RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 HOXA2O43364 376 aa9.8□□□□□ -0.84
TUBD1-208ENST00000588009 FDX1P10109 184 aa9.8□□□□□ -0.84
TUBD1-208ENST00000588009 ZBTB3Q9H5J0 574 aa9.8□□□□□ -0.84
TUBD1-208ENST00000588009 KIAA1468Q9P260 1216 aa9.8□□□□□ -0.84
TUBD1-208ENST00000588009 VPS9D1Q9Y2B5 631 aa9.8□□□□□ -0.84
TUBD1-208ENST00000588009 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
TUBD1-208ENST00000588009 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
TUBD1-208ENST00000588009 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
TUBD1-208ENST00000588009 SLC10A3P09131 477 aa9.77□□□□□ -0.85
TUBD1-208ENST00000588009 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
TUBD1-208ENST00000588009 GJD4Q96KN9 370 aaPredicted RBP9.77□□□□□ -0.85
TUBD1-208ENST00000588009 ZBED2Q9BTP6 218 aa9.77□□□□□ -0.85
TUBD1-208ENST00000588009 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
TUBD1-208ENST00000588009 GOLGA8CPA6NN73 597 aa9.76□□□□□ -0.85
TUBD1-208ENST00000588009 SWT1Q5T5J6 900 aaKnown RBP9.76□□□□□ -0.85
TUBD1-208ENST00000588009 GLMNQ92990 594 aa9.76□□□□□ -0.85
TUBD1-208ENST00000588009 PPP1R15AO75807 674 aaPredicted RBP9.75□□□□□ -0.85
TUBD1-208ENST00000588009 NDUFB9Q9Y6M9 179 aa9.75□□□□□ -0.85
TUBD1-208ENST00000588009 GUCA2AQ02747 115 aa9.74□□□□□ -0.85
TUBD1-208ENST00000588009 CTDSPL2Q05D32 466 aa9.74□□□□□ -0.85
TUBD1-208ENST00000588009 IRF5Q13568 498 aa9.74□□□□□ -0.85
TUBD1-208ENST00000588009 RETREG2Q8NC44 543 aa9.74□□□□□ -0.85
TUBD1-208ENST00000588009 HLA-CQ95604 372 aa9.74□□□□□ -0.85
TUBD1-208ENST00000588009 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
TUBD1-208ENST00000588009 KCTD17Q8N5Z5 321 aa9.73□□□□□ -0.85
TUBD1-208ENST00000588009 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
TUBD1-208ENST00000588009 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
TUBD1-208ENST00000588009 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.86
TUBD1-208ENST00000588009 MTMR2Q13614 643 aa9.71□□□□□ -0.86
TUBD1-208ENST00000588009 WASHC4Q2M389 1173 aa9.71□□□□□ -0.86
TUBD1-208ENST00000588009 HDGFL1Q5TGJ6 251 aa9.71□□□□□ -0.86
TUBD1-208ENST00000588009 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.86
TUBD1-208ENST00000588009 HMX1Q9NP08 348 aaPredicted RBP9.71□□□□□ -0.86
TUBD1-208ENST00000588009 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.86
TUBD1-208ENST00000588009 BHMG1C9JSJ3 638 aaPredicted RBP9.7□□□□□ -0.86
TUBD1-208ENST00000588009 HELBQ8NG08 1087 aaPredicted RBP9.7□□□□□ -0.86
TUBD1-208ENST00000588009 SEPT9Q9UHD8 586 aaPredicted RBP9.7□□□□□ -0.86
TUBD1-208ENST00000588009 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
TUBD1-208ENST00000588009 GPR37L1O60883 481 aa9.69□□□□□ -0.86
TUBD1-208ENST00000588009 SLC4A3P48751 1232 aa9.69□□□□□ -0.86
TUBD1-208ENST00000588009 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
TUBD1-208ENST00000588009 ADAMTS19Q8TE59 1207 aa9.69□□□□□ -0.86
TUBD1-208ENST00000588009 RANGAP1P46060 587 aaPredicted RBP9.68□□□□□ -0.86
TUBD1-208ENST00000588009 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
TUBD1-208ENST00000588009 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
TUBD1-208ENST00000588009 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
TUBD1-208ENST00000588009 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
TUBD1-208ENST00000588009 FUT2Q10981 343 aa9.67□□□□□ -0.86
TUBD1-208ENST00000588009 FAM98CQ17RN3 349 aaKnown RBP9.67□□□□□ -0.86
TUBD1-208ENST00000588009 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
TUBD1-208ENST00000588009 TSC1Q92574 1164 aa9.67□□□□□ -0.86
TUBD1-208ENST00000588009 PTPN5P54829 565 aa9.66□□□□□ -0.86
TUBD1-208ENST00000588009 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
TUBD1-208ENST00000588009 WNT2BQ93097 391 aa9.66□□□□□ -0.86
TUBD1-208ENST00000588009 THSD4Q6ZMP0 1018 aa9.65□□□□□ -0.86
TUBD1-208ENST00000588009 CFHP08603 1231 aa9.64□□□□□ -0.87
TUBD1-208ENST00000588009 ATP6V1AP38606 617 aa9.64□□□□□ -0.87
TUBD1-208ENST00000588009 PDE4CQ08493 712 aa9.64□□□□□ -0.87
TUBD1-208ENST00000588009 VAC14Q08AM6 782 aa9.64□□□□□ -0.87
TUBD1-208ENST00000588009 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
TUBD1-208ENST00000588009 PBXIP1Q96AQ6 731 aa9.64□□□□□ -0.87
TUBD1-208ENST00000588009 EPS8L1Q8TE68 723 aa9.63□□□□□ -0.87
TUBD1-208ENST00000588009 SYMPKQ92797 1274 aaKnown RBP9.63□□□□□ -0.87
TUBD1-208ENST00000588009 ALG2Q9H553 416 aa9.63□□□□□ -0.87
TUBD1-208ENST00000588009 RFX1P22670 979 aa9.62□□□□□ -0.87
TUBD1-208ENST00000588009 CFAP70Q5T0N1 1121 aa9.62□□□□□ -0.87
TUBD1-208ENST00000588009 IFFO2Q5TF58 517 aa9.62□□□□□ -0.87
TUBD1-208ENST00000588009 LAPTM4BQ86VI4 370 aa9.62□□□□□ -0.87
TUBD1-208ENST00000588009 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
TUBD1-208ENST00000588009 ANKK1Q8NFD2 765 aa9.61□□□□□ -0.87
TUBD1-208ENST00000588009 PRR7Q8TB68 274 aa9.61□□□□□ -0.87
TUBD1-208ENST00000588009 PPP1R12CQ9BZL4 782 aa9.61□□□□□ -0.87
TUBD1-208ENST00000588009 RGS20O76081 388 aa9.6□□□□□ -0.87
TUBD1-208ENST00000588009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.59□□□□□ -0.87
TUBD1-208ENST00000588009 NR6A1Q15406 480 aa9.59□□□□□ -0.87
TUBD1-208ENST00000588009 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
TUBD1-208ENST00000588009 PER1O15534 1290 aaPredicted RBP9.58□□□□□ -0.88
TUBD1-208ENST00000588009 RNF40O75150 1001 aa9.58□□□□□ -0.88
TUBD1-208ENST00000588009 SOX11P35716 441 aa9.58□□□□□ -0.88
TUBD1-208ENST00000588009 NYAP1Q6ZVC0 841 aa9.58□□□□□ -0.88
TUBD1-208ENST00000588009 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
TUBD1-208ENST00000588009 PALM3A6NDB9 673 aaPredicted RBP9.57□□□□□ -0.88
TUBD1-208ENST00000588009 MORN1Q5T089 497 aa9.56□□□□□ -0.88
TUBD1-208ENST00000588009 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
TUBD1-208ENST00000588009 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
TUBD1-208ENST00000588009 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
TUBD1-208ENST00000588009 DESI1Q6ICB0 168 aa9.55□□□□□ -0.88
TUBD1-208ENST00000588009 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
TUBD1-208ENST00000588009 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
TUBD1-208ENST00000588009 ACTN4O43707 911 aaKnown RBP9.54□□□□□ -0.88
TUBD1-208ENST00000588009 CSB-PGBD3P0DP91 1061 aa9.54□□□□□ -0.88
TUBD1-208ENST00000588009 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
TUBD1-208ENST00000588009 Q3C1V9 767 aa9.54□□□□□ -0.88
TUBD1-208ENST00000588009 PUS10Q3MIT2 529 aaKnown RBP9.54□□□□□ -0.88
TUBD1-208ENST00000588009 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
TUBD1-208ENST00000588009 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
TUBD1-208ENST00000588009 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
TUBD1-208ENST00000588009 LYPD8Q6UX82 237 aa9.53□□□□□ -0.88
TUBD1-208ENST00000588009 SOWAHBA6NEL2 793 aa9.51□□□□□ -0.89
TUBD1-208ENST00000588009 PATL2C9JE40 543 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms