RNA–Protein interactions for RNA: ENST00000588164.2

LAMA3-209, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-209ENST00000588164 KANK1Q14678 1352 aa10.8□□□□□ -0.68
LAMA3-209ENST00000588164 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
LAMA3-209ENST00000588164 FNBP4Q8N3X1 1017 aaPredicted RBP10.8□□□□□ -0.68
LAMA3-209ENST00000588164 ADAMTS13Q76LX8 1427 aa10.8□□□□□ -0.68
LAMA3-209ENST00000588164 USP21Q9UK80 565 aa10.79□□□□□ -0.68
LAMA3-209ENST00000588164 BCL9LQ86UU0 1499 aa10.79□□□□□ -0.68
LAMA3-209ENST00000588164 RIMS2Q9UQ26 1411 aa10.78□□□□□ -0.68
LAMA3-209ENST00000588164 DSG3P32926 999 aa10.78□□□□□ -0.68
LAMA3-209ENST00000588164 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
LAMA3-209ENST00000588164 KIF15Q9NS87 1388 aa10.77□□□□□ -0.68
LAMA3-209ENST00000588164 TMEM132AQ24JP5 1023 aa10.77□□□□□ -0.69
LAMA3-209ENST00000588164 PTPN23Q9H3S7 1636 aa10.76□□□□□ -0.69
LAMA3-209ENST00000588164 PPP1R15AO75807 674 aaPredicted RBP10.76□□□□□ -0.69
LAMA3-209ENST00000588164 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
LAMA3-209ENST00000588164 MYOM3Q5VTT5 1437 aa10.75□□□□□ -0.69
LAMA3-209ENST00000588164 NALCNQ8IZF0 1738 aa10.75□□□□□ -0.69
LAMA3-209ENST00000588164 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.75□□□□□ -0.69
LAMA3-209ENST00000588164 ADAMTS2O95450 1211 aa10.74□□□□□ -0.69
LAMA3-209ENST00000588164 HRCP23327 699 aa10.73□□□□□ -0.69
LAMA3-209ENST00000588164 IFFO2Q5TF58 517 aa10.73□□□□□ -0.69
LAMA3-209ENST00000588164 SPINK5Q9NQ38 1064 aaPredicted RBP10.73□□□□□ -0.69
LAMA3-209ENST00000588164 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
LAMA3-209ENST00000588164 ADGRL3Q9HAR2 1447 aa10.73□□□□□ -0.69
LAMA3-209ENST00000588164 MYOM2P54296 1465 aa10.73□□□□□ -0.69
LAMA3-209ENST00000588164 GLI3P10071 1580 aa10.73□□□□□ -0.69
LAMA3-209ENST00000588164 YY1P25490 414 aa10.72□□□□□ -0.69
LAMA3-209ENST00000588164 SF3B2Q13435 895 aaKnown RBP10.72□□□□□ -0.69
LAMA3-209ENST00000588164 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
LAMA3-209ENST00000588164 PTPRUQ92729 1446 aa10.72□□□□□ -0.69
LAMA3-209ENST00000588164 NRXN3Q9Y4C0 1643 aa10.72□□□□□ -0.69
LAMA3-209ENST00000588164 SOS2Q07890 1332 aaPredicted RBP10.71□□□□□ -0.69
LAMA3-209ENST00000588164 IQGAP3Q86VI3 1631 aa10.71□□□□□ -0.69
LAMA3-209ENST00000588164 GJD4Q96KN9 370 aaPredicted RBP10.71□□□□□ -0.69
LAMA3-209ENST00000588164 AMOTL2Q9Y2J4 779 aa10.71□□□□□ -0.69
LAMA3-209ENST00000588164 RGPD1P0DJD0 1748 aa10.7□□□□□ -0.7
LAMA3-209ENST00000588164 DEFB132Q7Z7B7 95 aa10.7□□□□□ -0.7
LAMA3-209ENST00000588164 C1orf167Q5SNV9 1468 aa10.69□□□□□ -0.7
LAMA3-209ENST00000588164 RALGAPBQ86X10 1494 aa10.68□□□□□ -0.7
LAMA3-209ENST00000588164 ABCC5O15440 1437 aa10.67□□□□□ -0.7
LAMA3-209ENST00000588164 DDX17Q92841 729 aaKnown RBP10.67□□□□□ -0.7
LAMA3-209ENST00000588164 NWD2Q9ULI1 1742 aa10.67□□□□□ -0.7
LAMA3-209ENST00000588164 CAPN15O75808 1086 aa10.66□□□□□ -0.7
LAMA3-209ENST00000588164 PAXIP1Q6ZW49 1069 aaPredicted RBP10.66□□□□□ -0.7
LAMA3-209ENST00000588164 SLIT2O94813 1529 aa10.66□□□□□ -0.7
LAMA3-209ENST00000588164 PSDA5PKW4 1024 aaPredicted RBP10.65□□□□□ -0.7
LAMA3-209ENST00000588164 BAG6P46379 1132 aa10.65□□□□□ -0.7
LAMA3-209ENST00000588164 RRP7BPQ9NSQ0 103 aa10.65□□□□□ -0.7
LAMA3-209ENST00000588164 DISP2A7MBM2 1401 aa10.64□□□□□ -0.71
LAMA3-209ENST00000588164 DAPK1P53355 1430 aa10.64□□□□□ -0.71
LAMA3-209ENST00000588164 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
LAMA3-209ENST00000588164 ANKRD30AQ9BXX3 1397 aa10.64□□□□□ -0.71
LAMA3-209ENST00000588164 E9PCH4 1651 aa10.63□□□□□ -0.71
LAMA3-209ENST00000588164 USP32Q8NFA0 1604 aa10.63□□□□□ -0.71
LAMA3-209ENST00000588164 UNC5CLQ8IV45 518 aa10.63□□□□□ -0.71
LAMA3-209ENST00000588164 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
LAMA3-209ENST00000588164 PXDNQ92626 1479 aa10.62□□□□□ -0.71
LAMA3-209ENST00000588164 PLCH1Q4KWH8 1693 aa10.62□□□□□ -0.71
LAMA3-209ENST00000588164 UTRNP46939 3433 aa10.61□□□□□ -0.71
LAMA3-209ENST00000588164 PRAG1Q86YV5 1406 aa10.61□□□□□ -0.71
LAMA3-209ENST00000588164 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
LAMA3-209ENST00000588164 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
LAMA3-209ENST00000588164 NBR1Q14596 966 aa10.61□□□□□ -0.71
LAMA3-209ENST00000588164 ADGRL2O95490 1459 aa10.61□□□□□ -0.71
LAMA3-209ENST00000588164 ADGRB2O60241 1585 aa10.6□□□□□ -0.71
LAMA3-209ENST00000588164 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
LAMA3-209ENST00000588164 NPHP3Q7Z494 1330 aa10.59□□□□□ -0.71
LAMA3-209ENST00000588164 KRT27Q7Z3Y8 459 aa10.59□□□□□ -0.71
LAMA3-209ENST00000588164 SEPT12Q8IYM1 358 aa10.59□□□□□ -0.71
LAMA3-209ENST00000588164 METP08581 1390 aa10.59□□□□□ -0.71
LAMA3-209ENST00000588164 CDC42BPGQ6DT37 1551 aa10.59□□□□□ -0.71
LAMA3-209ENST00000588164 RREB1Q92766 1687 aa10.58□□□□□ -0.72
LAMA3-209ENST00000588164 NINLQ9Y2I6 1382 aa10.58□□□□□ -0.72
LAMA3-209ENST00000588164 PODXL2Q9NZ53 605 aa10.58□□□□□ -0.72
LAMA3-209ENST00000588164 CHD4Q14839 1912 aa10.58□□□□□ -0.72
LAMA3-209ENST00000588164 R3HDM1Q15032 1099 aaKnown RBP10.57□□□□□ -0.72
LAMA3-209ENST00000588164 VPS72Q15906 364 aa10.57□□□□□ -0.72
LAMA3-209ENST00000588164 ORAI2Q96SN7 254 aa10.57□□□□□ -0.72
LAMA3-209ENST00000588164 ABCA3Q99758 1704 aa10.56□□□□□ -0.72
LAMA3-209ENST00000588164 LRPPRCP42704 1394 aaKnown RBP10.56□□□□□ -0.72
LAMA3-209ENST00000588164 PARD3Q8TEW0 1356 aa10.56□□□□□ -0.72
LAMA3-209ENST00000588164 CHGAP10645 457 aaKnown RBP10.56□□□□□ -0.72
LAMA3-209ENST00000588164 KIF1AQ12756 1690 aa10.56□□□□□ -0.72
LAMA3-209ENST00000588164 NRAPQ86VF7 1730 aa10.55□□□□□ -0.72
LAMA3-209ENST00000588164 SENP3-EIF4A1A0A087X0R7 540 aa10.55□□□□□ -0.72
LAMA3-209ENST00000588164 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
LAMA3-209ENST00000588164 TSHZ2Q9NRE2 1034 aa10.55□□□□□ -0.72
LAMA3-209ENST00000588164 ANKRD50Q9ULJ7 1429 aa10.55□□□□□ -0.72
LAMA3-209ENST00000588164 NUP188Q5SRE5 1749 aa10.55□□□□□ -0.72
LAMA3-209ENST00000588164 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
LAMA3-209ENST00000588164 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
LAMA3-209ENST00000588164 EN1Q05925 392 aaPredicted RBP10.53□□□□□ -0.72
LAMA3-209ENST00000588164 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
LAMA3-209ENST00000588164 CEP350Q5VT06 3117 aa10.52□□□□□ -0.72
LAMA3-209ENST00000588164 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
LAMA3-209ENST00000588164 THSD7AQ9UPZ6 1657 aa10.52□□□□□ -0.73
LAMA3-209ENST00000588164 VPS8Q8N3P4 1428 aa10.51□□□□□ -0.73
LAMA3-209ENST00000588164 ROBO2Q9HCK4 1378 aa10.51□□□□□ -0.73
LAMA3-209ENST00000588164 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
LAMA3-209ENST00000588164 C1QTNF8P60827 252 aa10.5□□□□□ -0.73
LAMA3-209ENST00000588164 KIF1BO60333 1816 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms