RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SPATA31E1Q6ZUB1 1445 aa15.19■□□□□ 0.02
SDF2-208ENST00000589788 MNX1P50219 401 aaPredicted RBP15.18■□□□□ 0.02
SDF2-208ENST00000589788 NUBP1P53384 320 aa15.18■□□□□ 0.02
SDF2-208ENST00000589788 XIRP1Q702N8 1843 aaKnown RBP15.18■□□□□ 0.02
SDF2-208ENST00000589788 TMEM94Q12767 1356 aa15.18■□□□□ 0.02
SDF2-208ENST00000589788 ANKRD30BQ9BXX2 1392 aa15.17■□□□□ 0.02
SDF2-208ENST00000589788 PIP4K2BP78356 416 aa15.17■□□□□ 0.02
SDF2-208ENST00000589788 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
SDF2-208ENST00000589788 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
SDF2-208ENST00000589788 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
SDF2-208ENST00000589788 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
SDF2-208ENST00000589788 AMOTL2Q9Y2J4 779 aa15.16■□□□□ 0.02
SDF2-208ENST00000589788 IFT172Q9UG01 1749 aa15.15■□□□□ 0.02
SDF2-208ENST00000589788 METP08581 1390 aa15.14■□□□□ 0.01
SDF2-208ENST00000589788 C14orf37Q86TY3 774 aa15.14■□□□□ 0.01
SDF2-208ENST00000589788 PTPRUQ92729 1446 aa15.14■□□□□ 0.01
SDF2-208ENST00000589788 MSH6P52701 1360 aa15.13■□□□□ 0.01
SDF2-208ENST00000589788 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
SDF2-208ENST00000589788 XRN1Q8IZH2 1706 aaKnown RBP15.12■□□□□ 0.01
SDF2-208ENST00000589788 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
SDF2-208ENST00000589788 NCOA3Q9Y6Q9 1424 aa15.11■□□□□ 0.01
SDF2-208ENST00000589788 SETD1AO15047 1707 aaKnown RBP15.11■□□□□ 0.01
SDF2-208ENST00000589788 MYOM2P54296 1465 aa15.08■□□□□ 0
SDF2-208ENST00000589788 PIK3C2GO75747 1445 aa15.08■□□□□ 0
SDF2-208ENST00000589788 ATF3P18847 181 aa15.06■□□□□ 0
SDF2-208ENST00000589788 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
SDF2-208ENST00000589788 C19orf44Q9H6X5 657 aa15.06■□□□□ 0
SDF2-208ENST00000589788 HSPA1LP34931 641 aa15.05■□□□□ -0
SDF2-208ENST00000589788 GSE1Q14687 1217 aa15.05■□□□□ -0
SDF2-208ENST00000589788 DCAF11Q8TEB1 546 aa15.05■□□□□ -0
SDF2-208ENST00000589788 RNF25Q96BH1 459 aaPredicted RBP15.05■□□□□ -0
SDF2-208ENST00000589788 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ -0
SDF2-208ENST00000589788 KDM2AQ9Y2K7 1162 aa15.05■□□□□ -0
SDF2-208ENST00000589788 PTCH1Q13635 1447 aa15.04■□□□□ -0
SDF2-208ENST00000589788 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
SDF2-208ENST00000589788 LAMC1P11047 1609 aa15.04■□□□□ -0
SDF2-208ENST00000589788 NRXN1Q9ULB1 1477 aa15.04■□□□□ -0
SDF2-208ENST00000589788 STAC3Q96MF2 364 aa15.03■□□□□ -0
SDF2-208ENST00000589788 SLAIN2Q9P270 581 aa15.03■□□□□ -0
SDF2-208ENST00000589788 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
SDF2-208ENST00000589788 TMEM132EQ6IEE7 984 aa15.02■□□□□ -0
SDF2-208ENST00000589788 C14orf93Q9H972 538 aaKnown RBP15.02■□□□□ -0
SDF2-208ENST00000589788 STK26Q9P289 416 aa15.02■□□□□ -0
SDF2-208ENST00000589788 ROBO2Q9HCK4 1378 aa15.02□□□□□ -0.01
SDF2-208ENST00000589788 ROBO1Q9Y6N7 1651 aa15.02□□□□□ -0.01
SDF2-208ENST00000589788 DCCP43146 1447 aa15.02□□□□□ -0.01
SDF2-208ENST00000589788 PRAG1Q86YV5 1406 aa15.02□□□□□ -0.01
SDF2-208ENST00000589788 ADGRL3Q9HAR2 1447 aa15.02□□□□□ -0.01
SDF2-208ENST00000589788 HAP1P54257 671 aaPredicted RBP15.01□□□□□ -0.01
SDF2-208ENST00000589788 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
SDF2-208ENST00000589788 LRPPRCP42704 1394 aaKnown RBP15.01□□□□□ -0.01
SDF2-208ENST00000589788 NALCNQ8IZF0 1738 aa15□□□□□ -0.01
SDF2-208ENST00000589788 ASXL1Q8IXJ9 1541 aa15□□□□□ -0.01
SDF2-208ENST00000589788 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
SDF2-208ENST00000589788 DHX57Q6P158 1386 aaKnown RBP14.99□□□□□ -0.01
SDF2-208ENST00000589788 YTHDC2Q9H6S0 1430 aaKnown RBP14.99□□□□□ -0.01
SDF2-208ENST00000589788 KNDC1Q76NI1 1749 aa14.99□□□□□ -0.01
SDF2-208ENST00000589788 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
SDF2-208ENST00000589788 TECPR2O15040 1411 aa14.98□□□□□ -0.01
SDF2-208ENST00000589788 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
SDF2-208ENST00000589788 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
SDF2-208ENST00000589788 DCAF8Q5TAQ9 597 aa14.95□□□□□ -0.02
SDF2-208ENST00000589788 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
SDF2-208ENST00000589788 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
SDF2-208ENST00000589788 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
SDF2-208ENST00000589788 MST1RQ04912 1400 aa14.95□□□□□ -0.02
SDF2-208ENST00000589788 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
SDF2-208ENST00000589788 PHLPP1O60346 1717 aa14.94□□□□□ -0.02
SDF2-208ENST00000589788 ADGRB1O14514 1584 aa14.93□□□□□ -0.02
SDF2-208ENST00000589788 SIRT1Q96EB6 747 aa14.92□□□□□ -0.02
SDF2-208ENST00000589788 PLEKHH1Q9ULM0 1364 aa14.92□□□□□ -0.02
SDF2-208ENST00000589788 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
SDF2-208ENST00000589788 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
SDF2-208ENST00000589788 POGKQ9P215 609 aa14.92□□□□□ -0.02
SDF2-208ENST00000589788 CDC42BPGQ6DT37 1551 aa14.91□□□□□ -0.02
SDF2-208ENST00000589788 DLC1Q96QB1 1528 aa14.91□□□□□ -0.02
SDF2-208ENST00000589788 PAXIP1Q6ZW49 1069 aaPredicted RBP14.91□□□□□ -0.02
SDF2-208ENST00000589788 HS6ST3Q8IZP7 471 aa14.91□□□□□ -0.02
SDF2-208ENST00000589788 PRAM1Q96QH2 718 aa14.91□□□□□ -0.02
SDF2-208ENST00000589788 TRAK1Q9UPV9 953 aa14.91□□□□□ -0.02
SDF2-208ENST00000589788 KIAA1210Q9ULL0 1709 aa14.9□□□□□ -0.02
SDF2-208ENST00000589788 C1orf167Q5SNV9 1468 aa14.9□□□□□ -0.02
SDF2-208ENST00000589788 SAFB2Q14151 953 aaKnown RBP eCLIP14.9□□□□□ -0.02
SDF2-208ENST00000589788 DISP3Q9P2K9 1392 aa14.89□□□□□ -0.03
SDF2-208ENST00000589788 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
SDF2-208ENST00000589788 CHADLQ6NUI6 762 aa14.87□□□□□ -0.03
SDF2-208ENST00000589788 COL16A1Q07092 1604 aaPredicted RBP14.87□□□□□ -0.03
SDF2-208ENST00000589788 MED1Q15648 1581 aaPredicted RBP14.86□□□□□ -0.03
SDF2-208ENST00000589788 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
SDF2-208ENST00000589788 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
SDF2-208ENST00000589788 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
SDF2-208ENST00000589788 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
SDF2-208ENST00000589788 FMN2Q9NZ56 1722 aa14.85□□□□□ -0.03
SDF2-208ENST00000589788 NUTM2FA1L443 756 aa14.85□□□□□ -0.03
SDF2-208ENST00000589788 NBPF1Q3BBV0 1214 aa14.85□□□□□ -0.03
SDF2-208ENST00000589788 ESCO1Q5FWF5 840 aa14.85□□□□□ -0.03
SDF2-208ENST00000589788 ORAI2Q96SN7 254 aa14.85□□□□□ -0.03
SDF2-208ENST00000589788 JCADQ9P266 1359 aa14.85□□□□□ -0.03
SDF2-208ENST00000589788 ARHGEF28Q8N1W1 1705 aaKnown RBP14.84□□□□□ -0.03
SDF2-208ENST00000589788 CFAP44Q96MT7 982 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms