RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 ZMYM3Q14202 1370 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 DISP3Q9P2K9 1392 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 GAPVD1Q14C86 1478 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 IGSF3O75054 1194 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 KLHL40Q2TBA0 621 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 PDLIM2Q96JY6 352 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 KIAA0586Q9BVV6 1533 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 E9PSI1 815 aa9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 NPM1P06748 294 aaKnown RBP eCLIP9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 CAVIN1Q6NZI2 390 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 CFDP1Q9UEE9 299 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-229ENST00000590506 RLBP1P12271 317 aa9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 RWDD1Q9H446 243 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 NUP155O75694 1391 aa9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 AK9Q5TCS8 1911 aa9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 SPDYE4A6NLX3 237 aa9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 DNTTIP2Q5QJE6 756 aaKnown RBP9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 MYRIPQ8NFW9 859 aa9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 SNX21Q969T3 373 aa9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 IBTKQ9P2D0 1353 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-229ENST00000590506 ZNF445P59923 1031 aa9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 NBPF1Q3BBV0 1214 aa9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 ZSCAN23Q3MJ62 389 aa9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 CLASP1Q7Z460 1538 aa9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 BAG4O95429 457 aaKnown RBP9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 CGNQ9P2M7 1197 aaKnown RBP9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 SCAPERQ9BY12 1400 aa9.6□□□□□ -0.87
NEDD4L-229ENST00000590506 NINLQ9Y2I6 1382 aa9.59□□□□□ -0.87
NEDD4L-229ENST00000590506 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
NEDD4L-229ENST00000590506 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
NEDD4L-229ENST00000590506 MCM5P33992 734 aa9.59□□□□□ -0.87
NEDD4L-229ENST00000590506 CCDC39Q9UFE4 941 aa9.59□□□□□ -0.87
NEDD4L-229ENST00000590506 COL17A1Q9UMD9 1497 aaPredicted RBP9.59□□□□□ -0.87
NEDD4L-229ENST00000590506 MCTP1Q6DN14 999 aa9.59□□□□□ -0.87
NEDD4L-229ENST00000590506 WDR62O43379 1518 aa9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 ANKRD30AQ9BXX3 1397 aa9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 BCL2L13Q9BXK5 485 aa9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 CCDC144AA2RUR9 1427 aa9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 ANKRD50Q9ULJ7 1429 aa9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 MAPK8IP2Q13387 824 aaPredicted RBP9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
NEDD4L-229ENST00000590506 RBM25P49756 843 aaKnown RBP9.57□□□□□ -0.88
NEDD4L-229ENST00000590506 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
NEDD4L-229ENST00000590506 FAM135AQ9P2D6 1515 aa9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 PTMAP06454 111 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 CDK11BP21127 795 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 KIAA2012Q0VF49 1180 aa9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 RGL3Q3MIN7 710 aa9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 TESK2Q96S53 571 aa9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 KNSTRNQ9Y448 316 aa9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 ZNF771Q7L3S4 317 aaPredicted RBP9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 MPNDQ8N594 471 aa9.56□□□□□ -0.88
NEDD4L-229ENST00000590506 K7ELQ4 463 aaPredicted RBP9.55□□□□□ -0.88
NEDD4L-229ENST00000590506 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
NEDD4L-229ENST00000590506 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
NEDD4L-229ENST00000590506 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
NEDD4L-229ENST00000590506 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
NEDD4L-229ENST00000590506 LMBRD1Q9NUN5 540 aa9.55□□□□□ -0.88
NEDD4L-229ENST00000590506 ERBINQ96RT1 1412 aa9.55□□□□□ -0.88
NEDD4L-229ENST00000590506 TMF1P82094 1093 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 TRPM1Q7Z4N2 1603 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 RNF214Q8ND24 703 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 KIF2CQ99661 725 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 U2AF2P26368 475 aaKnown RBP eCLIP9.54□□□□□ -0.883e-11■■■□□ 17.2
NEDD4L-229ENST00000590506 CLEC17AQ6ZS10 378 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 CEP170Q5SW79 1584 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 URB2Q14146 1524 aaKnown RBP9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 PDCL2Q8N4E4 241 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
NEDD4L-229ENST00000590506 ADGRL2O95490 1459 aa9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 MAGI2Q86UL8 1455 aa9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 SYCE3A1L190 88 aa9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 C17orf53Q8N3J3 647 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 KIF3AQ9Y496 699 aa9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 ADGBQ8N7X0 1667 aa9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
NEDD4L-229ENST00000590506 PRAG1Q86YV5 1406 aa9.52□□□□□ -0.88
NEDD4L-229ENST00000590506 PLXNC1O60486 1568 aa9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 PRPF40AO75400 957 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 GTF2F1P35269 517 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 HMGN5P82970 282 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 GPT2Q8TD30 523 aa9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 ABCC2Q92887 1545 aa9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 WWC1Q8IX03 1113 aa9.52□□□□□ -0.89
NEDD4L-229ENST00000590506 KCNJ4P48050 445 aa9.51□□□□□ -0.89
NEDD4L-229ENST00000590506 KDM5DQ9BY66 1539 aa9.51□□□□□ -0.89
NEDD4L-229ENST00000590506 NUP153P49790 1475 aaKnown RBP9.51□□□□□ -0.89
NEDD4L-229ENST00000590506 PKP1Q13835 747 aa9.51□□□□□ -0.89
NEDD4L-229ENST00000590506 MVPQ14764 893 aaKnown RBP9.51□□□□□ -0.89
NEDD4L-229ENST00000590506 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms