RNA–Protein interactions for RNA: ENST00000586086.1

DNMT1-206, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-206ENST00000586086 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
DNMT1-206ENST00000586086 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-206ENST00000586086 PROX2Q3B8N5 592 aa11.24□□□□□ -0.61
DNMT1-206ENST00000586086 PNMA1Q8ND90 353 aa11.24□□□□□ -0.61
DNMT1-206ENST00000586086 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
DNMT1-206ENST00000586086 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
DNMT1-206ENST00000586086 PALM3A6NDB9 673 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-206ENST00000586086 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
DNMT1-206ENST00000586086 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
DNMT1-206ENST00000586086 TFIP11Q9UBB9 837 aaKnown RBP11.23□□□□□ -0.61
DNMT1-206ENST00000586086 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
DNMT1-206ENST00000586086 HLA-CQ95604 372 aa11.22□□□□□ -0.61
DNMT1-206ENST00000586086 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
DNMT1-206ENST00000586086 SWT1Q5T5J6 900 aaKnown RBP11.21□□□□□ -0.61
DNMT1-206ENST00000586086 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
DNMT1-206ENST00000586086 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
DNMT1-206ENST00000586086 SOX11P35716 441 aa11.2□□□□□ -0.62
DNMT1-206ENST00000586086 ALG2Q9H553 416 aa11.2□□□□□ -0.62
DNMT1-206ENST00000586086 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
DNMT1-206ENST00000586086 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
DNMT1-206ENST00000586086 SLC10A3P09131 477 aa11.18□□□□□ -0.62
DNMT1-206ENST00000586086 VRTNQ9H8Y1 702 aa11.18□□□□□ -0.62
DNMT1-206ENST00000586086 CFAP99D6REC4 459 aa11.17□□□□□ -0.62
DNMT1-206ENST00000586086 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
DNMT1-206ENST00000586086 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
DNMT1-206ENST00000586086 SLF2Q8IX21 1173 aa11.16□□□□□ -0.62
DNMT1-206ENST00000586086 EPS8L1Q8TE68 723 aa11.16□□□□□ -0.62
DNMT1-206ENST00000586086 EIF4G2P78344 907 aaKnown RBP eCLIP11.15□□□□□ -0.62
DNMT1-206ENST00000586086 NR6A1Q15406 480 aa11.15□□□□□ -0.62
DNMT1-206ENST00000586086 CCDC27Q2M243 656 aa11.15□□□□□ -0.62
DNMT1-206ENST00000586086 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
DNMT1-206ENST00000586086 FUT2Q10981 343 aa11.14□□□□□ -0.63
DNMT1-206ENST00000586086 E9PSI1 815 aa11.13□□□□□ -0.63
DNMT1-206ENST00000586086 ATG7O95352 703 aa11.13□□□□□ -0.63
DNMT1-206ENST00000586086 ZNF428Q96B54 188 aa11.13□□□□□ -0.63
DNMT1-206ENST00000586086 RNF40O75150 1001 aa11.12□□□□□ -0.63
DNMT1-206ENST00000586086 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
DNMT1-206ENST00000586086 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
DNMT1-206ENST00000586086 GPR37L1O60883 481 aa11.11□□□□□ -0.63
DNMT1-206ENST00000586086 ATP6V1AP38606 617 aa11.11□□□□□ -0.63
DNMT1-206ENST00000586086 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
DNMT1-206ENST00000586086 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-206ENST00000586086 CFHP08603 1231 aa11.1□□□□□ -0.63
DNMT1-206ENST00000586086 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
DNMT1-206ENST00000586086 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
DNMT1-206ENST00000586086 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
DNMT1-206ENST00000586086 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
DNMT1-206ENST00000586086 SNPHO15079 494 aa11.08□□□□□ -0.64
DNMT1-206ENST00000586086 ATP9BO43861 1147 aa11.08□□□□□ -0.64
DNMT1-206ENST00000586086 KMT5BQ4FZB7 885 aa11.07□□□□□ -0.64
DNMT1-206ENST00000586086 SND1Q7KZF4 910 aaKnown RBP eCLIP11.07□□□□□ -0.64
DNMT1-206ENST00000586086 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
DNMT1-206ENST00000586086 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
DNMT1-206ENST00000586086 NR1H3Q13133 447 aa11.05□□□□□ -0.64
DNMT1-206ENST00000586086 RETREG3Q86VR2 466 aa11.05□□□□□ -0.64
DNMT1-206ENST00000586086 TMEM88BA6NKF7 163 aa11.04□□□□□ -0.64
DNMT1-206ENST00000586086 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
DNMT1-206ENST00000586086 PSEN2P49810 448 aa11.04□□□□□ -0.64
DNMT1-206ENST00000586086 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
DNMT1-206ENST00000586086 MAMSTRQ6ZN01 415 aa11.04□□□□□ -0.64
DNMT1-206ENST00000586086 SAMD7Q7Z3H4 446 aa11.04□□□□□ -0.64
DNMT1-206ENST00000586086 Q3C1V9 767 aa11.03□□□□□ -0.64
DNMT1-206ENST00000586086 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-206ENST00000586086 SKIP12755 728 aa11.01□□□□□ -0.65
DNMT1-206ENST00000586086 AMOTL2Q9Y2J4 779 aa11.01□□□□□ -0.65
DNMT1-206ENST00000586086 ZBBXA8MT70 800 aa11□□□□□ -0.65
DNMT1-206ENST00000586086 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
DNMT1-206ENST00000586086 POTEJP0CG39 1038 aa10.99□□□□□ -0.65
DNMT1-206ENST00000586086 PUS10Q3MIT2 529 aaKnown RBP10.99□□□□□ -0.65
DNMT1-206ENST00000586086 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-206ENST00000586086 DESI1Q6ICB0 168 aa10.98□□□□□ -0.65
DNMT1-206ENST00000586086 LYPD8Q6UX82 237 aa10.98□□□□□ -0.65
DNMT1-206ENST00000586086 FBXO45P0C2W1 286 aa10.97□□□□□ -0.65
DNMT1-206ENST00000586086 NOVA2Q9UNW9 492 aaKnown RBP10.97□□□□□ -0.65
DNMT1-206ENST00000586086 SLC27A5Q9Y2P5 690 aa10.97□□□□□ -0.65
DNMT1-206ENST00000586086 ELOAQ14241 798 aaKnown RBP10.96□□□□□ -0.65
DNMT1-206ENST00000586086 MORN1Q5T089 497 aa10.96□□□□□ -0.65
DNMT1-206ENST00000586086 TMEM164Q5U3C3 297 aa10.96□□□□□ -0.65
DNMT1-206ENST00000586086 LARP1Q6PKG0 1096 aaKnown RBP10.96□□□□□ -0.65
DNMT1-206ENST00000586086 GNEQ9Y223 722 aaKnown RBP10.96□□□□□ -0.65
DNMT1-206ENST00000586086 USP17L3A6NCW0 530 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 USP17L4A6NCW7 530 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 PIK3CDO00329 1044 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 USP17L1Q7RTZ2 530 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 NFATC2IPQ8NCF5 419 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 SLC4A5Q9BY07 1137 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 NBPF3Q9H094 633 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 FKBPLQ9UIM3 349 aa10.95□□□□□ -0.66
DNMT1-206ENST00000586086 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
DNMT1-206ENST00000586086 DEPDC4Q8N2C3 294 aa10.94□□□□□ -0.66
DNMT1-206ENST00000586086 STK32AQ8WU08 396 aa10.94□□□□□ -0.66
DNMT1-206ENST00000586086 USP17L5A8MUK1 530 aa10.93□□□□□ -0.66
DNMT1-206ENST00000586086 CTHP32929 405 aa10.93□□□□□ -0.66
DNMT1-206ENST00000586086 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
DNMT1-206ENST00000586086 ERBB3P21860 1342 aa10.92□□□□□ -0.66
DNMT1-206ENST00000586086 ACTN4O43707 911 aaKnown RBP10.92□□□□□ -0.66
DNMT1-206ENST00000586086 ARID4AP29374 1257 aaPredicted RBP10.92□□□□□ -0.66
DNMT1-206ENST00000586086 DMRTA1Q5VZB9 504 aa10.92□□□□□ -0.66
DNMT1-206ENST00000586086 ZNF592Q92610 1267 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms