RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DNAJC5Q9H3Z4 198 aa6.4□□□□□ -1.38
SMARCE1-215ENST00000578995 ARAP1Q96P48 1450 aa6.4□□□□□ -1.39
SMARCE1-215ENST00000578995 DISP1Q96F81 1524 aa6.4□□□□□ -1.39
SMARCE1-215ENST00000578995 MAP3K7O43318 606 aa6.39□□□□□ -1.39
SMARCE1-215ENST00000578995 SLF2Q8IX21 1173 aa6.39□□□□□ -1.39
SMARCE1-215ENST00000578995 CERKQ8TCT0 537 aa6.39□□□□□ -1.39
SMARCE1-215ENST00000578995 SLC4A3P48751 1232 aa6.38□□□□□ -1.39
SMARCE1-215ENST00000578995 TSR1Q2NL82 804 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-215ENST00000578995 CHMP7Q8WUX9 453 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-215ENST00000578995 PCDHB3Q9Y5E6 796 aa6.38□□□□□ -1.39
SMARCE1-215ENST00000578995 GOLGA3Q08378 1498 aa6.38□□□□□ -1.39
SMARCE1-215ENST00000578995 LRRIQ1Q96JM4 1722 aa6.38□□□□□ -1.39
SMARCE1-215ENST00000578995 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
SMARCE1-215ENST00000578995 DDX12PQ92771 950 aa6.37□□□□□ -1.39
SMARCE1-215ENST00000578995 FAM198AQ9UFP1 575 aa6.37□□□□□ -1.39
SMARCE1-215ENST00000578995 PPEF1O14829 653 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-215ENST00000578995 SMCPP49901 116 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-215ENST00000578995 ADCY10Q96PN6 1610 aa6.36□□□□□ -1.39
SMARCE1-215ENST00000578995 S1PR4O95977 384 aa6.35□□□□□ -1.39
SMARCE1-215ENST00000578995 CHGAP10645 457 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-215ENST00000578995 FOXC1Q12948 553 aa6.35□□□□□ -1.39
SMARCE1-215ENST00000578995 NBR1Q14596 966 aa6.35□□□□□ -1.39
SMARCE1-215ENST00000578995 NKX1-1Q15270 411 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-215ENST00000578995 ZSCAN1Q8NBB4 408 aa6.35□□□□□ -1.39
SMARCE1-215ENST00000578995 EFCAB5A4FU69 1503 aa6.35□□□□□ -1.39
SMARCE1-215ENST00000578995 C3orf80F5H4A9 247 aa6.34□□□□□ -1.39
SMARCE1-215ENST00000578995 NUDT18Q6ZVK8 323 aa6.34□□□□□ -1.39
SMARCE1-215ENST00000578995 PKD2L1Q9P0L9 805 aa6.34□□□□□ -1.39
SMARCE1-215ENST00000578995 PRG4Q92954 1404 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-215ENST00000578995 ABCA8O94911 1581 aa6.33□□□□□ -1.4
SMARCE1-215ENST00000578995 DPYSL4O14531 572 aa6.33□□□□□ -1.4
SMARCE1-215ENST00000578995 SWT1Q5T5J6 900 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-215ENST00000578995 BLOC1S3Q6QNY0 202 aa6.33□□□□□ -1.4
SMARCE1-215ENST00000578995 SLC16A10Q8TF71 515 aa6.33□□□□□ -1.4
SMARCE1-215ENST00000578995 KIF13AQ9H1H9 1805 aa6.33□□□□□ -1.4
SMARCE1-215ENST00000578995 TLL1O43897 1013 aa6.32□□□□□ -1.4
SMARCE1-215ENST00000578995 FAM9AQ8IZU1 332 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-215ENST00000578995 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
SMARCE1-215ENST00000578995 TOR4AQ9NXH8 423 aa6.32□□□□□ -1.4
SMARCE1-215ENST00000578995 ARHGAP35Q9NRY4 1499 aa6.32□□□□□ -1.4
SMARCE1-215ENST00000578995 CYP4X1Q8N118 509 aa6.31□□□□□ -1.4
SMARCE1-215ENST00000578995 ZCCHC11Q5TAX3 1644 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-215ENST00000578995 RAPGEF6Q8TEU7 1601 aa6.3□□□□□ -1.4
SMARCE1-215ENST00000578995 CAMK2BQ13554 666 aa6.3□□□□□ -1.4
SMARCE1-215ENST00000578995 RBM27Q9P2N5 1060 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-215ENST00000578995 UHRF1BP1LA0JNW5 1464 aa6.29□□□□□ -1.4
SMARCE1-215ENST00000578995 SNRPBP14678 240 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-215ENST00000578995 TRIM47Q96LD4 638 aa6.29□□□□□ -1.4
SMARCE1-215ENST00000578995 ATP13A2Q9NQ11 1180 aa6.29□□□□□ -1.4
SMARCE1-215ENST00000578995 ABCC2Q92887 1545 aa6.29□□□□□ -1.4
SMARCE1-215ENST00000578995 TNIKQ9UKE5 1360 aa6.29□□□□□ -1.4
SMARCE1-215ENST00000578995 PCF11O94913 1555 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-215ENST00000578995 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-215ENST00000578995 PLA2G2CQ5R387 149 aa6.28□□□□□ -1.4
SMARCE1-215ENST00000578995 CARMIL2Q6F5E8 1435 aa6.27□□□□□ -1.41
SMARCE1-215ENST00000578995 MAPKBP1O60336 1514 aa6.27□□□□□ -1.41
SMARCE1-215ENST00000578995 ADH1BP00325 375 aa6.27□□□□□ -1.41
SMARCE1-215ENST00000578995 KIFC2Q96AC6 838 aa6.27□□□□□ -1.41
SMARCE1-215ENST00000578995 SLC6A16Q9GZN6 736 aa6.27□□□□□ -1.41
SMARCE1-215ENST00000578995 PLB1Q6P1J6 1458 aa6.27□□□□□ -1.41
SMARCE1-215ENST00000578995 CFAP43Q8NDM7 1665 aa6.26□□□□□ -1.41
SMARCE1-215ENST00000578995 FHOD3Q2V2M9 1422 aa6.26□□□□□ -1.41
SMARCE1-215ENST00000578995 KDM5BQ9UGL1 1544 aa6.26□□□□□ -1.41
SMARCE1-215ENST00000578995 GMPRP36959 345 aa6.26□□□□□ -1.41
SMARCE1-215ENST00000578995 RPIAP49247 311 aa6.26□□□□□ -1.41
SMARCE1-215ENST00000578995 NUP153P49790 1475 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-215ENST00000578995 PPRC1Q5VV67 1664 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-215ENST00000578995 CD2BP2O95400 341 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-215ENST00000578995 IRF7Q92985 503 aa6.25□□□□□ -1.41
SMARCE1-215ENST00000578995 DIP2BQ9P265 1576 aa6.25□□□□□ -1.41
SMARCE1-215ENST00000578995 HECW1Q76N89 1606 aa6.25□□□□□ -1.41
SMARCE1-215ENST00000578995 CEP162Q5TB80 1403 aa6.25□□□□□ -1.41
SMARCE1-215ENST00000578995 TTC24A2A3L6 582 aaPredicted RBP6.24□□□□□ -1.41
SMARCE1-215ENST00000578995 PTPRGP23470 1445 aa6.24□□□□□ -1.41
SMARCE1-215ENST00000578995 UACAQ9BZF9 1416 aa6.24□□□□□ -1.41
SMARCE1-215ENST00000578995 ACTN4O43707 911 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-215ENST00000578995 KMT5BQ4FZB7 885 aa6.23□□□□□ -1.41
SMARCE1-215ENST00000578995 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-215ENST00000578995 MAP3K4Q9Y6R4 1608 aa6.23□□□□□ -1.41
SMARCE1-215ENST00000578995 CLIP1P30622 1438 aa6.23□□□□□ -1.41
SMARCE1-215ENST00000578995 MAGI3Q5TCQ9 1506 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 LOC105371045A0A1W2PR82 267 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 NR1I2O75469 434 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 PDIA6Q15084 440 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 NPAS3Q8IXF0 933 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 KCTD17Q8N5Z5 321 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 GLI2P10070 1586 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 FYCO1Q9BQS8 1478 aa6.22□□□□□ -1.41
SMARCE1-215ENST00000578995 CDK13Q14004 1512 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-215ENST00000578995 SPDYE16A6NNV3 312 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-215ENST00000578995 GTPBP6O43824 516 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-215ENST00000578995 CYB5RLQ6IPT4 315 aa6.21□□□□□ -1.42
SMARCE1-215ENST00000578995 ATP10BO94823 1461 aa6.21□□□□□ -1.42
SMARCE1-215ENST00000578995 ABCA9Q8IUA7 1624 aa6.21□□□□□ -1.42
SMARCE1-215ENST00000578995 EPRSP07814 1512 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-215ENST00000578995 CDC42BPAQ5VT25 1732 aa6.2□□□□□ -1.42
SMARCE1-215ENST00000578995 FMN1Q68DA7 1419 aa6.2□□□□□ -1.42
SMARCE1-215ENST00000578995 CASKIN1Q8WXD9 1431 aa6.2□□□□□ -1.42
SMARCE1-215ENST00000578995 UBTFP17480 764 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-215ENST00000578995 KCNMA1Q12791 1236 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms