RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 CAMSAP2Q08AD1 1489 aa12.63□□□□□ -0.39
MSI2-209ENST00000579483 APAF1O14727 1248 aa12.63□□□□□ -0.39
MSI2-209ENST00000579483 RUFY2Q8WXA3 655 aa12.63□□□□□ -0.39
MSI2-209ENST00000579483 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
MSI2-209ENST00000579483 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
MSI2-209ENST00000579483 FAM135AQ9P2D6 1515 aa12.63□□□□□ -0.39
MSI2-209ENST00000579483 HMOX1P09601 288 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 SYNE3Q6ZMZ3 975 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 AMOTL2Q9Y2J4 779 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 MSH6P52701 1360 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 CCDC30Q5VVM6 783 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 FBXW7Q969H0 707 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 NUDT16Q96DE0 195 aaKnown RBP12.62□□□□□ -0.39
MSI2-209ENST00000579483 CWC22Q9HCG8 908 aaKnown RBP12.62□□□□□ -0.39
MSI2-209ENST00000579483 WDR7Q9Y4E6 1490 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 NGLY1Q96IV0 654 aa12.62□□□□□ -0.39
MSI2-209ENST00000579483 MARCH6O60337 910 aa12.61□□□□□ -0.39
MSI2-209ENST00000579483 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
MSI2-209ENST00000579483 IFIT2P09913 472 aaKnown RBP12.61□□□□□ -0.39
MSI2-209ENST00000579483 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
MSI2-209ENST00000579483 CEBPAP49715 358 aaPredicted RBP12.61□□□□□ -0.39
MSI2-209ENST00000579483 AKAP17AQ02040 695 aaKnown RBP12.61□□□□□ -0.39
MSI2-209ENST00000579483 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
MSI2-209ENST00000579483 PLCH2O75038 1416 aa12.61□□□□□ -0.39
MSI2-209ENST00000579483 MTHFSP49914 203 aa12.6□□□□□ -0.39
MSI2-209ENST00000579483 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
MSI2-209ENST00000579483 UBAP1LF5GYI3 381 aa12.6□□□□□ -0.39
MSI2-209ENST00000579483 PTMSP20962 102 aa12.6□□□□□ -0.39
MSI2-209ENST00000579483 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
MSI2-209ENST00000579483 CCDC7Q96M83 1385 aa12.6□□□□□ -0.39
MSI2-209ENST00000579483 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
MSI2-209ENST00000579483 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
MSI2-209ENST00000579483 AAMPQ13685 434 aa12.59□□□□□ -0.39
MSI2-209ENST00000579483 PBRM1Q86U86 1689 aa12.58□□□□□ -0.39
MSI2-209ENST00000579483 EIF4G3O43432 1585 aaKnown RBP12.58□□□□□ -0.4
MSI2-209ENST00000579483 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.4
MSI2-209ENST00000579483 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.4
MSI2-209ENST00000579483 IDI1Q13907 227 aa12.58□□□□□ -0.4
MSI2-209ENST00000579483 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
MSI2-209ENST00000579483 PPP1R1BQ9UD71 204 aaPredicted RBP12.57□□□□□ -0.4
MSI2-209ENST00000579483 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
MSI2-209ENST00000579483 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
MSI2-209ENST00000579483 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
MSI2-209ENST00000579483 CHAF1AQ13111 956 aaPredicted RBP12.57□□□□□ -0.4
MSI2-209ENST00000579483 RASSF8Q8NHQ8 419 aa12.57□□□□□ -0.4
MSI2-209ENST00000579483 AIMP1Q12904 312 aaKnown RBP12.56□□□□□ -0.4
MSI2-209ENST00000579483 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 ERC2O15083 957 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 TCEAL9Q9UHQ7 104 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 GNAI3P08754 354 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 TRDNQ13061 729 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 UHRF1BP1LA0JNW5 1464 aa12.56□□□□□ -0.4
MSI2-209ENST00000579483 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
MSI2-209ENST00000579483 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
MSI2-209ENST00000579483 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
MSI2-209ENST00000579483 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
MSI2-209ENST00000579483 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
MSI2-209ENST00000579483 STARD3NLO95772 234 aa12.55□□□□□ -0.4
MSI2-209ENST00000579483 UBTFL1P0CB47 393 aaPredicted RBP12.55□□□□□ -0.4
MSI2-209ENST00000579483 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
MSI2-209ENST00000579483 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
MSI2-209ENST00000579483 PCF11O94913 1555 aaKnown RBP12.54□□□□□ -0.4
MSI2-209ENST00000579483 ST18O60284 1047 aa12.54□□□□□ -0.4
MSI2-209ENST00000579483 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
MSI2-209ENST00000579483 BRD4O60885 1362 aaPredicted RBP12.54□□□□□ -0.4
MSI2-209ENST00000579483 NBR1Q14596 966 aa12.54□□□□□ -0.4
MSI2-209ENST00000579483 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
MSI2-209ENST00000579483 ABCC5O15440 1437 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 APPP05067 770 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 ZKSCAN1P17029 563 aaPredicted RBP12.53□□□□□ -0.4
MSI2-209ENST00000579483 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 A2MP01023 1474 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 RILPL2Q969X0 211 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 MFAP1P55081 439 aaKnown RBP12.53□□□□□ -0.4
MSI2-209ENST00000579483 UGGT2Q9NYU1 1516 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
MSI2-209ENST00000579483 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.4
MSI2-209ENST00000579483 ANKRD45Q5TZF3 282 aa12.52□□□□□ -0.4
MSI2-209ENST00000579483 ERICH2A1L162 156 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 WASLO00401 505 aaPredicted RBP12.52□□□□□ -0.41
MSI2-209ENST00000579483 KRT28Q7Z3Y7 464 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 TBC1D2BQ9UPU7 963 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 ATP10BO94823 1461 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 NUP160Q12769 1436 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 GBP4Q96PP9 640 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.41
MSI2-209ENST00000579483 RAPGEF6Q8TEU7 1601 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 KDM5BQ9UGL1 1544 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
MSI2-209ENST00000579483 EXOC5O00471 708 aa12.51□□□□□ -0.41
MSI2-209ENST00000579483 FOXO3O43524 673 aa12.51□□□□□ -0.41
MSI2-209ENST00000579483 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
MSI2-209ENST00000579483 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
MSI2-209ENST00000579483 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms