RNA–Protein interactions for RNA: ENST00000584580.1

LRRC46-204, Transcript of leucine rich repeat containing 46, humanhuman

TSL 2

Gene LRRC46, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46-204ENST00000584580 ABCC11Q96J66 1382 aa15.77■□□□□ 0.11
LRRC46-204ENST00000584580 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
LRRC46-204ENST00000584580 PARD3Q8TEW0 1356 aa15.75■□□□□ 0.11
LRRC46-204ENST00000584580 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
LRRC46-204ENST00000584580 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
LRRC46-204ENST00000584580 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
LRRC46-204ENST00000584580 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
LRRC46-204ENST00000584580 DLC1Q96QB1 1528 aa15.73■□□□□ 0.11
LRRC46-204ENST00000584580 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
LRRC46-204ENST00000584580 PUS7Q96PZ0 661 aaKnown RBP15.71■□□□□ 0.11
LRRC46-204ENST00000584580 NLRP13Q86W25 1043 aa15.7■□□□□ 0.1
LRRC46-204ENST00000584580 MED14O60244 1454 aa15.7■□□□□ 0.1
LRRC46-204ENST00000584580 ROBO2Q9HCK4 1378 aa15.7■□□□□ 0.1
LRRC46-204ENST00000584580 TBX22Q9Y458 520 aa15.7■□□□□ 0.1
LRRC46-204ENST00000584580 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
LRRC46-204ENST00000584580 NSD3Q9BZ95 1437 aa15.69■□□□□ 0.1
LRRC46-204ENST00000584580 BRD4O60885 1362 aaPredicted RBP15.69■□□□□ 0.1
LRRC46-204ENST00000584580 TECPR2O15040 1411 aa15.68■□□□□ 0.1
LRRC46-204ENST00000584580 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
LRRC46-204ENST00000584580 AMOTL2Q9Y2J4 779 aa15.68■□□□□ 0.1
LRRC46-204ENST00000584580 FAM135BQ49AJ0 1406 aa15.67■□□□□ 0.1
LRRC46-204ENST00000584580 PNISRQ8TF01 805 aaKnown RBP15.67■□□□□ 0.1
LRRC46-204ENST00000584580 SIRT1Q96EB6 747 aa15.67■□□□□ 0.1
LRRC46-204ENST00000584580 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
LRRC46-204ENST00000584580 WASLO00401 505 aaPredicted RBP15.66■□□□□ 0.1
LRRC46-204ENST00000584580 CPS1P31327 1500 aa15.66■□□□□ 0.1
LRRC46-204ENST00000584580 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
LRRC46-204ENST00000584580 CABP1Q9NZU7 370 aa15.66■□□□□ 0.1
LRRC46-204ENST00000584580 ANKRD36BQ8N2N9 1353 aa15.65■□□□□ 0.1
LRRC46-204ENST00000584580 SETD1BQ9UPS6 1966 aaKnown RBP15.65■□□□□ 0.1
LRRC46-204ENST00000584580 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
LRRC46-204ENST00000584580 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
LRRC46-204ENST00000584580 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
LRRC46-204ENST00000584580 SENP3-EIF4A1A0A087X0R7 540 aa15.64■□□□□ 0.09
LRRC46-204ENST00000584580 A0A1W2PP64 1363 aa15.64■□□□□ 0.09
LRRC46-204ENST00000584580 NINLQ9Y2I6 1382 aa15.63■□□□□ 0.09
LRRC46-204ENST00000584580 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
LRRC46-204ENST00000584580 NCKAP5LQ9HCH0 1330 aa15.62■□□□□ 0.09
LRRC46-204ENST00000584580 TNNT2P45379 298 aaPredicted RBP15.62■□□□□ 0.09
LRRC46-204ENST00000584580 CGNL1Q0VF96 1302 aa15.62■□□□□ 0.09
LRRC46-204ENST00000584580 NUTM2FA1L443 756 aa15.62■□□□□ 0.09
LRRC46-204ENST00000584580 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
LRRC46-204ENST00000584580 KCNA6P17658 529 aa15.61■□□□□ 0.09
LRRC46-204ENST00000584580 MORC1Q86VD1 984 aa15.61■□□□□ 0.09
LRRC46-204ENST00000584580 NUDT16Q96DE0 195 aaKnown RBP15.61■□□□□ 0.09
LRRC46-204ENST00000584580 DIP2AQ14689 1571 aa15.61■□□□□ 0.09
LRRC46-204ENST00000584580 HDGFL2Q7Z4V5 671 aaPredicted RBP15.6■□□□□ 0.09
LRRC46-204ENST00000584580 GTF3C3Q9Y5Q9 886 aa15.6■□□□□ 0.09
LRRC46-204ENST00000584580 CD163L1Q9NR16 1453 aa15.6■□□□□ 0.09
LRRC46-204ENST00000584580 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.58■□□□□ 0.09
LRRC46-204ENST00000584580 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
LRRC46-204ENST00000584580 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
LRRC46-204ENST00000584580 NPHP4O75161 1426 aaPredicted RBP15.57■□□□□ 0.08
LRRC46-204ENST00000584580 PTCH1Q13635 1447 aa15.57■□□□□ 0.08
LRRC46-204ENST00000584580 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
LRRC46-204ENST00000584580 GGNBP2Q9H3C7 697 aa15.57■□□□□ 0.08
LRRC46-204ENST00000584580 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
LRRC46-204ENST00000584580 RBM33Q96EV2 1170 aaKnown RBP15.56■□□□□ 0.08
LRRC46-204ENST00000584580 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
LRRC46-204ENST00000584580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.56■□□□□ 0.08
LRRC46-204ENST00000584580 FYB1O15117 783 aa15.54■□□□□ 0.08
LRRC46-204ENST00000584580 XRN1Q8IZH2 1706 aaKnown RBP15.54■□□□□ 0.08
LRRC46-204ENST00000584580 ZBED9Q6R2W3 1325 aa15.54■□□□□ 0.08
LRRC46-204ENST00000584580 HSPA2P54652 639 aa15.53■□□□□ 0.08
LRRC46-204ENST00000584580 USP32Q8NFA0 1604 aa15.53■□□□□ 0.08
LRRC46-204ENST00000584580 ATP7BP35670 1465 aa15.53■□□□□ 0.08
LRRC46-204ENST00000584580 NSD2O96028 1365 aa15.53■□□□□ 0.08
LRRC46-204ENST00000584580 WDR43Q15061 677 aaKnown RBP eCLIP15.52■□□□□ 0.08
LRRC46-204ENST00000584580 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.08
LRRC46-204ENST00000584580 ADGRB2O60241 1585 aa15.52■□□□□ 0.08
LRRC46-204ENST00000584580 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.07
LRRC46-204ENST00000584580 CPSF1Q10570 1443 aaKnown RBP15.5■□□□□ 0.07
LRRC46-204ENST00000584580 MTHFSP49914 203 aa15.5■□□□□ 0.07
LRRC46-204ENST00000584580 PMFBP1Q8TBY8 1022 aa15.49■□□□□ 0.07
LRRC46-204ENST00000584580 ACEP12821 1306 aa15.48■□□□□ 0.07
LRRC46-204ENST00000584580 CHD2O14647 1828 aaKnown RBP15.48■□□□□ 0.07
LRRC46-204ENST00000584580 NME9Q86XW9 330 aa15.48■□□□□ 0.07
LRRC46-204ENST00000584580 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
LRRC46-204ENST00000584580 CDC42BPGQ6DT37 1551 aa15.48■□□□□ 0.07
LRRC46-204ENST00000584580 EDC4Q6P2E9 1401 aaKnown RBP15.47■□□□□ 0.07
LRRC46-204ENST00000584580 PLEKHG3A1L390 1219 aa15.47■□□□□ 0.07
LRRC46-204ENST00000584580 C14orf37Q86TY3 774 aa15.47■□□□□ 0.07
LRRC46-204ENST00000584580 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
LRRC46-204ENST00000584580 POLR3AO14802 1390 aaPredicted RBP15.46■□□□□ 0.07
LRRC46-204ENST00000584580 FBLN1P23142 703 aa15.46■□□□□ 0.07
LRRC46-204ENST00000584580 NKTRP30414 1462 aaKnown RBP15.45■□□□□ 0.06
LRRC46-204ENST00000584580 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
LRRC46-204ENST00000584580 CCDC146Q8IYE0 955 aa15.44■□□□□ 0.06
LRRC46-204ENST00000584580 NGDNQ8NEJ9 315 aaKnown RBP15.44■□□□□ 0.06
LRRC46-204ENST00000584580 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
LRRC46-204ENST00000584580 TOPAZ1Q8N9V7 1692 aa15.43■□□□□ 0.06
LRRC46-204ENST00000584580 PROSER2Q86WR7 435 aaPredicted RBP15.43■□□□□ 0.06
LRRC46-204ENST00000584580 KIF20BQ96Q89 1820 aa15.42■□□□□ 0.06
LRRC46-204ENST00000584580 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
LRRC46-204ENST00000584580 ITSN1Q15811 1721 aa15.42■□□□□ 0.06
LRRC46-204ENST00000584580 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
LRRC46-204ENST00000584580 COG3Q96JB2 828 aa15.41■□□□□ 0.06
LRRC46-204ENST00000584580 INSRP06213 1382 aa15.41■□□□□ 0.06
LRRC46-204ENST00000584580 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
LRRC46-204ENST00000584580 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms