RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SEPT12Q8IYM1 358 aa20.38■□□□□ 0.85
CDK5RAP3-213ENST00000579605 ROBO2Q9HCK4 1378 aa20.37■□□□□ 0.85
CDK5RAP3-213ENST00000579605 HRCP23327 699 aa20.37■□□□□ 0.85
CDK5RAP3-213ENST00000579605 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
CDK5RAP3-213ENST00000579605 NPHP3Q7Z494 1330 aa20.36■□□□□ 0.85
CDK5RAP3-213ENST00000579605 NUTM2FA1L443 756 aa20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 LAMC1P11047 1609 aa20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 COL22A1Q8NFW1 1626 aaPredicted RBP20.32■□□□□ 0.84
CDK5RAP3-213ENST00000579605 LRP5O75197 1615 aa20.31■□□□□ 0.84
CDK5RAP3-213ENST00000579605 BAG6P46379 1132 aa20.31■□□□□ 0.84
CDK5RAP3-213ENST00000579605 KRT27Q7Z3Y8 459 aa20.31■□□□□ 0.84
CDK5RAP3-213ENST00000579605 GLI3P10071 1580 aa20.3■□□□□ 0.84
CDK5RAP3-213ENST00000579605 A0A0G2JS52 829 aa20.3■□□□□ 0.84
CDK5RAP3-213ENST00000579605 MYT1Q01538 1121 aa20.3■□□□□ 0.84
CDK5RAP3-213ENST00000579605 ITGAEP38570 1179 aa20.29■□□□□ 0.84
CDK5RAP3-213ENST00000579605 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
CDK5RAP3-213ENST00000579605 IQGAP3Q86VI3 1631 aa20.28■□□□□ 0.84
CDK5RAP3-213ENST00000579605 R3HDM1Q15032 1099 aaKnown RBP20.28■□□□□ 0.84
CDK5RAP3-213ENST00000579605 PXDNQ92626 1479 aa20.27■□□□□ 0.84
CDK5RAP3-213ENST00000579605 SLIT2O94813 1529 aa20.27■□□□□ 0.83
CDK5RAP3-213ENST00000579605 EN1Q05925 392 aaPredicted RBP20.26■□□□□ 0.83
CDK5RAP3-213ENST00000579605 VPS72Q15906 364 aa20.26■□□□□ 0.83
CDK5RAP3-213ENST00000579605 YY1P25490 414 aa20.25■□□□□ 0.83
CDK5RAP3-213ENST00000579605 LRPPRCP42704 1394 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-213ENST00000579605 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
CDK5RAP3-213ENST00000579605 VGFO15240 615 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-213ENST00000579605 CABLES1Q8TDN4 633 aa20.23■□□□□ 0.83
CDK5RAP3-213ENST00000579605 HFM1A2PYH4 1435 aa20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 BRWD3Q6RI45 1802 aa20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 SPATA31A3Q5VYP0 1347 aa20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 KRT28Q7Z3Y7 464 aa20.21■□□□□ 0.83
CDK5RAP3-213ENST00000579605 MARF1Q9Y4F3 1742 aaKnown RBP20.21■□□□□ 0.83
CDK5RAP3-213ENST00000579605 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
CDK5RAP3-213ENST00000579605 FAM182BQ5T319 152 aa20.2■□□□□ 0.82
CDK5RAP3-213ENST00000579605 STK26Q9P289 416 aa20.2■□□□□ 0.82
CDK5RAP3-213ENST00000579605 FAM98CQ17RN3 349 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 WAPLQ7Z5K2 1190 aa20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
CDK5RAP3-213ENST00000579605 NAIPQ13075 1403 aa20.16■□□□□ 0.82
CDK5RAP3-213ENST00000579605 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
CDK5RAP3-213ENST00000579605 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
CDK5RAP3-213ENST00000579605 FAM83GA6ND36 823 aa20.13■□□□□ 0.81
CDK5RAP3-213ENST00000579605 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
CDK5RAP3-213ENST00000579605 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
CDK5RAP3-213ENST00000579605 PSME1Q06323 249 aa20.11■□□□□ 0.81
CDK5RAP3-213ENST00000579605 USP32Q8NFA0 1604 aa20.11■□□□□ 0.81
CDK5RAP3-213ENST00000579605 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
CDK5RAP3-213ENST00000579605 RPGRIP1LQ68CZ1 1315 aa20.09■□□□□ 0.81
CDK5RAP3-213ENST00000579605 BTG4Q9NY30 223 aa20.08■□□□□ 0.81
CDK5RAP3-213ENST00000579605 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.8
CDK5RAP3-213ENST00000579605 TMEM132EQ6IEE7 984 aa20.07■□□□□ 0.8
CDK5RAP3-213ENST00000579605 PHF8Q9UPP1 1060 aa20.07■□□□□ 0.8
CDK5RAP3-213ENST00000579605 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
CDK5RAP3-213ENST00000579605 DCAF8L1A6NGE4 600 aa20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 TRIM37O94972 964 aa20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 CAMKK2Q96RR4 588 aa20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 PPP1R1BQ9UD71 204 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 ADGRF5Q8IZF2 1346 aa20.03■□□□□ 0.8
CDK5RAP3-213ENST00000579605 APBA3O96018 575 aa20.03■□□□□ 0.8
CDK5RAP3-213ENST00000579605 KIF1BO60333 1816 aa20.03■□□□□ 0.8
CDK5RAP3-213ENST00000579605 PLCH1Q4KWH8 1693 aa20.02■□□□□ 0.8
CDK5RAP3-213ENST00000579605 RGL3Q3MIN7 710 aa20■□□□□ 0.79
CDK5RAP3-213ENST00000579605 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
CDK5RAP3-213ENST00000579605 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SPATA31A5Q5VU36 1347 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SPATA31A7Q8IWB4 1347 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SBNO1A3KN83 1393 aa19.98■□□□□ 0.79
CDK5RAP3-213ENST00000579605 DISP2A7MBM2 1401 aa19.98■□□□□ 0.79
CDK5RAP3-213ENST00000579605 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 RGPD1P0DJD0 1748 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 NBPF14Q5TI25 921 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SAFB2Q14151 953 aaKnown RBP eCLIP19.96■□□□□ 0.79
CDK5RAP3-213ENST00000579605 FAM196AQ6ZSG2 479 aa19.96■□□□□ 0.79
CDK5RAP3-213ENST00000579605 KIF1AQ12756 1690 aa19.96■□□□□ 0.79
CDK5RAP3-213ENST00000579605 TECPR2O15040 1411 aa19.95■□□□□ 0.78
CDK5RAP3-213ENST00000579605 SPON1Q9HCB6 807 aa19.95■□□□□ 0.78
CDK5RAP3-213ENST00000579605 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-213ENST00000579605 FMN2Q9NZ56 1722 aa19.93■□□□□ 0.78
CDK5RAP3-213ENST00000579605 KCNQ2O43526 872 aa19.92■□□□□ 0.78
CDK5RAP3-213ENST00000579605 STRN4Q9NRL3 753 aa19.91■□□□□ 0.78
CDK5RAP3-213ENST00000579605 RRBP1Q9P2E9 1410 aaKnown RBP19.91■□□□□ 0.78
CDK5RAP3-213ENST00000579605 PPLO60437 1756 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 SENP3-EIF4A1A0A087X0R7 540 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 PRDM11Q9NQV5 511 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 TNS1Q9HBL0 1735 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-213ENST00000579605 NRAPQ86VF7 1730 aa19.88■□□□□ 0.77
CDK5RAP3-213ENST00000579605 PARD3Q8TEW0 1356 aa19.88■□□□□ 0.77
CDK5RAP3-213ENST00000579605 PDE3BQ13370 1112 aa19.88■□□□□ 0.77
CDK5RAP3-213ENST00000579605 ABCA3Q99758 1704 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms