RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 ANP32CO43423 234 aa15.22■□□□□ 0.03
SKA2-206ENST00000581068 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
SKA2-206ENST00000581068 AMOTL2Q9Y2J4 779 aa15.22■□□□□ 0.03
SKA2-206ENST00000581068 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
SKA2-206ENST00000581068 PTPRUQ92729 1446 aa15.21■□□□□ 0.03
SKA2-206ENST00000581068 CPS1P31327 1500 aa15.21■□□□□ 0.03
SKA2-206ENST00000581068 MINK1Q8N4C8 1332 aaPredicted RBP15.2■□□□□ 0.02
SKA2-206ENST00000581068 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
SKA2-206ENST00000581068 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
SKA2-206ENST00000581068 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
SKA2-206ENST00000581068 HSPA2P54652 639 aa15.17■□□□□ 0.02
SKA2-206ENST00000581068 PANK3Q9H999 370 aa15.17■□□□□ 0.02
SKA2-206ENST00000581068 LMTK3Q96Q04 1460 aa15.16■□□□□ 0.02
SKA2-206ENST00000581068 SRPK2P78362 688 aaKnown RBP15.16■□□□□ 0.02
SKA2-206ENST00000581068 CDK19Q9BWU1 502 aa15.16■□□□□ 0.02
SKA2-206ENST00000581068 PTCH1Q13635 1447 aa15.16■□□□□ 0.02
SKA2-206ENST00000581068 CABP2Q9NPB3 220 aa15.15■□□□□ 0.02
SKA2-206ENST00000581068 XRN1Q8IZH2 1706 aaKnown RBP15.14■□□□□ 0.01
SKA2-206ENST00000581068 WASLO00401 505 aaPredicted RBP15.14■□□□□ 0.01
SKA2-206ENST00000581068 KCNA6P17658 529 aa15.14■□□□□ 0.01
SKA2-206ENST00000581068 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
SKA2-206ENST00000581068 ATAD2Q6PL18 1390 aa15.13■□□□□ 0.01
SKA2-206ENST00000581068 PER1O15534 1290 aaPredicted RBP15.13■□□□□ 0.01
SKA2-206ENST00000581068 CHD2O14647 1828 aaKnown RBP15.13■□□□□ 0.01
SKA2-206ENST00000581068 TMC1Q8TDI8 760 aa15.12■□□□□ 0.01
SKA2-206ENST00000581068 MYOM1P52179 1685 aa15.12■□□□□ 0.01
SKA2-206ENST00000581068 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
SKA2-206ENST00000581068 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
SKA2-206ENST00000581068 SLC12A5Q9H2X9 1139 aa15.1■□□□□ 0.01
SKA2-206ENST00000581068 PRKRIP1Q9H875 184 aaPredicted RBP15.1■□□□□ 0.01
SKA2-206ENST00000581068 KNSTRNQ9Y448 316 aa15.1■□□□□ 0.01
SKA2-206ENST00000581068 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
SKA2-206ENST00000581068 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
SKA2-206ENST00000581068 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0
SKA2-206ENST00000581068 RALBP1Q15311 655 aa15.07■□□□□ 0
SKA2-206ENST00000581068 NUDT16Q96DE0 195 aaKnown RBP15.07■□□□□ 0
SKA2-206ENST00000581068 NWD1Q149M9 1564 aa15.07■□□□□ 0
SKA2-206ENST00000581068 TERF2IPQ9NYB0 399 aa15.06■□□□□ 0
SKA2-206ENST00000581068 ANKRD36BQ8N2N9 1353 aa15.06■□□□□ 0
SKA2-206ENST00000581068 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ -0
SKA2-206ENST00000581068 PROSER2Q86WR7 435 aaPredicted RBP15.05■□□□□ -0
SKA2-206ENST00000581068 CARD14Q9BXL6 1004 aa15.05■□□□□ -0
SKA2-206ENST00000581068 CABP1Q9NZU7 370 aa15.05■□□□□ -0
SKA2-206ENST00000581068 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
SKA2-206ENST00000581068 STRCQ7RTU9 1775 aa15.05■□□□□ -0
SKA2-206ENST00000581068 NPC1L1Q9UHC9 1359 aa15.04■□□□□ -0
SKA2-206ENST00000581068 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
SKA2-206ENST00000581068 NKTRP30414 1462 aaKnown RBP15.03■□□□□ -0
SKA2-206ENST00000581068 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
SKA2-206ENST00000581068 PRR36Q9H6K5 1346 aa15.02■□□□□ -0
SKA2-206ENST00000581068 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
SKA2-206ENST00000581068 PPIP5K1Q6PFW1 1433 aa15.01□□□□□ -0.01
SKA2-206ENST00000581068 NSD3Q9BZ95 1437 aa15.01□□□□□ -0.01
SKA2-206ENST00000581068 ATP7BP35670 1465 aa15.01□□□□□ -0.01
SKA2-206ENST00000581068 ADGRL3Q9HAR2 1447 aa15□□□□□ -0.01
SKA2-206ENST00000581068 A0A1W2PP64 1363 aa15□□□□□ -0.01
SKA2-206ENST00000581068 PARD3Q8TEW0 1356 aa15□□□□□ -0.01
SKA2-206ENST00000581068 C14orf37Q86TY3 774 aa15□□□□□ -0.01
SKA2-206ENST00000581068 ANKARQ7Z5J8 1434 aa15□□□□□ -0.01
SKA2-206ENST00000581068 MYBBP1AQ9BQG0 1328 aaKnown RBP14.99□□□□□ -0.01
SKA2-206ENST00000581068 PLEKHG3A1L390 1219 aa14.99□□□□□ -0.01
SKA2-206ENST00000581068 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
SKA2-206ENST00000581068 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
SKA2-206ENST00000581068 NCOA3Q9Y6Q9 1424 aa14.99□□□□□ -0.01
SKA2-206ENST00000581068 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
SKA2-206ENST00000581068 CGNL1Q0VF96 1302 aa14.98□□□□□ -0.01
SKA2-206ENST00000581068 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
SKA2-206ENST00000581068 RBM33Q96EV2 1170 aaKnown RBP14.98□□□□□ -0.01
SKA2-206ENST00000581068 NALCNQ8IZF0 1738 aa14.97□□□□□ -0.01
SKA2-206ENST00000581068 USP32Q8NFA0 1604 aa14.97□□□□□ -0.01
SKA2-206ENST00000581068 CPSF1Q10570 1443 aaKnown RBP14.97□□□□□ -0.01
SKA2-206ENST00000581068 FMN2Q9NZ56 1722 aa14.97□□□□□ -0.01
SKA2-206ENST00000581068 C19orf44Q9H6X5 657 aa14.96□□□□□ -0.01
SKA2-206ENST00000581068 NSD2O96028 1365 aa14.96□□□□□ -0.02
SKA2-206ENST00000581068 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
SKA2-206ENST00000581068 TOPAZ1Q8N9V7 1692 aa14.95□□□□□ -0.02
SKA2-206ENST00000581068 STRCP1A6NGW2 1772 aa14.95□□□□□ -0.02
SKA2-206ENST00000581068 TMEM94Q12767 1356 aa14.95□□□□□ -0.02
SKA2-206ENST00000581068 ACEP12821 1306 aa14.94□□□□□ -0.02
SKA2-206ENST00000581068 MORC1Q86VD1 984 aa14.94□□□□□ -0.02
SKA2-206ENST00000581068 NLRP13Q86W25 1043 aa14.94□□□□□ -0.02
SKA2-206ENST00000581068 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
SKA2-206ENST00000581068 ITSN1Q15811 1721 aa14.94□□□□□ -0.02
SKA2-206ENST00000581068 EDC4Q6P2E9 1401 aaKnown RBP14.93□□□□□ -0.02
SKA2-206ENST00000581068 CCDC184Q52MB2 194 aa14.93□□□□□ -0.02
SKA2-206ENST00000581068 ZNF335Q9H4Z2 1342 aaPredicted RBP14.92□□□□□ -0.02
SKA2-206ENST00000581068 FYB1O15117 783 aa14.92□□□□□ -0.02
SKA2-206ENST00000581068 PPP2R1AP30153 589 aa14.92□□□□□ -0.02
SKA2-206ENST00000581068 NGDNQ8NEJ9 315 aaKnown RBP14.92□□□□□ -0.02
SKA2-206ENST00000581068 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
SKA2-206ENST00000581068 AKAP12Q02952 1782 aa14.91□□□□□ -0.02
SKA2-206ENST00000581068 POLR3AO14802 1390 aaPredicted RBP14.91□□□□□ -0.02
SKA2-206ENST00000581068 ATF3P18847 181 aa14.91□□□□□ -0.02
SKA2-206ENST00000581068 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
SKA2-206ENST00000581068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.9□□□□□ -0.02
SKA2-206ENST00000581068 GGNBP2Q9H3C7 697 aa14.9□□□□□ -0.02
SKA2-206ENST00000581068 DCCP43146 1447 aa14.9□□□□□ -0.02
SKA2-206ENST00000581068 MON2Q7Z3U7 1717 aa14.89□□□□□ -0.03
SKA2-206ENST00000581068 MSH6P52701 1360 aa14.89□□□□□ -0.03
SKA2-206ENST00000581068 RGPD8O14715 1765 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms