RNA–Protein interactions for RNA: ENST00000582951.5

CUEDC1-211, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-211ENST00000582951 SIRT1Q96EB6 747 aa21.49■■□□□ 1.03
CUEDC1-211ENST00000582951 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
CUEDC1-211ENST00000582951 NINLQ9Y2I6 1382 aa21.47■■□□□ 1.03
CUEDC1-211ENST00000582951 SAFB2Q14151 953 aaKnown RBP eCLIP21.46■■□□□ 1.03
CUEDC1-211ENST00000582951 USP32Q8NFA0 1604 aa21.45■■□□□ 1.02
CUEDC1-211ENST00000582951 KNSTRNQ9Y448 316 aa21.45■■□□□ 1.02
CUEDC1-211ENST00000582951 TBX22Q9Y458 520 aa21.45■■□□□ 1.02
CUEDC1-211ENST00000582951 XRN1Q8IZH2 1706 aaKnown RBP21.45■■□□□ 1.02
CUEDC1-211ENST00000582951 MINK1Q8N4C8 1332 aaPredicted RBP21.45■■□□□ 1.02
CUEDC1-211ENST00000582951 ATAD2Q6PL18 1390 aa21.45■■□□□ 1.02
CUEDC1-211ENST00000582951 NPC1L1Q9UHC9 1359 aa21.45■■□□□ 1.02
CUEDC1-211ENST00000582951 MYBBP1AQ9BQG0 1328 aaKnown RBP21.44■■□□□ 1.02
CUEDC1-211ENST00000582951 ADGRB2O60241 1585 aa21.44■■□□□ 1.02
CUEDC1-211ENST00000582951 PLEKHH1Q9ULM0 1364 aa21.43■■□□□ 1.02
CUEDC1-211ENST00000582951 PIK3R4Q99570 1358 aa21.42■■□□□ 1.02
CUEDC1-211ENST00000582951 MRS2Q9HD23 443 aa21.42■■□□□ 1.02
CUEDC1-211ENST00000582951 PTCH1Q13635 1447 aa21.41■■□□□ 1.02
CUEDC1-211ENST00000582951 ANKLE2Q86XL3 938 aa21.41■■□□□ 1.02
CUEDC1-211ENST00000582951 PTPRUQ92729 1446 aa21.4■■□□□ 1.02
CUEDC1-211ENST00000582951 BRD4O60885 1362 aaPredicted RBP21.4■■□□□ 1.02
CUEDC1-211ENST00000582951 SRPK2P78362 688 aaKnown RBP21.4■■□□□ 1.02
CUEDC1-211ENST00000582951 SLC26A8Q96RN1 970 aa21.4■■□□□ 1.02
CUEDC1-211ENST00000582951 CNGB1Q14028 1251 aaPredicted RBP21.39■■□□□ 1.01
CUEDC1-211ENST00000582951 WAPLQ7Z5K2 1190 aa21.39■■□□□ 1.01
CUEDC1-211ENST00000582951 TMC1Q8TDI8 760 aa21.39■■□□□ 1.01
CUEDC1-211ENST00000582951 CABP2Q9NPB3 220 aa21.39■■□□□ 1.01
CUEDC1-211ENST00000582951 ANKRD36BQ8N2N9 1353 aa21.38■■□□□ 1.01
CUEDC1-211ENST00000582951 ROBO2Q9HCK4 1378 aa21.38■■□□□ 1.01
CUEDC1-211ENST00000582951 AMER1Q5JTC6 1135 aaPredicted RBP21.38■■□□□ 1.01
CUEDC1-211ENST00000582951 CC2D1BQ5T0F9 858 aaKnown RBP21.37■■□□□ 1.01
CUEDC1-211ENST00000582951 CHD2O14647 1828 aaKnown RBP21.36■■□□□ 1.01
CUEDC1-211ENST00000582951 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.36■■□□□ 1.01
CUEDC1-211ENST00000582951 CCDC184Q52MB2 194 aa21.36■■□□□ 1.01
CUEDC1-211ENST00000582951 CDK19Q9BWU1 502 aa21.36■■□□□ 1.01
CUEDC1-211ENST00000582951 NSD3Q9BZ95 1437 aa21.36■■□□□ 1.01
CUEDC1-211ENST00000582951 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
CUEDC1-211ENST00000582951 SLC12A5Q9H2X9 1139 aa21.35■■□□□ 1.01
CUEDC1-211ENST00000582951 NPHP4O75161 1426 aaPredicted RBP21.34■■□□□ 1.01
CUEDC1-211ENST00000582951 CARD14Q9BXL6 1004 aa21.33■■□□□ 1.01
CUEDC1-211ENST00000582951 ATP7BP35670 1465 aa21.32■■□□□ 1
CUEDC1-211ENST00000582951 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
CUEDC1-211ENST00000582951 AMOTL2Q9Y2J4 779 aa21.32■■□□□ 1
CUEDC1-211ENST00000582951 TOPAZ1Q8N9V7 1692 aa21.31■■□□□ 1
CUEDC1-211ENST00000582951 ANKRD26Q9UPS8 1709 aa21.3■■□□□ 1
CUEDC1-211ENST00000582951 TERF2IPQ9NYB0 399 aa21.3■■□□□ 1
CUEDC1-211ENST00000582951 A0A1W2PP64 1363 aa21.3■■□□□ 1
CUEDC1-211ENST00000582951 NSD2O96028 1365 aa21.3■■□□□ 1
CUEDC1-211ENST00000582951 ITSN1Q15811 1721 aa21.29■■□□□ 1
CUEDC1-211ENST00000582951 CD163L1Q9NR16 1453 aa21.29■■□□□ 1
CUEDC1-211ENST00000582951 KIF20BQ96Q89 1820 aa21.28■■□□□ 1
CUEDC1-211ENST00000582951 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
CUEDC1-211ENST00000582951 AKAP12Q02952 1782 aa21.27■■□□□ 1
CUEDC1-211ENST00000582951 NWD1Q149M9 1564 aa21.27■□□□□ 0.99
CUEDC1-211ENST00000582951 CDC42BPGQ6DT37 1551 aa21.27■□□□□ 0.99
CUEDC1-211ENST00000582951 HDGFL2Q7Z4V5 671 aaPredicted RBP21.26■□□□□ 0.99
CUEDC1-211ENST00000582951 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
CUEDC1-211ENST00000582951 MON2Q7Z3U7 1717 aa21.26■□□□□ 0.99
CUEDC1-211ENST00000582951 PPIP5K1Q6PFW1 1433 aa21.25■□□□□ 0.99
CUEDC1-211ENST00000582951 LMTK3Q96Q04 1460 aa21.25■□□□□ 0.99
CUEDC1-211ENST00000582951 PPP2R1AP30153 589 aa21.24■□□□□ 0.99
CUEDC1-211ENST00000582951 PNISRQ8TF01 805 aaKnown RBP21.23■□□□□ 0.99
CUEDC1-211ENST00000582951 NALCNQ8IZF0 1738 aa21.22■□□□□ 0.99
CUEDC1-211ENST00000582951 FMN2Q9NZ56 1722 aa21.22■□□□□ 0.99
CUEDC1-211ENST00000582951 CABP1Q9NZU7 370 aa21.22■□□□□ 0.99
CUEDC1-211ENST00000582951 KCNA6P17658 529 aa21.21■□□□□ 0.99
CUEDC1-211ENST00000582951 NUDT16Q96DE0 195 aaKnown RBP21.21■□□□□ 0.99
CUEDC1-211ENST00000582951 HNRNPUQ00839 825 aaKnown RBP eCLIP21.2■□□□□ 0.98
CUEDC1-211ENST00000582951 CCDC61Q9Y6R9 512 aa21.2■□□□□ 0.98
CUEDC1-211ENST00000582951 NCKAP5LQ9HCH0 1330 aa21.2■□□□□ 0.98
CUEDC1-211ENST00000582951 CPSF1Q10570 1443 aaKnown RBP21.2■□□□□ 0.98
CUEDC1-211ENST00000582951 MORC1Q86VD1 984 aa21.18■□□□□ 0.98
CUEDC1-211ENST00000582951 INSRP06213 1382 aa21.18■□□□□ 0.98
CUEDC1-211ENST00000582951 PRR36Q9H6K5 1346 aa21.17■□□□□ 0.98
CUEDC1-211ENST00000582951 EDC4Q6P2E9 1401 aaKnown RBP21.17■□□□□ 0.98
CUEDC1-211ENST00000582951 NKTRP30414 1462 aaKnown RBP21.16■□□□□ 0.98
CUEDC1-211ENST00000582951 ANKARQ7Z5J8 1434 aa21.16■□□□□ 0.98
CUEDC1-211ENST00000582951 NRKQ7Z2Y5 1582 aa21.15■□□□□ 0.98
CUEDC1-211ENST00000582951 HSPA2P54652 639 aa21.15■□□□□ 0.98
CUEDC1-211ENST00000582951 ADGRL3Q9HAR2 1447 aa21.14■□□□□ 0.98
CUEDC1-211ENST00000582951 RGPD8O14715 1765 aaPredicted RBP21.14■□□□□ 0.97
CUEDC1-211ENST00000582951 POLR3AO14802 1390 aaPredicted RBP21.11■□□□□ 0.97
CUEDC1-211ENST00000582951 ZBED9Q6R2W3 1325 aa21.11■□□□□ 0.97
CUEDC1-211ENST00000582951 PLEKHG3A1L390 1219 aa21.11■□□□□ 0.97
CUEDC1-211ENST00000582951 BLMP54132 1417 aaPredicted RBP21.11■□□□□ 0.97
CUEDC1-211ENST00000582951 ZNF692Q9BU19 519 aaPredicted RBP21.1■□□□□ 0.97
CUEDC1-211ENST00000582951 FYB1O15117 783 aa21.09■□□□□ 0.97
CUEDC1-211ENST00000582951 STRCQ7RTU9 1775 aa21.08■□□□□ 0.97
CUEDC1-211ENST00000582951 ILDR2Q71H61 639 aa21.08■□□□□ 0.97
CUEDC1-211ENST00000582951 SHPRHQ149N8 1683 aa21.08■□□□□ 0.96
CUEDC1-211ENST00000582951 GGNBP2Q9H3C7 697 aa21.07■□□□□ 0.96
CUEDC1-211ENST00000582951 USP6P35125 1406 aa21.06■□□□□ 0.96
CUEDC1-211ENST00000582951 SOCS7O14512 581 aa21.06■□□□□ 0.96
CUEDC1-211ENST00000582951 WDR43Q15061 677 aaKnown RBP eCLIP21.06■□□□□ 0.96
CUEDC1-211ENST00000582951 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
CUEDC1-211ENST00000582951 ACEP12821 1306 aa21.04■□□□□ 0.96
CUEDC1-211ENST00000582951 NUTM2FA1L443 756 aa21.04■□□□□ 0.96
CUEDC1-211ENST00000582951 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
CUEDC1-211ENST00000582951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.03■□□□□ 0.96
CUEDC1-211ENST00000582951 CFAP53Q96M91 514 aa21.03■□□□□ 0.96
CUEDC1-211ENST00000582951 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms