RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 PPP1R15AO75807 674 aaPredicted RBP13.22□□□□□ -0.29
ZNF540-203ENST00000586134 NEXMIFQ5QGS0 1516 aa13.21□□□□□ -0.29
ZNF540-203ENST00000586134 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.29
ZNF540-203ENST00000586134 TMEM94Q12767 1356 aa13.21□□□□□ -0.3
ZNF540-203ENST00000586134 FAM135BQ49AJ0 1406 aa13.2□□□□□ -0.3
ZNF540-203ENST00000586134 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
ZNF540-203ENST00000586134 SOCS7O14512 581 aa13.19□□□□□ -0.3
ZNF540-203ENST00000586134 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
ZNF540-203ENST00000586134 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
ZNF540-203ENST00000586134 PRDM4Q9UKN5 801 aa13.18□□□□□ -0.3
ZNF540-203ENST00000586134 PPLO60437 1756 aa13.17□□□□□ -0.3
ZNF540-203ENST00000586134 HSPA1LP34931 641 aa13.17□□□□□ -0.3
ZNF540-203ENST00000586134 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
ZNF540-203ENST00000586134 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
ZNF540-203ENST00000586134 MSH6P52701 1360 aa13.16□□□□□ -0.3
ZNF540-203ENST00000586134 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
ZNF540-203ENST00000586134 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
ZNF540-203ENST00000586134 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
ZNF540-203ENST00000586134 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
ZNF540-203ENST00000586134 TRIM52Q96A61 297 aa13.15□□□□□ -0.3
ZNF540-203ENST00000586134 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
ZNF540-203ENST00000586134 DCCP43146 1447 aa13.14□□□□□ -0.31
ZNF540-203ENST00000586134 NAP1L2Q9ULW6 460 aaPredicted RBP13.14□□□□□ -0.31
ZNF540-203ENST00000586134 MED1Q15648 1581 aaPredicted RBP13.14□□□□□ -0.31
ZNF540-203ENST00000586134 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.14□□□□□ -0.31
ZNF540-203ENST00000586134 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
ZNF540-203ENST00000586134 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
ZNF540-203ENST00000586134 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
ZNF540-203ENST00000586134 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
ZNF540-203ENST00000586134 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
ZNF540-203ENST00000586134 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
ZNF540-203ENST00000586134 PDCL3Q9H2J4 239 aa13.12□□□□□ -0.31
ZNF540-203ENST00000586134 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
ZNF540-203ENST00000586134 BRD2P25440 801 aaKnown RBP13.1□□□□□ -0.31
ZNF540-203ENST00000586134 NAP1L5Q96NT1 182 aaPredicted RBP13.1□□□□□ -0.31
ZNF540-203ENST00000586134 MPHOSPH9Q99550 1183 aa13.1□□□□□ -0.31
ZNF540-203ENST00000586134 SPATA31E1Q6ZUB1 1445 aa13.09□□□□□ -0.31
ZNF540-203ENST00000586134 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
ZNF540-203ENST00000586134 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
ZNF540-203ENST00000586134 PTCH1Q13635 1447 aa13.09□□□□□ -0.31
ZNF540-203ENST00000586134 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.31
ZNF540-203ENST00000586134 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.31
ZNF540-203ENST00000586134 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
ZNF540-203ENST00000586134 SLAIN2Q9P270 581 aa13.08□□□□□ -0.32
ZNF540-203ENST00000586134 PHLPP1O60346 1717 aa13.08□□□□□ -0.32
ZNF540-203ENST00000586134 AHDC1Q5TGY3 1603 aaPredicted RBP13.08□□□□□ -0.32
ZNF540-203ENST00000586134 METP08581 1390 aa13.07□□□□□ -0.32
ZNF540-203ENST00000586134 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
ZNF540-203ENST00000586134 FRAT1Q92837 279 aaPredicted RBP13.06□□□□□ -0.32
ZNF540-203ENST00000586134 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
ZNF540-203ENST00000586134 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
ZNF540-203ENST00000586134 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
ZNF540-203ENST00000586134 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
ZNF540-203ENST00000586134 COL16A1Q07092 1604 aaPredicted RBP13.05□□□□□ -0.32
ZNF540-203ENST00000586134 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
ZNF540-203ENST00000586134 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
ZNF540-203ENST00000586134 LAMC1P11047 1609 aa13.04□□□□□ -0.32
ZNF540-203ENST00000586134 ATF3P18847 181 aa13.03□□□□□ -0.32
ZNF540-203ENST00000586134 NHSL1Q5SYE7 1610 aa13.03□□□□□ -0.32
ZNF540-203ENST00000586134 SHPRHQ149N8 1683 aa13.03□□□□□ -0.32
ZNF540-203ENST00000586134 CLCN1P35523 988 aa13.03□□□□□ -0.32
ZNF540-203ENST00000586134 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
ZNF540-203ENST00000586134 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
ZNF540-203ENST00000586134 RBM33Q96EV2 1170 aaKnown RBP13.03□□□□□ -0.32
ZNF540-203ENST00000586134 TECPR2O15040 1411 aa13.02□□□□□ -0.32
ZNF540-203ENST00000586134 MYOM2P54296 1465 aa13.02□□□□□ -0.32
ZNF540-203ENST00000586134 GTF2E1P29083 439 aaPredicted RBP13.02□□□□□ -0.33
ZNF540-203ENST00000586134 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
ZNF540-203ENST00000586134 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
ZNF540-203ENST00000586134 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
ZNF540-203ENST00000586134 C14orf37Q86TY3 774 aa13.01□□□□□ -0.33
ZNF540-203ENST00000586134 RRAGDQ9NQL2 400 aaPredicted RBP13.01□□□□□ -0.33
ZNF540-203ENST00000586134 MST1RQ04912 1400 aa13.01□□□□□ -0.33
ZNF540-203ENST00000586134 TPM2P07951 284 aa13.01□□□□□ -0.33
ZNF540-203ENST00000586134 JCADQ9P266 1359 aa13.01□□□□□ -0.33
ZNF540-203ENST00000586134 PIK3C2GO75747 1445 aa13.01□□□□□ -0.33
ZNF540-203ENST00000586134 FOXD1Q16676 465 aa13□□□□□ -0.33
ZNF540-203ENST00000586134 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
ZNF540-203ENST00000586134 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
ZNF540-203ENST00000586134 ANP32CO43423 234 aa13□□□□□ -0.33
ZNF540-203ENST00000586134 RGS3P49796 1198 aa13□□□□□ -0.33
ZNF540-203ENST00000586134 HOMEZQ8IX15 550 aa13□□□□□ -0.33
ZNF540-203ENST00000586134 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
ZNF540-203ENST00000586134 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
ZNF540-203ENST00000586134 ASXL1Q8IXJ9 1541 aa12.99□□□□□ -0.33
ZNF540-203ENST00000586134 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
ZNF540-203ENST00000586134 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
ZNF540-203ENST00000586134 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
ZNF540-203ENST00000586134 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
ZNF540-203ENST00000586134 ABCC11Q96J66 1382 aa12.97□□□□□ -0.33
ZNF540-203ENST00000586134 ROBO2Q9HCK4 1378 aa12.97□□□□□ -0.33
ZNF540-203ENST00000586134 ADGRF5Q8IZF2 1346 aa12.97□□□□□ -0.33
ZNF540-203ENST00000586134 NFKBIBQ15653 356 aa12.97□□□□□ -0.33
ZNF540-203ENST00000586134 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
ZNF540-203ENST00000586134 SPATA31A6Q5VVP1 1343 aa12.97□□□□□ -0.33
ZNF540-203ENST00000586134 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
ZNF540-203ENST00000586134 SMAP1Q8IYB5 467 aaPredicted RBP12.96□□□□□ -0.33
ZNF540-203ENST00000586134 DCAF11Q8TEB1 546 aa12.96□□□□□ -0.33
ZNF540-203ENST00000586134 SIRT1Q96EB6 747 aa12.96□□□□□ -0.33
ZNF540-203ENST00000586134 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms