RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
TMED1-204ENST00000588289 MYOM1P52179 1685 aa17.32■□□□□ 0.36
TMED1-204ENST00000588289 MED14O60244 1454 aa17.31■□□□□ 0.36
TMED1-204ENST00000588289 METP08581 1390 aa17.3■□□□□ 0.36
TMED1-204ENST00000588289 KNSTRNQ9Y448 316 aa17.3■□□□□ 0.36
TMED1-204ENST00000588289 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
TMED1-204ENST00000588289 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
TMED1-204ENST00000588289 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
TMED1-204ENST00000588289 RALBP1Q15311 655 aa17.28■□□□□ 0.36
TMED1-204ENST00000588289 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
TMED1-204ENST00000588289 NPHP4O75161 1426 aaPredicted RBP17.28■□□□□ 0.36
TMED1-204ENST00000588289 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
TMED1-204ENST00000588289 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.36
TMED1-204ENST00000588289 LTBP4Q8N2S1 1624 aa17.27■□□□□ 0.36
TMED1-204ENST00000588289 ADGRB2O60241 1585 aa17.27■□□□□ 0.35
TMED1-204ENST00000588289 TULP4Q9NRJ4 1543 aa17.26■□□□□ 0.35
TMED1-204ENST00000588289 SLC26A8Q96RN1 970 aa17.26■□□□□ 0.35
TMED1-204ENST00000588289 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
TMED1-204ENST00000588289 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
TMED1-204ENST00000588289 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
TMED1-204ENST00000588289 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
TMED1-204ENST00000588289 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
TMED1-204ENST00000588289 PANK3Q9H999 370 aa17.25■□□□□ 0.35
TMED1-204ENST00000588289 TERF2IPQ9NYB0 399 aa17.24■□□□□ 0.35
TMED1-204ENST00000588289 USP32Q8NFA0 1604 aa17.23■□□□□ 0.35
TMED1-204ENST00000588289 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
TMED1-204ENST00000588289 AMOTL2Q9Y2J4 779 aa17.23■□□□□ 0.35
TMED1-204ENST00000588289 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
TMED1-204ENST00000588289 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
TMED1-204ENST00000588289 ANKRD36BQ8N2N9 1353 aa17.2■□□□□ 0.34
TMED1-204ENST00000588289 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
TMED1-204ENST00000588289 MYBBP1AQ9BQG0 1328 aaKnown RBP17.2■□□□□ 0.34
TMED1-204ENST00000588289 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
TMED1-204ENST00000588289 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
TMED1-204ENST00000588289 ATP7BP35670 1465 aa17.18■□□□□ 0.34
TMED1-204ENST00000588289 NSD2O96028 1365 aa17.18■□□□□ 0.34
TMED1-204ENST00000588289 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
TMED1-204ENST00000588289 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
TMED1-204ENST00000588289 NWD1Q149M9 1564 aa17.17■□□□□ 0.34
TMED1-204ENST00000588289 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
TMED1-204ENST00000588289 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
TMED1-204ENST00000588289 NKTRP30414 1462 aaKnown RBP17.16■□□□□ 0.34
TMED1-204ENST00000588289 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
TMED1-204ENST00000588289 PTPRUQ92729 1446 aa17.15■□□□□ 0.34
TMED1-204ENST00000588289 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
TMED1-204ENST00000588289 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.15■□□□□ 0.34
TMED1-204ENST00000588289 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
TMED1-204ENST00000588289 PLEKHH1Q9ULM0 1364 aa17.15■□□□□ 0.34
TMED1-204ENST00000588289 KIF20BQ96Q89 1820 aa17.14■□□□□ 0.34
TMED1-204ENST00000588289 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
TMED1-204ENST00000588289 KCNA6P17658 529 aa17.14■□□□□ 0.33
TMED1-204ENST00000588289 NLRP13Q86W25 1043 aa17.14■□□□□ 0.33
TMED1-204ENST00000588289 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
TMED1-204ENST00000588289 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
TMED1-204ENST00000588289 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
TMED1-204ENST00000588289 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
TMED1-204ENST00000588289 NCKAP5LQ9HCH0 1330 aa17.13■□□□□ 0.33
TMED1-204ENST00000588289 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
TMED1-204ENST00000588289 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
TMED1-204ENST00000588289 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
TMED1-204ENST00000588289 PPIP5K1Q6PFW1 1433 aa17.12■□□□□ 0.33
TMED1-204ENST00000588289 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
TMED1-204ENST00000588289 FMN2Q9NZ56 1722 aa17.11■□□□□ 0.33
TMED1-204ENST00000588289 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
TMED1-204ENST00000588289 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
TMED1-204ENST00000588289 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
TMED1-204ENST00000588289 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
TMED1-204ENST00000588289 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
TMED1-204ENST00000588289 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
TMED1-204ENST00000588289 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
TMED1-204ENST00000588289 NUDT16Q96DE0 195 aaKnown RBP17.09■□□□□ 0.33
TMED1-204ENST00000588289 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
TMED1-204ENST00000588289 NALCNQ8IZF0 1738 aa17.09■□□□□ 0.33
TMED1-204ENST00000588289 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
TMED1-204ENST00000588289 A0A1W2PP64 1363 aa17.08■□□□□ 0.32
TMED1-204ENST00000588289 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
TMED1-204ENST00000588289 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
TMED1-204ENST00000588289 EDC4Q6P2E9 1401 aaKnown RBP17.06■□□□□ 0.32
TMED1-204ENST00000588289 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
TMED1-204ENST00000588289 CABP1Q9NZU7 370 aa17.06■□□□□ 0.32
TMED1-204ENST00000588289 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
TMED1-204ENST00000588289 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
TMED1-204ENST00000588289 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
TMED1-204ENST00000588289 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
TMED1-204ENST00000588289 HSPA1LP34931 641 aa17.02■□□□□ 0.32
TMED1-204ENST00000588289 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
TMED1-204ENST00000588289 DCCP43146 1447 aa17.01■□□□□ 0.31
TMED1-204ENST00000588289 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
TMED1-204ENST00000588289 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
TMED1-204ENST00000588289 ZNF335Q9H4Z2 1342 aaPredicted RBP17■□□□□ 0.31
TMED1-204ENST00000588289 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
TMED1-204ENST00000588289 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
TMED1-204ENST00000588289 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
TMED1-204ENST00000588289 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
TMED1-204ENST00000588289 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
TMED1-204ENST00000588289 INSRP06213 1382 aa16.99■□□□□ 0.31
TMED1-204ENST00000588289 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
TMED1-204ENST00000588289 ATF3P18847 181 aa16.97■□□□□ 0.31
TMED1-204ENST00000588289 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
TMED1-204ENST00000588289 MSH6P52701 1360 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms