR4 588 aa10.21□□□□□ -0.77
DNMT1-222ENST00000590619 CCDC9Q9Y3X0 531 aaKnown RBP10.21□□□□□ -0.77
DNMT1-222ENST00000590619 NPHP3Q7Z494 1330 aa10.21□□□□□ -0.78
DNMT1-222ENST00000590619 UNC13BO14795 1591 aa10.21□□□□□ -0.78
DNMT1-222ENST00000590619 LAMC1P11047 1609 aa10.2□□□□□ -0.78
DNMT1-222ENST00000590619 BRWD3Q6RI45 1802 aa10.2□□□□□ -0.78
DNMT1-222ENST00000590619 COL22A1Q8NFW1 1626 aaPredicted RBP10.19□□□□□ -0.78
DNMT1-222ENST00000590619 DAPK1P53355 1430 aa10.19□□□□□ -0.78
DNMT1-222ENST00000590619 XRN1Q8IZH2 1706 aaKnown RBP10.19□□□□□ -0.78
DNMT1-222ENST00000590619 GCC2Q8IWJ2 1684 aa10.18□□□□□ -0.78
DNMT1-222ENST00000590619 FAM83GA6ND36 823 aa10.18□□□□□ -0.78
DNMT1-222ENST00000590619 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
DNMT1-222ENST00000590619 A0A0G2JS52 829 aa10.17□□□□□ -0.78
DNMT1-222ENST00000590619 MYT1Q01538 1121 aa10.17□□□□□ -0.78
DNMT1-222ENST00000590619 ZNF326Q5BKZ1 582 aaKnown RBP10.17□□□□□ -0.78
DNMT1-222ENST00000590619 CABLES1Q8TDN4 633 aa10.17□□□□□ -0.78
DNMT1-222ENST00000590619 ROBO2Q9HCK4 1378 aa10.16□□□□□ -0.78
DNMT1-222ENST00000590619 SPATA31A3Q5VYP0 1347 aa10.16□□□□□ -0.78
DNMT1-222ENST00000590619 SPON1Q9HCB6 807 aa10.16□□□□□ -0.78
DNMT1-222ENST00000590619 PPP1R1BQ9UD71 204 aaPredicted RBP10.16□□□□□ -0.78
DNMT1-222ENST00000590619 PXDNQ92626 1479 aa10.16□□□□□ -0.78
DNMT1-222ENST00000590619 KCNQ2O43526 872 aa10.15□□□□□ -0.78
DNMT1-222ENST00000590619 SPHKAPQ2M3C7 1700 aa10.15□□□□□ -0.78
DNMT1-222ENST00000590619 NRXN3Q9Y4C0 1643 aa10.15□□□□□ -0.79
DNMT1-222ENST00000590619 NUTM2FA1L443 756 aa10.14□□□□□ -0.79
DNMT1-222ENST00000590619 PLEKHG5O94827 1062 aa10.14□□□□□ -0.79
DNMT1-222ENST00000590619 TRIM37O94972 964 aa10.14□□□□□ -0.79
DNMT1-222ENST00000590619 APBA3O96018 575 aa10.14□□□□□ -0.79
DNMT1-222ENST00000590619 KRT28Q7Z3Y7 464 aa10.14□□□□□ -0.79
DNMT1-222ENST00000590619 DISP2A7MBM2 1401 aa10.14□□□□□ -0.79
DNMT1-222ENST00000590619 ANKRD50Q9ULJ7 1429 aa10.14□□□□□ -0.79
DNMT1-222ENST00000590619 LRPPRCP42704 1394 aaKnown RBP10.14□□□□□ -0.79
DNMT1-222ENST00000590619 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
DNMT1-222ENST00000590619 NBPF8Q3BBV2 869 aa10.13□□□□□ -0.79
DNMT1-222ENST00000590619 NBPF14Q5TI25 921 aa10.13□□□□□ -0.79
DNMT1-222ENST00000590619 NALCNQ8IZF0 1738 aa10.13□□□□□ -0.79
DNMT1-222ENST00000590619 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.13□□□□□ -0.79
DNMT1-222ENST00000590619 MARF1Q9Y4F3 1742 aaKnown RBP10.11□□□□□ -0.79
DNMT1-222ENST00000590619 NINLQ9Y2I6 1382 aa10.11□□□□□ -0.79
DNMT1-222ENST00000590619 ADGRL2O95490 1459 aa10.1□□□□□ -0.79
DNMT1-222ENST00000590619 FAM196AQ6ZSG2 479 aa10.1□□□□□ -0.79
DNMT1-222ENST00000590619 BTG4Q9NY30 223 aa10.1□□□□□ -0.79
DNMT1-222ENST00000590619 UTRNP46939 3433 aa10.09□□□□□ -0.79
DNMT1-222ENST00000590619 PTPN23Q9H3S7 1636 aa10.08□□□□□ -0.8
DNMT1-222ENST00000590619 WAPLQ7Z5K2 1190 aa10.08□□□□□ -0.8
DNMT1-222ENST00000590619 CROCC2H7BZ55 1655 aa10.08□□□□□ -0.8
DNMT1-222ENST00000590619 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
DNMT1-222ENST00000590619 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
DNMT1-222ENST00000590619 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
DNMT1-222ENST00000590619 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
DNMT1-222ENST00000590619 PSME1Q06323 249 aa10.07□□□□□ -0.8
DNMT1-222ENST00000590619 NUP155O75694 1391 aa10.06□□□□□ -0.8
DNMT1-222ENST00000590619 PARD3Q8TEW0 1356 aa10.06□□□□□ -0.8
DNMT1-222ENST00000590619 LMOD2Q6P5Q4 547 aa10.06□□□□□ -0.8
DNMT1-222ENST00000590619 E9PCH4 1651 aa10.06□□□□□ -0.8
DNMT1-222ENST00000590619 PDGFDQ9GZP0 370 aaPredicted RBP10.05□□□□□ -0.8
DNMT1-222ENST00000590619 USP32Q8NFA0 1604 aa10.04□□□□□ -0.8
DNMT1-222ENST00000590619 FAM50AQ14320 339 aaKnown RBP10.04□□□□□ -0.8
DNMT1-222ENST00000590619 SYT17Q9BSW7 474 aa10.04□□□□□ -0.8
DNMT1-222ENST00000590619 VPS8Q8N3P4 1428 aa10.04□□□□□ -0.8
DNMT1-222ENST00000590619 RGPD1P0DJD0 1748 aa10.04□□□□□ -0.8
DNMT1-222ENST00000590619 CAMTA1Q9Y6Y1 1673 aa10.03□□□□□ -0.8
DNMT1-222ENST00000590619 PTGER2P43116 358 aa10.03□□□□□ -0.8
DNMT1-222ENST00000590619 PRAG1Q86YV5 1406 aa10.03□□□□□ -0.8
DNMT1-222ENST00000590619 STK26Q9P289 416 aa10.03□□□□□ -0.8
DNMT1-222ENST00000590619 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
DNMT1-222ENST00000590619 CCDC144AA2RUR9 1427 aa10.02□□□□□ -0.81
DNMT1-222ENST00000590619 NAIPQ13075 1403 aa10.02□□□□□ -0.81
DNMT1-222ENST00000590619 CEP350Q5VT06 3117 aa10.02□□□□□ -0.81
DNMT1-222ENST00000590619 GIGYF1O75420 1035 aaPredicted RBP10.02□□□□□ -0.81
DNMT1-222ENST00000590619 SPATA31A1Q5TZJ5 1347 aa10.02□□□□□ -0.81
DNMT1-222ENST00000590619 SBNO1A3KN83 1393 aa10.01□□□□□ -0.81
DNMT1-222ENST00000590619 ZBTB7AO95365 584 aa10.01□□□□□ -0.81
DNMT1-222ENST00000590619 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
DNMT1-222ENST00000590619 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
DNMT1-222ENST00000590619 NEXMIFQ5QGS0 1516 aa10.01□□□□□ -0.81
DNMT1-222ENST00000590619 TNS3Q68CZ2 1445 aa10□□□□□ -0.81
DNMT1-222ENST00000590619 TNS1Q9HBL0 1735 aaKnown RBP10□□□□□ -0.81
DNMT1-222ENST00000590619 NWD2Q9ULI1 1742 aa10□□□□□ -0.81
DNMT1-222ENST00000590619 PDE3BQ13370 1112 aa10□□□□□ -0.81
DNMT1-222ENST00000590619 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
DNMT1-222ENST00000590619 ARHGEF10O15013 1369 aa9.99□□□□□ -0.81
DNMT1-222ENST00000590619 PLEKHH1Q9ULM0 1364 aa9.99□□□□□ -0.81
DNMT1-222ENST00000590619 CDC42BPGQ6DT37 1551 aa9.98□□□□□ -0.81
DNMT1-222ENST00000590619 APLP2Q06481 763 aa9.98□□□□□ -0.81
DNMT1-222ENST00000590619 PROM2Q8N271 834 aa9.98□□□□□ -0.81
DNMT1-222ENST00000590619 PMFBP1Q8TBY8 1022 aa9.98□□□□□ -0.81
DNMT1-222ENST00000590619 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
DNMT1-222ENST00000590619 PLCH1Q4KWH8 1693 aa9.98□□□□□ -0.81
DNMT1-222ENST00000590619 RPGRIP1LQ68CZ1 1315 aa9.98□□□□□ -0.81
DNMT1-222ENST00000590619 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
DNMT1-222ENST00000590619 PLSCR1O15162 318 aa9.97□□□□□ -0.81
DNMT1-222ENST00000590619 TMEM132EQ6IEE7 984 aa9.97□□□□□ -0.81
DNMT1-222ENST00000590619 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
DNMT1-222ENST00000590619 BARGINQ6ZT62 677 aa9.96□□□□□ -0.82
DNMT1-222ENST00000590619 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
DNMT1-222ENST00000590619 CHRNA2Q15822 529 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms