RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 KIDINS220Q9ULH0 1771 aa23.85■■□□□ 1.41
CACTIN-204ENST00000585942 NRXN1Q9ULB1 1477 aa23.84■■□□□ 1.41
CACTIN-204ENST00000585942 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
CACTIN-204ENST00000585942 TCP11L2Q8N4U5 519 aa23.83■■□□□ 1.41
CACTIN-204ENST00000585942 DAXXQ9UER7 740 aaPredicted RBP23.83■■□□□ 1.41
CACTIN-204ENST00000585942 C14orf93Q9H972 538 aaKnown RBP23.83■■□□□ 1.41
CACTIN-204ENST00000585942 SBNO2Q9Y2G9 1366 aa23.83■■□□□ 1.4
CACTIN-204ENST00000585942 MTHFSP49914 203 aa23.82■■□□□ 1.4
CACTIN-204ENST00000585942 GSE1Q14687 1217 aa23.82■■□□□ 1.4
CACTIN-204ENST00000585942 TNNQ9UQP3 1299 aa23.82■■□□□ 1.4
CACTIN-204ENST00000585942 BCL2L13Q9BXK5 485 aa23.81■■□□□ 1.4
CACTIN-204ENST00000585942 NFKBIBQ15653 356 aa23.81■■□□□ 1.4
CACTIN-204ENST00000585942 NPATQ14207 1427 aa23.81■■□□□ 1.4
CACTIN-204ENST00000585942 PDE3AQ14432 1141 aa23.8■■□□□ 1.4
CACTIN-204ENST00000585942 CLUAP1Q96AJ1 413 aa23.8■■□□□ 1.4
CACTIN-204ENST00000585942 RUNDC1Q96C34 613 aa23.79■■□□□ 1.4
CACTIN-204ENST00000585942 NGEFQ8N5V2 710 aa23.79■■□□□ 1.4
CACTIN-204ENST00000585942 CGNL1Q0VF96 1302 aa23.79■■□□□ 1.4
CACTIN-204ENST00000585942 ADGRB3O60242 1522 aa23.78■■□□□ 1.4
CACTIN-204ENST00000585942 RARSP54136 660 aaKnown RBP23.77■■□□□ 1.4
CACTIN-204ENST00000585942 MYO3AQ8NEV4 1616 aa23.77■■□□□ 1.4
CACTIN-204ENST00000585942 SAFB2Q14151 953 aaKnown RBP eCLIP23.77■■□□□ 1.4
CACTIN-204ENST00000585942 SEC24BO95487 1268 aa23.76■■□□□ 1.39
CACTIN-204ENST00000585942 RLBP1P12271 317 aa23.76■■□□□ 1.39
CACTIN-204ENST00000585942 ZNF518AQ6AHZ1 1483 aa23.76■■□□□ 1.39
CACTIN-204ENST00000585942 SHPRHQ149N8 1683 aa23.75■■□□□ 1.39
CACTIN-204ENST00000585942 LMTK2Q8IWU2 1503 aa23.73■■□□□ 1.39
CACTIN-204ENST00000585942 ADGRB1O14514 1584 aa23.73■■□□□ 1.39
CACTIN-204ENST00000585942 CABP2Q9NPB3 220 aa23.73■■□□□ 1.39
CACTIN-204ENST00000585942 SETBP1Q9Y6X0 1596 aa23.72■■□□□ 1.39
CACTIN-204ENST00000585942 QRICH2Q9H0J4 1663 aa23.72■■□□□ 1.39
CACTIN-204ENST00000585942 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
CACTIN-204ENST00000585942 PCDHB15Q9Y5E8 787 aa23.72■■□□□ 1.39
CACTIN-204ENST00000585942 USP19O94966 1318 aa23.71■■□□□ 1.39
CACTIN-204ENST00000585942 U2AF1L5P0DN76 240 aaPredicted RBP23.7■■□□□ 1.38
CACTIN-204ENST00000585942 U2AF1Q01081 240 aaKnown RBP eCLIP23.7■■□□□ 1.38
CACTIN-204ENST00000585942 PKNOX2Q96KN3 472 aa23.69■■□□□ 1.38
CACTIN-204ENST00000585942 PPLO60437 1756 aa23.69■■□□□ 1.38
CACTIN-204ENST00000585942 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
CACTIN-204ENST00000585942 RAPGEF3O95398 923 aa23.68■■□□□ 1.38
CACTIN-204ENST00000585942 NPM1P06748 294 aaKnown RBP eCLIP23.68■■□□□ 1.38
CACTIN-204ENST00000585942 WDR63Q8IWG1 891 aa23.68■■□□□ 1.38
CACTIN-204ENST00000585942 CFAP53Q96M91 514 aa23.68■■□□□ 1.38
CACTIN-204ENST00000585942 RSPH6AQ9H0K4 717 aa23.68■■□□□ 1.38
CACTIN-204ENST00000585942 IQSEC2Q5JU85 1478 aa23.67■■□□□ 1.38
CACTIN-204ENST00000585942 FRAT2O75474 233 aaPredicted RBP23.67■■□□□ 1.38
CACTIN-204ENST00000585942 CD109Q6YHK3 1445 aa23.66■■□□□ 1.38
CACTIN-204ENST00000585942 STK26Q9P289 416 aa23.66■■□□□ 1.38
CACTIN-204ENST00000585942 ZC3H13Q5T200 1668 aaKnown RBP23.66■■□□□ 1.38
CACTIN-204ENST00000585942 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
CACTIN-204ENST00000585942 NINLQ9Y2I6 1382 aa23.65■■□□□ 1.38
CACTIN-204ENST00000585942 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.38
CACTIN-204ENST00000585942 POGZQ7Z3K3 1410 aa23.64■■□□□ 1.37
CACTIN-204ENST00000585942 TSR2Q969E8 191 aaKnown RBP23.64■■□□□ 1.37
CACTIN-204ENST00000585942 MAPK8IP3Q9UPT6 1336 aa23.63■■□□□ 1.37
CACTIN-204ENST00000585942 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
CACTIN-204ENST00000585942 GGNBP2Q9H3C7 697 aa23.62■■□□□ 1.37
CACTIN-204ENST00000585942 CCDC27Q2M243 656 aa23.61■■□□□ 1.37
CACTIN-204ENST00000585942 TULP4Q9NRJ4 1543 aa23.61■■□□□ 1.37
CACTIN-204ENST00000585942 U2SURPO15042 1029 aaKnown RBP23.6■■□□□ 1.37
CACTIN-204ENST00000585942 PDZRN3Q9UPQ7 1066 aa23.6■■□□□ 1.37
CACTIN-204ENST00000585942 ANKRD36BQ8N2N9 1353 aa23.6■■□□□ 1.37
CACTIN-204ENST00000585942 IDI1Q13907 227 aa23.6■■□□□ 1.37
CACTIN-204ENST00000585942 PMFBP1Q8TBY8 1022 aa23.6■■□□□ 1.37
CACTIN-204ENST00000585942 ABCC3O15438 1527 aa23.6■■□□□ 1.37
CACTIN-204ENST00000585942 GLI2P10070 1586 aa23.6■■□□□ 1.37
CACTIN-204ENST00000585942 MLH3Q9UHC1 1453 aa23.59■■□□□ 1.37
CACTIN-204ENST00000585942 SRPK2P78362 688 aaKnown RBP23.59■■□□□ 1.37
CACTIN-204ENST00000585942 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
CACTIN-204ENST00000585942 SIGLEC1Q9BZZ2 1709 aa23.58■■□□□ 1.37
CACTIN-204ENST00000585942 FAM43AQ8N2R8 423 aa23.57■■□□□ 1.36
CACTIN-204ENST00000585942 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
CACTIN-204ENST00000585942 HECW2Q9P2P5 1572 aa23.55■■□□□ 1.36
CACTIN-204ENST00000585942 EXOSC9Q06265 439 aaKnown RBP23.54■■□□□ 1.36
CACTIN-204ENST00000585942 SLKQ9H2G2 1235 aaPredicted RBP23.54■■□□□ 1.36
CACTIN-204ENST00000585942 MVPQ14764 893 aaKnown RBP23.54■■□□□ 1.36
CACTIN-204ENST00000585942 USP32Q8NFA0 1604 aa23.53■■□□□ 1.36
CACTIN-204ENST00000585942 MINK1Q8N4C8 1332 aaPredicted RBP23.53■■□□□ 1.36
CACTIN-204ENST00000585942 FTSJ3Q8IY81 847 aaKnown RBP23.53■■□□□ 1.36
CACTIN-204ENST00000585942 ARHGEF28Q8N1W1 1705 aaKnown RBP23.53■■□□□ 1.36
CACTIN-204ENST00000585942 VIRMAQ69YN4 1812 aaKnown RBP23.53■■□□□ 1.36
CACTIN-204ENST00000585942 RWDD1Q9H446 243 aaPredicted RBP23.53■■□□□ 1.36
CACTIN-204ENST00000585942 ZKSCAN2Q63HK3 967 aa23.52■■□□□ 1.36
CACTIN-204ENST00000585942 PLEKHF1Q96S99 279 aa23.52■■□□□ 1.36
CACTIN-204ENST00000585942 NEXMIFQ5QGS0 1516 aa23.52■■□□□ 1.36
CACTIN-204ENST00000585942 PUS7Q96PZ0 661 aaKnown RBP23.52■■□□□ 1.36
CACTIN-204ENST00000585942 TRIM35Q9UPQ4 493 aa23.52■■□□□ 1.36
CACTIN-204ENST00000585942 TMPOP42166 694 aaKnown RBP23.51■■□□□ 1.35
CACTIN-204ENST00000585942 DZIP1LQ8IYY4 767 aaKnown RBP23.51■■□□□ 1.35
CACTIN-204ENST00000585942 SMC4Q9NTJ3 1288 aa23.51■■□□□ 1.35
CACTIN-204ENST00000585942 NLRP1Q9C000 1473 aa23.51■■□□□ 1.35
CACTIN-204ENST00000585942 FYB1O15117 783 aa23.5■■□□□ 1.35
CACTIN-204ENST00000585942 CAMSAP1Q5T5Y3 1602 aa23.5■■□□□ 1.35
CACTIN-204ENST00000585942 NSD2O96028 1365 aa23.5■■□□□ 1.35
CACTIN-204ENST00000585942 AAMPQ13685 434 aa23.49■■□□□ 1.35
CACTIN-204ENST00000585942 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
CACTIN-204ENST00000585942 TRIM27P14373 513 aa23.49■■□□□ 1.35
CACTIN-204ENST00000585942 PRAM1Q96QH2 718 aa23.49■■□□□ 1.35
CACTIN-204ENST00000585942 ABCC11Q96J66 1382 aa23.48■■□□□ 1.35
CACTIN-204ENST00000585942 FBLN1P23142 703 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms